Ss1.1-Spl1-SPL01B060067.5
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AACATTGTGCCTAATCCTAGGATCTCGGACGCTGAACTTGAAGCTGAACTTGAGAAACTG
TCCTTATCAGAGGGAGGTTTGGTCCCAAGCAGTAAATCTCCAAAAAGACAATTGGAACCG
ACTCTCTAAAGCCATTGCAGGACCTCAAGTGCAGGACCTCATGTCAAAGAGAGACCATGC
TTGTGTGTGTGTACATAGTTATTTAAATGAGAAACTTTTGGAATGTGTTGGGAAGAGGAG
GAACGACAAGCACTCTAATGTATCTGGATGCTACTACTTACTACGGACAGATAGAATTTC
TGGAAGCCTGCCCCTGAGGCCTGCTGCCAGCTGGGGTCATGAACCTGCCTTCTCATCTTT
ATAGTGCCACAGTTTCTACGGTTCTGTGTTTGCCCTGTCGTCTCTCATAGCCTGCAGTCC
CTGCTACAGGCTGGGTTAGGTTTGTCTCCCCCACCAGCCTTGTTCCGGCCAGCGAAAGTG
AAAGATTCGCAGCTTTGCCAAATCAAAATCTATCCTCGTCCCCCACCCCCACTGTGCATA
GAGGAGTTTATTCTGTCTGTAGGTCTGTTACACAACGTGTCCCAGCCTCACTCTGTTTCT
GTTGGTAGTGAGGAGAATCAAACAGCTACTGCTCTGTGGAGAAACACTACAGTGTAAAAG
TTTTTTTTCCGGACTTAGCTGTCAAATTCTCTGGGCGTTCAGAAGGAGAGGTCACCCCTG
AGTGGCTCAGAGTCCTGACATTTGGAGAGGGGCCTTGTGGGGCTGGTGGACACTGCCGCC
TCTTCCATCTTATGCAAAAGGAGATCTGCTGATGGACAGAGGGTTATTCTTGGTTCTTTG
AACTTGAGCGAGAGAAGCCGGGTGACTGCAGGGCCCCAGGTATCCCAACCCCATGTGCTT
TCTTAAAGAGGCATCATCTCTGCCTTGCCCCATGATGAATAACTAAACATAATTTAAATA
CATAAATCAAAACCAGCCACATGACACACCTCCCCTTCTTGAACCTGGCAGACAACAACA
GGTTCTTTATTTGAATTTCAGAAGCATTTTACTTTGTAGCCCACCGCTCAGGGCAAGGGA
TCTGAGCCAGGATGTGCAATAGAAGCAGAAGACTGTGGCCCCCTGCCACGCCTGCTGTGA
GCTCCCCAGTCCTGCTCTACACCCATCCCCGTCTCCTGAAGGCCCATCTTCCTTCTTCCT
TTGGCCAGTGGGGGAGGATGGTATGGGGGGCCAGGCAGGAGAGGGTCTCAACACTCTGGC
AGCAGAGAGAAGAAAACATACCAGCCACACTGCCACTCTGCTGCCATAGTCCCAGATGCC
TGCCTGGCCCTTGGCTCTGTCCTTCCTGCTTGATGGAACCTGGAGCAGAGGGGAGGGATT
TGCTCCAGGCCAGGAGCACAAATCACTGTTCAACAAATGTCTCTCCCATTCGACCTTGGG
AAACTGAAATGTTGGGGATGAAGAGAAACAATCACTATTTTTTCTTTTTTATCTGGTAAA
TAATTAAAAGAAAAACCCCAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AACATTGTGCCTAATCCTAGGATCTCGGACGCTGAACTTGAAGCTGAACTTGAGAAACTG
TCCTTATCAGAGGGAGGTTTGGTCCCAAGCAGTAAATCTCCAAAAAGACAATTGGAACCG
ACTCTCTAAAGCCATTGCAGGACCTCAAGTGCAGGACCTCATGTCAAAGAGAGACCATGC
TTGTGTGTGTGTACATAGTTATTTAAATGAGAAACTTTTGGAATGTGTTGGGAAGAGGAG
GAACGACAAGCACTCTAATGTATCTGGATGCTACTACTTACTACGGACAGATAGAATTTC
TGGAAGCCTGCCCCTGAGGCCTGCTGCCAGCTGGGGTCATGAACCTGCCTTCTCATCTTT
ATAGTGCCACAGTTTCTACGGTTCTGTGTTTGCCCTGTCGTCTCTCATAGCCTGCAGTCC
CTGCTACAGGCTGGGTTAGGTTTGTCTCCCCCACCAGCCTTGTTCCGGCCAGCGAAAGTG
AAAGATTCGCAGCTTTGCCAAATCAAAATCTATCCTCGTCCCCCACCCCCACTGTGCATA
GAGGAGTTTATTCTGTCTGTAGGTCTGTTACACAACGTGTCCCAGCCTCACTCTGTTTCT
GTTGGTAGTGAGGAGAATCAAACAGCTACTGCTCTGTGGAGAAACACTACAGTGTAAAAG
TTTTTTTTCCGGACTTAGCTGTCAAATTCTCTGGGCGTTCAGAAGGAGAGGTCACCCCTG
AGTGGCTCAGAGTCCTGACATTTGGAGAGGGGCCTTGTGGGGCTGGTGGACACTGCCGCC
TCTTCCATCTTATGCAAAAGGAGATCTGCTGATGGACAGAGGGTTATTCTTGGTTCTTTG
AACTTGAGCGAGAGAAGCCGGGTGACTGCAGGGCCCCAGGTATCCCAACCCCATGTGCTT
TCTTAAAGAGGCATCATCTCTGCCTTGCCCCATGATGAATAACTAAACATAATTTAAATA
CATAAATCAAAACCAGCCACATGACACACCTCCCCTTCTTGAACCTGGCAGACAACAACA
GGTTCTTTATTTGAATTTCAGAAGCATTTTACTTTGTAGCCCACCGCTCAGGGCAAGGGA
TCTGAGCCAGGATGTGCAATAGAAGCAGAAGACTGTGGCCCCCTGCCACGCCTGCTGTGA
GCTCCCCAGTCCTGCTCTACACCCATCCCCGTCTCCTGAAGGCCCATCTTCCTTCTTCCT
TTGGCCAGTGGGGGAGGATGGTATGGGGGGCCAGGCAGGAGAGGGTCTCAACACTCTGGC
AGCAGAGAGAAGAAAACATACCAGCCACACTGCCACTCTGCTGCCATAGTCCCAGATGCC
TGCCTGGCCCTTGGCTCTGTCCTTCCTGCTTGATGGAACCTGGAGCAGAGGGGAGGGATT
TGCTCCAGGCCAGGAGCACAAATCACTGTTCAACAAATGTCTCTCCCATTCGACCTTGGG
AAACTGAAATGTTGGGGATGAAGAGAAACAATCACTATTTTTTCTTTTTTATCTGGTAAA
TAATTAAAAGAAAAACCCCAAAAA
|
|
75-183, - strand, RNAz p=0.684295 |
|
913-1066, - strand, RNAz p=0.988475 |
|
1146-1262, - strand, RNAz p=0.991679 |
|
1158-1253, - strand, RNAz p=0.982583 |
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1288-1466, - strand, RNAz p=0.949555 |
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1303-1418, + strand, RNAz p=0.893583 |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
75-183, - strand, RNAz p=0.684295 |
|
913-1066, - strand, RNAz p=0.988475 |
|
1146-1262, - strand, RNAz p=0.991679 |
|
1158-1253, - strand, RNAz p=0.982583 |
|
1288-1466, - strand, RNAz p=0.949555 |
|
1303-1418, + strand, RNAz p=0.893583 |
|
1181-1351, + strand, RNAmicro p=0.997246 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
1181-1351, + strand, RNAmicro p=0.997246 |
Human gene identifier and UTR site,
human gene reading direction
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75-659, gnl|bosTau2|chr8 (37041199-37040594) |
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75-659, gnl|Hg17|chr8 (23173994-23174564) |
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75-659, gnl|Mm7|chr14 (64362786-64362273) |
| |
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680-1521, gnl|bosTau2|chr8 (37040490-37039656) |
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680-1521, gnl|canFam2|chr25 (37231513-37230642) |
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680-1521, gnl|dasNov1|scaffold_57602 (3529-2648) |
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680-1521, gnl|echTel1|scaffold_322650 (61218-62043) |
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680-1521, gnl|hg17|chr8 (23174609-23175463) |
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680-1521, gnl|Hg17|chr8 (23174623-23175451) |
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680-1521, gnl|loxAfr1|scaffold_64634 (5353-4501) |
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680-1521, gnl|mm7|chr14 (64362226-64361472) |
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680-1521, gnl|Mm7|chr14 (64362211-64361484) |
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680-1521, gnl|monDom2|scaffold_1 (72164168-72163322) |
|
680-1521, gnl|panTro1|chr7 (24118130-24118989) |
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680-1521, gnl|rheMac2|chr8 (23375361-23376221) |
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680-1521, gnl|rn3|chr15 (50105634-50104807) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
75-659, gnl|bosTau2|chr8 (37041199-37040594) |
|
75-659, gnl|Hg17|chr8 (23173994-23174564) |
|
75-659, gnl|Mm7|chr14 (64362786-64362273) |
| |
|
680-1521, gnl|bosTau2|chr8 (37040490-37039656) |
|
680-1521, gnl|canFam2|chr25 (37231513-37230642) |
|
680-1521, gnl|dasNov1|scaffold_57602 (3529-2648) |
|
680-1521, gnl|echTel1|scaffold_322650 (61218-62043) |
|
680-1521, gnl|hg17|chr8 (23174609-23175463) |
|
680-1521, gnl|Hg17|chr8 (23174623-23175451) |
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680-1521, gnl|loxAfr1|scaffold_64634 (5353-4501) |
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680-1521, gnl|mm7|chr14 (64362226-64361472) |
|
680-1521, gnl|Mm7|chr14 (64362211-64361484) |
|
680-1521, gnl|monDom2|scaffold_1 (72164168-72163322) |
|
680-1521, gnl|panTro1|chr7 (24118130-24118989) |
|
680-1521, gnl|rheMac2|chr8 (23375361-23376221) |
|
680-1521, gnl|rn3|chr15 (50105634-50104807) |
|
cly (0.241284) |
|
ton (0.1755) |
|
lnt (0.142308) |
|
med (0.116252) |
|
cly (0.241284) |
|
ton (0.1755) |
|
lnt (0.142308) |
|
med (0.116252) |
