Ss1.1-Spl1-SPL01B040102.5
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CTGTGGGTTCATGTGGGATCAGGGTTTAACTGAGGTCTGCCCTCTCAGAGGCTTGCCAGA
GCCTTCCACCCCATTGGGCCCCCCAACTCGGAACCCCGGGGGGGACAGAGTATCCCCTGC
CCCTCCCCAGGACTGGACAAGGTGCGGCCCCTGGACTGCAGCCTTCGTAACTGCAGTGAC
TGTGCTTCCTTCCCCTGGGTGACTCGCTTGCTCCGTGGTAGCCAGCACCTCATTAAGGCA
ACTTCCTCCTGCAGGATGGCCACCATGGTGCCATCGTGGCTGCCGTCCGGGGCCTACTGG
ATTTTCCTCATCTCTCTGCTTCTAGTTGCCTGTCTACTACCCCCAGGTGCTCAGGGGCAG
GAGTTCCAGATGAGAGTGGAGCTGCAGCCCCCAGCAGTGCTTCCTGGAGAGTCTGTCTTG
GTAAACTGCAGTACAGATTGCCTCCATGCTAAACTCATCTCCGTAGAGACGTACCTACTC
TGGGAGCCGGTGGGCAGTGGCCGGGGCTGGGCAGCCTTCCAACTCAACAATGTGACTGGT
GACACCCAGTTCTTCTGCTTTGGCCTCTGCGATGACTTCCAGATAGTAAGATCCTCTAAC
ATCACCATCTACCGGTTCCCAGAGCGCGTGGAACTGGCCCCTCTGCCCCCCTGGCACCCC
TTGGACAAGCCCCTCCTCCTGAGTTGCCTCTTGTCTGGCGGAGCTCCCAGGGCCCACCTC
ACGGTGGCGCTGTTCAAGGGGGAGGAAGAGCTGGGCCGGCAGCCAGCAGCAAAGGGGGAG
CCCACCGAAGTCACGGTCACAGTGTCCGCGAGCAGAGACGACCACGGCGCCAATTTCTCT
TGCCGCACAGAATTGGACCTGCGGTCTCAAGGGCTGGGACTGTTCCAGAACAGTTCTGCC
CCCAGAAAGCTCCAAACCTTCGCCATGCCCGTGACCCCTCCTCGGCTAGTTGTCCCACAG
TTTTCGGAAGTGGAAACGTTGTGGCCCGTGGAGTGCACCCTGGATGGGGTCTTCCCAGCC
TCGGAAGCCCAAGTCCAACTGGCGCTGGGGAACCAGAGTCTGAATCCCGCAGTCGTGAGC
CACGGGGACAGGCTCACGGCCACAGCCACCGCGAAGGCAGAGCAGAAAGGCGCCCACGAG
ATTGTCTGCAACATGACCTTAGGTGGCAAGACCCTGGAGACCCGGGAGAACGTGACGATC
CAAAGTCAGAATCCCCTCGCCATCACCATTAGCCTGGGGGTGTTAGCGATCCTGGGTTTG
GTGATTATCGCTGCGGCCTTAATGTGTGTCTTCCGGGTGCAGAAGCAGAGTGACACTTAT
CAAGTGAACCAAACGAGTCCTAGGCAACCCAAAGAGGCTGCGGCAGCAGAGTGATCCTGA
GCCTCGGACCCTCGGGATACTGCAAGGCAAAGACGACAGGGGCTTGGCGGTATCCCCGAA
TTCCGCACTAATAAAGGCTTTAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTGTGGGTTCATGTGGGATCAGGGTTTAACTGAGGTCTGCCCTCTCAGAGGCTTGCCAGA
GCCTTCCACCCCATTGGGCCCCCCAACTCGGAACCCCGGGGGGGACAGAGTATCCCCTGC
CCCTCCCCAGGACTGGACAAGGTGCGGCCCCTGGACTGCAGCCTTCGTAACTGCAGTGAC
TGTGCTTCCTTCCCCTGGGTGACTCGCTTGCTCCGTGGTAGCCAGCACCTCATTAAGGCA
ACTTCCTCCTGCAGGATGGCCACCATGGTGCCATCGTGGCTGCCGTCCGGGGCCTACTGG
ATTTTCCTCATCTCTCTGCTTCTAGTTGCCTGTCTACTACCCCCAGGTGCTCAGGGGCAG
GAGTTCCAGATGAGAGTGGAGCTGCAGCCCCCAGCAGTGCTTCCTGGAGAGTCTGTCTTG
GTAAACTGCAGTACAGATTGCCTCCATGCTAAACTCATCTCCGTAGAGACGTACCTACTC
TGGGAGCCGGTGGGCAGTGGCCGGGGCTGGGCAGCCTTCCAACTCAACAATGTGACTGGT
GACACCCAGTTCTTCTGCTTTGGCCTCTGCGATGACTTCCAGATAGTAAGATCCTCTAAC
ATCACCATCTACCGGTTCCCAGAGCGCGTGGAACTGGCCCCTCTGCCCCCCTGGCACCCC
TTGGACAAGCCCCTCCTCCTGAGTTGCCTCTTGTCTGGCGGAGCTCCCAGGGCCCACCTC
ACGGTGGCGCTGTTCAAGGGGGAGGAAGAGCTGGGCCGGCAGCCAGCAGCAAAGGGGGAG
CCCACCGAAGTCACGGTCACAGTGTCCGCGAGCAGAGACGACCACGGCGCCAATTTCTCT
TGCCGCACAGAATTGGACCTGCGGTCTCAAGGGCTGGGACTGTTCCAGAACAGTTCTGCC
CCCAGAAAGCTCCAAACCTTCGCCATGCCCGTGACCCCTCCTCGGCTAGTTGTCCCACAG
TTTTCGGAAGTGGAAACGTTGTGGCCCGTGGAGTGCACCCTGGATGGGGTCTTCCCAGCC
TCGGAAGCCCAAGTCCAACTGGCGCTGGGGAACCAGAGTCTGAATCCCGCAGTCGTGAGC
CACGGGGACAGGCTCACGGCCACAGCCACCGCGAAGGCAGAGCAGAAAGGCGCCCACGAG
ATTGTCTGCAACATGACCTTAGGTGGCAAGACCCTGGAGACCCGGGAGAACGTGACGATC
CAAAGTCAGAATCCCCTCGCCATCACCATTAGCCTGGGGGTGTTAGCGATCCTGGGTTTG
GTGATTATCGCTGCGGCCTTAATGTGTGTCTTCCGGGTGCAGAAGCAGAGTGACACTTAT
CAAGTGAACCAAACGAGTCCTAGGCAACCCAAAGAGGCTGCGGCAGCAGAGTGATCCTGA
GCCTCGGACCCTCGGGATACTGCAAGGCAAAGACGACAGGGGCTTGGCGGTATCCCCGAA
TTCCGCACTAATAAAGGCTTTAAA
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gi|51870489|emb|CAG15147.1| |
Protein identifier
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gi|51870489|emb|CAG15147.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-349, gnl|bosTau2|chr7 (9479405-9479765) |
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1-349, gnl|Hg17|chr19 (10311562-10311212) |
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614-919, gnl|bosTau2|chr7 (9525259-9524954) |
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614-919, gnl|canFam2|chr20 (53824993-53824654) |
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614-919, gnl|dasNov1|scaffold_105369 (366-30) |
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614-919, gnl|echTel1|scaffold_307784 (40099-39758) |
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614-919, gnl|hg17|chr19 (10255135-10255470) |
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614-919, gnl|Hg17|chr19 (10255157-10255459) |
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614-919, gnl|loxAfr1|scaffold_80405 (4095-3774) |
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614-919, gnl|mm7|chr9 (20902081-20902426) |
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614-919, gnl|Mm7|chr9 (20902102-20902413) |
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614-919, gnl|monDom2|scaffold_106 (1971556-1971906) |
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614-919, gnl|oryCun1|scaffold_140573 (9157-8816) |
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614-919, gnl|panTro1|chr20 (10640803-10641138) |
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614-919, gnl|rheMac2|chr19 (10096417-10096752) |
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614-919, gnl|rn3|chr8 (20048331-20048665) |
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922-1194, gnl|bosTau2|chr7 (9485007-9485279) |
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922-1194, gnl|Hg17|chr19 (10307030-10306752) |
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922-1194, gnl|Mm7|chr9 (20971667-20971424) |
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1205-1464, gnl|bosTau2|chr7 (9486571-9486834) |
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1205-1464, gnl|Hg17|chr19 (10305735-10305460) |
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1205-1464, gnl|Mm7|chr9 (20970163-20969898) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-349, gnl|bosTau2|chr7 (9479405-9479765) |
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1-349, gnl|Hg17|chr19 (10311562-10311212) |
| |
|
614-919, gnl|bosTau2|chr7 (9525259-9524954) |
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614-919, gnl|canFam2|chr20 (53824993-53824654) |
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614-919, gnl|dasNov1|scaffold_105369 (366-30) |
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614-919, gnl|echTel1|scaffold_307784 (40099-39758) |
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614-919, gnl|hg17|chr19 (10255135-10255470) |
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614-919, gnl|Hg17|chr19 (10255157-10255459) |
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614-919, gnl|loxAfr1|scaffold_80405 (4095-3774) |
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614-919, gnl|mm7|chr9 (20902081-20902426) |
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614-919, gnl|Mm7|chr9 (20902102-20902413) |
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614-919, gnl|monDom2|scaffold_106 (1971556-1971906) |
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614-919, gnl|oryCun1|scaffold_140573 (9157-8816) |
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614-919, gnl|panTro1|chr20 (10640803-10641138) |
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614-919, gnl|rheMac2|chr19 (10096417-10096752) |
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614-919, gnl|rn3|chr8 (20048331-20048665) |
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922-1194, gnl|bosTau2|chr7 (9485007-9485279) |
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922-1194, gnl|Hg17|chr19 (10307030-10306752) |
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922-1194, gnl|Mm7|chr9 (20971667-20971424) |
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1205-1464, gnl|bosTau2|chr7 (9486571-9486834) |
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1205-1464, gnl|Hg17|chr19 (10305735-10305460) |
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1205-1464, gnl|Mm7|chr9 (20970163-20969898) |
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nlu (0.191681) |
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csp (0.161186) |
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eli (0.151814) |
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ese (0.126502) |
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nlu (0.191681) |
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csp (0.161186) |
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eli (0.151814) |
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ese (0.126502) |
