Ss1.1-Spl1-SPL01B110053.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
TTGCGAGGAGAGGGCGGGGTGTCGTTCCCTTTCGCTGATGCAAGATCCTAGTGCGGTGGT GAGAGAGGTATCGGCAGGAGCAGCTCTGAAGCCGGGGTCTGAGGCTGACCCGTCCGACTT TCCGTCTGTGTTGAGCCCACTCGAGCCGCAGCCATGTCCGGGGACGAGATGATTTTTGAT CCTACTATGAGCAAGAAGAAAAAGAAGAAGAAGAAGCCTTTTATGTTAGATGAGGAAGGG GATGCCCAGACAGAAGAAACTCAGCCCTCAGAAACAAAAGAAGTGGAGCCAGAGCCTACT GAAGACAAAGATGTAGAAGCTGATGAAGAGGACAGTAGGAAAAAAGATGCTTCTGATGAT CTAGATGACTTGAACTTCTTTAATCAGAAGAAAAAGAAGAAAAAAACAAAAAAGATATTT GATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGTTCAAGAA CCAGCTGAACCAGAGGATGACCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAG AATGTCAAGTTCCCAGATGAGGATGAAATACTAGAGAAAGATGAAGCTTTGGAAGATGAA GACAGCAAAAAAGACGATGGTATCTCATTCAGTAACCAGACAGGCCCTGCTTGGGCAGGC TCAGAAAGAGACTACACATATGAAGAGCTACTGAATCGAGTGTTCAACATCATGAGGGAA AAGAATCCAGATATGGTTGCTGGAGAGAAAAGGAAATTTGTTATGAAACCTCCACAGGTT GTCCGAGTGGGAACCAAGAAAACTTCTTTTGTCAACTTTACAGATATCTGTAAACTATTA CATCGTCAGCCCAAACATCTCCTTGCCTTTTTATTGGCTGAATTGGGTACAAGTGGTTCT ATAGATGGTAATAACCAACTCGTAATTAAAGGAAGATTCCAACAGAAACAGATAGAAAAT GTTTTGAGAAGATATATCAAGGAATATGTCACCTGTCATACGTGCCGATCACCGGACACA ATCCTGCAAAAGGACACCCGACTCTATTTCTTACAGTGCGAAACTTGTCATTCTCGATGC TCTGTTGCCAGCATCAAAACTGGCTTCCAGGCTGTCACGGGCAAGCGAGCACAGCTCCGT GCCAAAGCTAACTAATTTGCTAATCACCACTGATTTTGCAAAGTATGTTGTGGAGGTTGG CTGGACAGGTTTACCATCAGAATGGATATATACCATTGTATTAAAAACAAGATAGAAAAG CTGCCAAGTTCTTTGGTGTGTGGCTGGTTGGTCTGAAATCCTTGCAAGATGCCGATGCTC AAAGCTGTTGACCTACTCATTGCCTACTTTAACAACTGTCAGAGAAACATGAGGGGTAAG GCAGTGCTTTTTAAAAATCGGTCATAGACTTCTGTAAAATGCAAGATAAATTAAAGTTAT TATAACAGTGAAAAAAAAAAAAAA |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
TTGCGAGGAGAGGGCGGGGTGTCGTTCCCTTTCGCTGATGCAAGATCCTAGTGCGGTGGT GAGAGAGGTATCGGCAGGAGCAGCTCTGAAGCCGGGGTCTGAGGCTGACCCGTCCGACTT TCCGTCTGTGTTGAGCCCACTCGAGCCGCAGCCATGTCCGGGGACGAGATGATTTTTGAT CCTACTATGAGCAAGAAGAAAAAGAAGAAGAAGAAGCCTTTTATGTTAGATGAGGAAGGG GATGCCCAGACAGAAGAAACTCAGCCCTCAGAAACAAAAGAAGTGGAGCCAGAGCCTACT GAAGACAAAGATGTAGAAGCTGATGAAGAGGACAGTAGGAAAAAAGATGCTTCTGATGAT CTAGATGACTTGAACTTCTTTAATCAGAAGAAAAAGAAGAAAAAAACAAAAAAGATATTT GATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGTTCAAGAA CCAGCTGAACCAGAGGATGACCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAG AATGTCAAGTTCCCAGATGAGGATGAAATACTAGAGAAAGATGAAGCTTTGGAAGATGAA GACAGCAAAAAAGACGATGGTATCTCATTCAGTAACCAGACAGGCCCTGCTTGGGCAGGC TCAGAAAGAGACTACACATATGAAGAGCTACTGAATCGAGTGTTCAACATCATGAGGGAA AAGAATCCAGATATGGTTGCTGGAGAGAAAAGGAAATTTGTTATGAAACCTCCACAGGTT GTCCGAGTGGGAACCAAGAAAACTTCTTTTGTCAACTTTACAGATATCTGTAAACTATTA CATCGTCAGCCCAAACATCTCCTTGCCTTTTTATTGGCTGAATTGGGTACAAGTGGTTCT ATAGATGGTAATAACCAACTCGTAATTAAAGGAAGATTCCAACAGAAACAGATAGAAAAT GTTTTGAGAAGATATATCAAGGAATATGTCACCTGTCATACGTGCCGATCACCGGACACA ATCCTGCAAAAGGACACCCGACTCTATTTCTTACAGTGCGAAACTTGTCATTCTCGATGC TCTGTTGCCAGCATCAAAACTGGCTTCCAGGCTGTCACGGGCAAGCGAGCACAGCTCCGT GCCAAAGCTAACTAATTTGCTAATCACCACTGATTTTGCAAAGTATGTTGTGGAGGTTGG CTGGACAGGTTTACCATCAGAATGGATATATACCATTGTATTAAAAACAAGATAGAAAAG CTGCCAAGTTCTTTGGTGTGTGGCTGGTTGGTCTGAAATCCTTGCAAGATGCCGATGCTC AAAGCTGTTGACCTACTCATTGCCTACTTTAACAACTGTCAGAGAAACATGAGGGGTAAG GCAGTGCTTTTTAAAAATCGGTCATAGACTTCTGTAAAATGCAAGATAAATTAAAGTTAT TATAACAGTGAAAAAAAAAAAAAA |
Coded protein: 1 entry(ies) | More info |
Predicted RNA structure(s): 1 entry(ies) | More info |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
719-836, + strand, RNAz p=0.643034 |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
719-836, + strand, RNAz p=0.643034 |
Aligned organism(s): 260 entry(ies) | More info |
Aligned organism(s): 260 entry(ies) | Help | Less info |
167-346, gnl|bosTau2|chr13 (47890760-47890939) | |
167-346, gnl|canFam2|chr24 (26255555-26255710) | |
167-346, gnl|danRer3|chr6 (31894212-31894081) | |
167-346, gnl|dasNov1|scaffold_223225 (402-273) | |
167-346, gnl|echTel1|scaffold_319012 (149307-149462) | |
167-346, gnl|fr1|chrUn (151785597-151785735) | |
167-346, gnl|galGal2|chr20 (1561466-1561332) | |
167-346, gnl|hg17|chr20 (32156834-32156989) | |
167-346, gnl|Hg17|chr20 (32157014-32156835) | |
167-346, gnl|loxAfr1|scaffold_11614 (72526-72371) | |
167-346, gnl|mm7|chr2 (154629040-154629195) | |
167-346, gnl|Mm7|chr2 (154629220-154629041) | |
167-346, gnl|monDom2|scaffold_6 (12952783-12952628) | |
167-346, gnl|oryCun1|scaffold_206780 (115364-115209) | |
167-346, gnl|panTro1|chr21 (34125424-34125579) | |
167-346, gnl|rheMac2|chr10 (30483290-30483135) | |
167-346, gnl|rn3|chr3 (145267043-145267198) | |
167-346, gnl|xenTro1|scaffold_35 (1546480-1546322) | |
449-586, gnl|bosTau2|chr13 (47895476-47895613) | |
449-586, gnl|canFam2|chr24 (26249152-26249272) | |
449-586, gnl|canFam2|chrX (43769559-43769691) | |
449-586, gnl|canFam2|chrX (43769693-43769591) | |
449-586, gnl|canFam2|chrX (43769693-43769560) | |
449-586, gnl|canFam2|chrX (43769693-43769592) | |
449-586, gnl|canFam2|chrX (43769559-43769686) | |
449-586, gnl|dasNov1|scaffold_223225 (492-618) | |
449-586, gnl|dasNov1|scaffold_223225 (620-524) | |
449-586, gnl|dasNov1|scaffold_223225 (620-493) | |
449-586, gnl|dasNov1|scaffold_223225 (620-525) | |
449-586, gnl|dasNov1|scaffold_223225 (492-613) | |
449-586, gnl|dasNov1|scaffold_75486 (405-286) | |
449-586, gnl|echTel1|scaffold_184583 (3231-3363) | |
449-586, gnl|echTel1|scaffold_184583 (3365-3263) | |
449-586, gnl|echTel1|scaffold_184583 (3231-3355) | |
449-586, gnl|echTel1|scaffold_211645 (8594-8715) | |
449-586, gnl|echTel1|scaffold_211645 (8594-8683) | |
449-586, gnl|echTel1|scaffold_319012 (146373-146494) | |
449-586, gnl|fr1|chrUn (151785318-151785192) | |
449-586, gnl|fr1|chrUn (151785150-151785287) | |
449-586, gnl|fr1|chrUn (151785163-151785402) | |
449-586, gnl|fr1|chrUn (151785150-151785285) | |
449-586, gnl|fr1|chrUn (151785170-151785285) | |
449-586, gnl|fr1|chrUn (151785318-151785193) | |
449-586, gnl|galGal2|chr20 (1563684-1563816) | |
449-586, gnl|galGal2|chr20 (1563818-1563716) | |
449-586, gnl|galGal2|chr20 (1563818-1563685) | |
449-586, gnl|galGal2|chr20 (1563818-1563717) | |
449-586, gnl|galGal2|chr20 (1563822-1563717) | |
449-586, gnl|galGal2|chr20 (1563684-1563809) | |
449-586, gnl|hg17|chr10 (94419052-94419150) | |
449-586, gnl|hg17|chr11 (82224476-82224602) | |
449-586, gnl|hg17|chr14 (63271405-63271534) | |
449-586, gnl|hg17|chr2 (57187703-57187836) | |
449-586, gnl|hg17|chr20 (32149946-32150067) | |
449-586, gnl|Hg17|chr20 (32150102-32149965) | |
449-586, gnl|hg17|chr3 (186446506-186446607) | |
449-586, gnl|loxAfr1|scaffold_11614 (77963-78095) | |
449-586, gnl|loxAfr1|scaffold_11614 (78097-77995) | |
449-586, gnl|loxAfr1|scaffold_11614 (78097-77964) | |
449-586, gnl|loxAfr1|scaffold_11614 (78097-77996) | |
449-586, gnl|loxAfr1|scaffold_11614 (78117-77996) | |
449-586, gnl|loxAfr1|scaffold_11614 (77963-78088) | |
449-586, gnl|mm7|chr2 (154625150-154625271) | |
449-586, gnl|Mm7|chr2 (154625306-154625169) | |
449-586, gnl|mm7|chr8 (50969504-50969372) | |
449-586, gnl|mm7|chr8 (50969370-50969472) | |
449-586, gnl|mm7|chr8 (50969370-50969503) | |
449-586, gnl|mm7|chr8 (50969370-50969471) | |
449-586, gnl|mm7|chr8 (50969504-50969377) | |
449-586, gnl|monDom2|scaffold_13 (53009321-53009420) | |
449-586, gnl|monDom2|scaffold_6 (102404951-102404819) | |
449-586, gnl|monDom2|scaffold_6 (102404817-102404950) | |
449-586, gnl|monDom2|scaffold_6 (102404817-102404918) | |
449-586, gnl|monDom2|scaffold_6 (12956228-12956121) | |
449-586, gnl|monDom2|scaffold_6 (101989428-101989304) | |
449-586, gnl|oryCun1|scaffold_158452 (4849-4724) | |
449-586, gnl|oryCun1|scaffold_158452 (4722-4848) | |
449-586, gnl|oryCun1|scaffold_158452 (4849-4755) | |
449-586, gnl|oryCun1|scaffold_206370 (6499-6397) | |
449-586, gnl|oryCun1|scaffold_206370 (6499-6398) | |
449-586, gnl|oryCun1|scaffold_206370 (6519-6398) | |
449-586, gnl|panTro1|chr12 (59317951-59318084) | |
449-586, gnl|panTro1|chr15 (62836112-62836244) | |
449-586, gnl|panTro1|chr21 (34118508-34118629) | |
449-586, gnl|panTro1|chr2_random (25696762-25696660) | |
449-586, gnl|panTro1|chr8 (96177566-96177664) | |
449-586, gnl|panTro1|chr9 (83605413-83605539) | |
449-586, gnl|rheMac2|chr10 (30490354-30490233) | |
449-586, gnl|rheMac2|chr13 (57309802-57309936) | |
449-586, gnl|rheMac2|chr14 (81098590-81098716) | |
449-586, gnl|rheMac2|chr2 (101397704-101397611) | |
449-586, gnl|rheMac2|chr7 (126748981-126749113) | |
449-586, gnl|rheMac2|chr9 (92139727-92139825) | |
449-586, gnl|rn3|chr3 (145263542-145263663) | |
449-586, gnl|rn3|chr6 (109055201-109055333) | |
449-586, gnl|rn3|chr6 (109055335-109055233) | |
449-586, gnl|rn3|chr6 (109055335-109055202) | |
449-586, gnl|rn3|chr6 (109055335-109055234) | |
449-586, gnl|rn3|chr6 (109055201-109055328) | |
449-586, gnl|tetNig1|chr9 (1048114-1047988) | |
449-586, gnl|tetNig1|chr9 (1047941-1048083) | |
449-586, gnl|tetNig1|chr9 (1047955-1048186) | |
449-586, gnl|tetNig1|chr9 (1047941-1048081) | |
449-586, gnl|tetNig1|chr9 (1047982-1048081) | |
449-586, gnl|tetNig1|chr9 (1048114-1047989) | |
449-586, gnl|xenTro1|scaffold_35 (1547889-1548021) | |
449-586, gnl|xenTro1|scaffold_35 (1546708-1546634) | |
449-586, gnl|xenTro1|scaffold_35 (1548023-1547890) | |
449-586, gnl|xenTro1|scaffold_35 (1548023-1547922) | |
449-586, gnl|xenTro1|scaffold_35 (1548041-1547922) | |
449-586, gnl|xenTro1|scaffold_35 (1547889-1548014) | |
686-836, gnl|bosTau2|chr13 (47896993-47897143) | |
686-836, gnl|canFam2|chrX (43769799-43769913) | |
686-836, gnl|canFam2|chrX (43769793-43769944) | |
686-836, gnl|canFam2|chrX (43769945-43769795) | |
686-836, gnl|canFam2|chrX (43769942-43769790) | |
686-836, gnl|canFam2|chrX (43769943-43769795) | |
686-836, gnl|canFam2|chrX (43769793-43769944) | |
686-836, gnl|danRer3|chr13 (11585652-11585767) | |
686-836, gnl|danRer3|chr13 (11585646-11585826) | |
686-836, gnl|danRer3|chr13 (11585646-11585797) | |
686-836, gnl|danRer3|chr6 (31903190-31903040) | |
686-836, gnl|danRer3|chr6 (31903187-31903040) | |
686-836, gnl|danRer3|chr6 (31903188-31903040) | |
686-836, gnl|dasNov1|scaffold_223225 (722-840) | |
686-836, gnl|dasNov1|scaffold_223225 (717-862) | |
686-836, gnl|dasNov1|scaffold_223225 (864-719) | |
686-836, gnl|dasNov1|scaffold_223225 (864-717) | |
686-836, gnl|dasNov1|scaffold_223225 (862-719) | |
686-836, gnl|dasNov1|scaffold_223225 (717-862) | |
686-836, gnl|echTel1|scaffold_184583 (3471-3569) | |
686-836, gnl|echTel1|scaffold_184583 (3465-3616) | |
686-836, gnl|echTel1|scaffold_184583 (3617-3467) | |
686-836, gnl|echTel1|scaffold_184583 (3465-3616) | |
686-836, gnl|echTel1|scaffold_211645 (8350-8494) | |
686-836, gnl|echTel1|scaffold_211645 (8349-8492) | |
686-836, gnl|fr1|chrUn (151784610-151784506) | |
686-836, gnl|fr1|chrUn (151784616-151784382) | |
686-836, gnl|fr1|chrUn (151784464-151784614) | |
686-836, gnl|fr1|chrUn (151784467-151784614) | |
686-836, gnl|fr1|chrUn (151784466-151784614) | |
686-836, gnl|fr1|chrUn (151784616-151784465) | |
686-836, gnl|galGal2|chr20 (1564663-1564765) | |
686-836, gnl|galGal2|chr20 (1564663-1564806) | |
686-836, gnl|galGal2|chr20 (1564807-1564657) | |
686-836, gnl|galGal2|chr20 (1564803-1564653) | |
686-836, gnl|galGal2|chr20 (1564805-1564657) | |
686-836, gnl|galGal2|chr20 (1564663-1564805) | |
686-836, gnl|hg17|chr1 (114723503-114723649) | |
686-836, gnl|hg17|chr10 (94418802-94418950) | |
686-836, gnl|hg17|chr11 (82225012-82225163) | |
686-836, gnl|hg17|chr14 (63271638-63271755) | |
686-836, gnl|hg17|chr2 (57187455-57187605) | |
686-836, gnl|Hg17|chr20 (32148274-32148124) | |
686-836, gnl|hg17|chr3 (186446254-186446404) | |
686-836, gnl|loxAfr1|scaffold_11614 (79659-79776) | |
686-836, gnl|loxAfr1|scaffold_11614 (79653-79804) | |
686-836, gnl|loxAfr1|scaffold_11614 (79805-79655) | |
686-836, gnl|loxAfr1|scaffold_11614 (79802-79653) | |
686-836, gnl|loxAfr1|scaffold_11614 (79803-79655) | |
686-836, gnl|loxAfr1|scaffold_11614 (79653-79804) | |
686-836, gnl|Mm7|chr2 (154618679-154618529) | |
686-836, gnl|mm7|chr8 (50969270-50969156) | |
686-836, gnl|mm7|chr8 (50969276-50969125) | |
686-836, gnl|mm7|chr8 (50969124-50969274) | |
686-836, gnl|mm7|chr8 (50969127-50969279) | |
686-836, gnl|mm7|chr8 (50969126-50969274) | |
686-836, gnl|mm7|chr8 (50969276-50969125) | |
686-836, gnl|monDom2|scaffold_13 (53009070-53009220) | |
686-836, gnl|monDom2|scaffold_6 (102404711-102404607) | |
686-836, gnl|monDom2|scaffold_6 (101989194-101989043) | |
686-836, gnl|monDom2|scaffold_6 (102404568-102404720) | |
686-836, gnl|monDom2|scaffold_6 (102404567-102404715) | |
686-836, gnl|monDom2|scaffold_6 (101989194-101989043) | |
686-836, gnl|oryCun1|scaffold_158452 (4637-4537) | |
686-836, gnl|oryCun1|scaffold_158452 (4637-4496) | |
686-836, gnl|oryCun1|scaffold_158452 (4498-4637) | |
686-836, gnl|oryCun1|scaffold_158452 (4637-4496) | |
686-836, gnl|oryCun1|scaffold_206370 (8017-7867) | |
686-836, gnl|oryCun1|scaffold_206370 (8015-7867) | |
686-836, gnl|panTro1|chr12 (59317703-59317853) | |
686-836, gnl|panTro1|chr15 (62836348-62836466) | |
686-836, gnl|panTro1|chr1_random (7393091-7393237) | |
686-836, gnl|panTro1|chr2_random (25697014-25696864) | |
686-836, gnl|panTro1|chr8 (96177316-96177464) | |
686-836, gnl|panTro1|chr9 (83605946-83606097) | |
686-836, gnl|rheMac2|chr1 (117459098-117459244) | |
686-836, gnl|rheMac2|chr13 (57309565-57309715) | |
686-836, gnl|rheMac2|chr14 (81099114-81099265) | |
686-836, gnl|rheMac2|chr2 (101397956-101397806) | |
686-836, gnl|rheMac2|chr7 (126749217-126749315) | |
686-836, gnl|rheMac2|chr9 (92139482-92139625) | |
686-836, gnl|rn3|chr6 (109055439-109055553) | |
686-836, gnl|rn3|chr6 (109055433-109055584) | |
686-836, gnl|rn3|chr6 (109055585-109055435) | |
686-836, gnl|rn3|chr6 (109055582-109055430) | |
686-836, gnl|rn3|chr6 (109055583-109055435) | |
686-836, gnl|rn3|chr6 (109055433-109055584) | |
686-836, gnl|tetNig1|chr9 (1047719-1047605) | |
686-836, gnl|tetNig1|chr9 (1047725-1047493) | |
686-836, gnl|tetNig1|chr9 (1047573-1047723) | |
686-836, gnl|tetNig1|chr9 (1047576-1047723) | |
686-836, gnl|tetNig1|chr9 (1047575-1047723) | |
686-836, gnl|tetNig1|chr9 (1047725-1047574) | |
686-836, gnl|xenTro1|scaffold_35 (1549406-1549521) | |
686-836, gnl|xenTro1|scaffold_35 (1549400-1549551) | |
686-836, gnl|xenTro1|scaffold_35 (1549552-1549402) | |
686-836, gnl|xenTro1|scaffold_35 (1549549-1549400) | |
686-836, gnl|xenTro1|scaffold_35 (1549550-1549402) | |
686-836, gnl|xenTro1|scaffold_35 (1549400-1549551) | |
980-1451, gnl|bosTau2|chr13 (47904115-47904585) | |
980-1451, gnl|canFam2|chr24 (26241747-26242075) | |
980-1451, gnl|canFam2|chrX (43770567-43770263) | |
980-1451, gnl|canFam2|chrX (43770566-43770263) | |
980-1451, gnl|canFam2|chrX (43770242-43770577) | |
980-1451, gnl|dasNov1|scaffold_223225 (1457-1173) | |
980-1451, gnl|dasNov1|scaffold_223225 (1471-1173) | |
980-1451, gnl|dasNov1|scaffold_75486 (6016-5690) | |
980-1451, gnl|dasNov1|scaffold_75486 (5669-5980) | |
980-1451, gnl|echTel1|scaffold_211645 (7734-8029) | |
980-1451, gnl|echTel1|scaffold_211645 (7734-8029) | |
980-1451, gnl|echTel1|scaffold_319012 (140514-140837) | |
980-1451, gnl|echTel1|scaffold_319012 (140858-140545) | |
980-1451, gnl|galGal2|chr20 (1568109-1567830) | |
980-1451, gnl|galGal2|chr20 (1568127-1567830) | |
980-1451, gnl|galGal2|chr20 (1568164-1567830) | |
980-1451, gnl|galGal2|chr20 (1567809-1568126) | |
980-1451, gnl|hg17|chr10 (94418180-94418482) | |
980-1451, gnl|hg17|chr11 (27618745-27619068) | |
980-1451, gnl|hg17|chr2 (57186824-57187135) | |
980-1451, gnl|hg17|chr20 (32140873-32141197) | |
980-1451, gnl|Hg17|chr20 (32141372-32140907) | |
980-1451, gnl|mm7|chr2 (154613259-154613583) | |
980-1451, gnl|Mm7|chr2 (154613758-154613293) | |
980-1451, gnl|mm7|chr8 (50968535-50968806) | |
980-1451, gnl|mm7|chr8 (50968512-50968806) | |
980-1451, gnl|mm7|chr8 (50968824-50968508) | |
980-1451, gnl|monDom2|scaffold_6 (102403946-102404247) | |
980-1451, gnl|monDom2|scaffold_6 (102403946-102404247) | |
980-1451, gnl|monDom2|scaffold_6 (12963387-12963049) | |
980-1451, gnl|monDom2|scaffold_6 (12963028-12963350) | |
980-1451, gnl|oryCun1|scaffold_158452 (3009-3301) | |
980-1451, gnl|oryCun1|scaffold_206370 (16413-16120) | |
980-1451, gnl|oryCun1|scaffold_206370 (16448-16120) | |
980-1451, gnl|oryCun1|scaffold_206370 (16102-16412) | |
980-1451, gnl|panTro1|chr12 (59317075-59317386) | |
980-1451, gnl|panTro1|chr21 (34109418-34109740) | |
980-1451, gnl|panTro1|chr8 (96176693-96176995) | |
980-1451, gnl|panTro1|chr9 (27917335-27917658) | |
980-1451, gnl|rheMac2|chr10 (30500190-30499861) | |
980-1451, gnl|rheMac2|chr13 (57308940-57309248) | |
980-1451, gnl|rheMac2|chr14 (44167034-44166696) | |
980-1451, gnl|rheMac2|chr9 (92138861-92139163) | |
980-1451, gnl|rn3|chr3 (145252049-145252369) | |
980-1451, gnl|rn3|chr6 (109056149-109055878) | |
980-1451, gnl|rn3|chr6 (109056163-109055878) | |
980-1451, gnl|rn3|chr6 (109055860-109056161) | |
980-1451, gnl|xenTro1|scaffold_35 (1552228-1551874) | |
980-1451, gnl|xenTro1|scaffold_35 (1552196-1551874) | |
980-1451, gnl|xenTro1|scaffold_35 (1552254-1551874) |
Aligned organism(s): 260 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
167-346, gnl|bosTau2|chr13 (47890760-47890939) | |
167-346, gnl|canFam2|chr24 (26255555-26255710) | |
167-346, gnl|danRer3|chr6 (31894212-31894081) | |
167-346, gnl|dasNov1|scaffold_223225 (402-273) | |
167-346, gnl|echTel1|scaffold_319012 (149307-149462) | |
167-346, gnl|fr1|chrUn (151785597-151785735) | |
167-346, gnl|galGal2|chr20 (1561466-1561332) | |
167-346, gnl|hg17|chr20 (32156834-32156989) | |
167-346, gnl|Hg17|chr20 (32157014-32156835) | |
167-346, gnl|loxAfr1|scaffold_11614 (72526-72371) | |
167-346, gnl|mm7|chr2 (154629040-154629195) | |
167-346, gnl|Mm7|chr2 (154629220-154629041) | |
167-346, gnl|monDom2|scaffold_6 (12952783-12952628) | |
167-346, gnl|oryCun1|scaffold_206780 (115364-115209) | |
167-346, gnl|panTro1|chr21 (34125424-34125579) | |
167-346, gnl|rheMac2|chr10 (30483290-30483135) | |
167-346, gnl|rn3|chr3 (145267043-145267198) | |
167-346, gnl|xenTro1|scaffold_35 (1546480-1546322) | |
449-586, gnl|bosTau2|chr13 (47895476-47895613) | |
449-586, gnl|canFam2|chr24 (26249152-26249272) | |
449-586, gnl|canFam2|chrX (43769559-43769691) | |
449-586, gnl|canFam2|chrX (43769693-43769591) | |
449-586, gnl|canFam2|chrX (43769693-43769560) | |
449-586, gnl|canFam2|chrX (43769693-43769592) | |
449-586, gnl|canFam2|chrX (43769559-43769686) | |
449-586, gnl|dasNov1|scaffold_223225 (492-618) | |
449-586, gnl|dasNov1|scaffold_223225 (620-524) | |
449-586, gnl|dasNov1|scaffold_223225 (620-493) | |
449-586, gnl|dasNov1|scaffold_223225 (620-525) | |
449-586, gnl|dasNov1|scaffold_223225 (492-613) | |
449-586, gnl|dasNov1|scaffold_75486 (405-286) | |
449-586, gnl|echTel1|scaffold_184583 (3231-3363) | |
449-586, gnl|echTel1|scaffold_184583 (3365-3263) | |
449-586, gnl|echTel1|scaffold_184583 (3231-3355) | |
449-586, gnl|echTel1|scaffold_211645 (8594-8715) | |
449-586, gnl|echTel1|scaffold_211645 (8594-8683) | |
449-586, gnl|echTel1|scaffold_319012 (146373-146494) | |
449-586, gnl|fr1|chrUn (151785318-151785192) | |
449-586, gnl|fr1|chrUn (151785150-151785287) | |
449-586, gnl|fr1|chrUn (151785163-151785402) | |
449-586, gnl|fr1|chrUn (151785150-151785285) | |
449-586, gnl|fr1|chrUn (151785170-151785285) | |
449-586, gnl|fr1|chrUn (151785318-151785193) | |
449-586, gnl|galGal2|chr20 (1563684-1563816) | |
449-586, gnl|galGal2|chr20 (1563818-1563716) | |
449-586, gnl|galGal2|chr20 (1563818-1563685) | |
449-586, gnl|galGal2|chr20 (1563818-1563717) | |
449-586, gnl|galGal2|chr20 (1563822-1563717) | |
449-586, gnl|galGal2|chr20 (1563684-1563809) | |
449-586, gnl|hg17|chr10 (94419052-94419150) | |
449-586, gnl|hg17|chr11 (82224476-82224602) | |
449-586, gnl|hg17|chr14 (63271405-63271534) | |
449-586, gnl|hg17|chr2 (57187703-57187836) | |
449-586, gnl|hg17|chr20 (32149946-32150067) | |
449-586, gnl|Hg17|chr20 (32150102-32149965) | |
449-586, gnl|hg17|chr3 (186446506-186446607) | |
449-586, gnl|loxAfr1|scaffold_11614 (77963-78095) | |
449-586, gnl|loxAfr1|scaffold_11614 (78097-77995) | |
449-586, gnl|loxAfr1|scaffold_11614 (78097-77964) | |
449-586, gnl|loxAfr1|scaffold_11614 (78097-77996) | |
449-586, gnl|loxAfr1|scaffold_11614 (78117-77996) | |
449-586, gnl|loxAfr1|scaffold_11614 (77963-78088) | |
449-586, gnl|mm7|chr2 (154625150-154625271) | |
449-586, gnl|Mm7|chr2 (154625306-154625169) | |
449-586, gnl|mm7|chr8 (50969504-50969372) | |
449-586, gnl|mm7|chr8 (50969370-50969472) | |
449-586, gnl|mm7|chr8 (50969370-50969503) | |
449-586, gnl|mm7|chr8 (50969370-50969471) | |
449-586, gnl|mm7|chr8 (50969504-50969377) | |
449-586, gnl|monDom2|scaffold_13 (53009321-53009420) | |
449-586, gnl|monDom2|scaffold_6 (102404951-102404819) | |
449-586, gnl|monDom2|scaffold_6 (102404817-102404950) | |
449-586, gnl|monDom2|scaffold_6 (102404817-102404918) | |
449-586, gnl|monDom2|scaffold_6 (12956228-12956121) | |
449-586, gnl|monDom2|scaffold_6 (101989428-101989304) | |
449-586, gnl|oryCun1|scaffold_158452 (4849-4724) | |
449-586, gnl|oryCun1|scaffold_158452 (4722-4848) | |
449-586, gnl|oryCun1|scaffold_158452 (4849-4755) | |
449-586, gnl|oryCun1|scaffold_206370 (6499-6397) | |
449-586, gnl|oryCun1|scaffold_206370 (6499-6398) | |
449-586, gnl|oryCun1|scaffold_206370 (6519-6398) | |
449-586, gnl|panTro1|chr12 (59317951-59318084) | |
449-586, gnl|panTro1|chr15 (62836112-62836244) | |
449-586, gnl|panTro1|chr21 (34118508-34118629) | |
449-586, gnl|panTro1|chr2_random (25696762-25696660) | |
449-586, gnl|panTro1|chr8 (96177566-96177664) | |
449-586, gnl|panTro1|chr9 (83605413-83605539) | |
449-586, gnl|rheMac2|chr10 (30490354-30490233) | |
449-586, gnl|rheMac2|chr13 (57309802-57309936) | |
449-586, gnl|rheMac2|chr14 (81098590-81098716) | |
449-586, gnl|rheMac2|chr2 (101397704-101397611) | |
449-586, gnl|rheMac2|chr7 (126748981-126749113) | |
449-586, gnl|rheMac2|chr9 (92139727-92139825) | |
449-586, gnl|rn3|chr3 (145263542-145263663) | |
449-586, gnl|rn3|chr6 (109055201-109055333) | |
449-586, gnl|rn3|chr6 (109055335-109055233) | |
449-586, gnl|rn3|chr6 (109055335-109055202) | |
449-586, gnl|rn3|chr6 (109055335-109055234) | |
449-586, gnl|rn3|chr6 (109055201-109055328) | |
449-586, gnl|tetNig1|chr9 (1048114-1047988) | |
449-586, gnl|tetNig1|chr9 (1047941-1048083) | |
449-586, gnl|tetNig1|chr9 (1047955-1048186) | |
449-586, gnl|tetNig1|chr9 (1047941-1048081) | |
449-586, gnl|tetNig1|chr9 (1047982-1048081) | |
449-586, gnl|tetNig1|chr9 (1048114-1047989) | |
449-586, gnl|xenTro1|scaffold_35 (1547889-1548021) | |
449-586, gnl|xenTro1|scaffold_35 (1546708-1546634) | |
449-586, gnl|xenTro1|scaffold_35 (1548023-1547890) | |
449-586, gnl|xenTro1|scaffold_35 (1548023-1547922) | |
449-586, gnl|xenTro1|scaffold_35 (1548041-1547922) | |
449-586, gnl|xenTro1|scaffold_35 (1547889-1548014) | |
686-836, gnl|bosTau2|chr13 (47896993-47897143) | |
686-836, gnl|canFam2|chrX (43769799-43769913) | |
686-836, gnl|canFam2|chrX (43769793-43769944) | |
686-836, gnl|canFam2|chrX (43769945-43769795) | |
686-836, gnl|canFam2|chrX (43769942-43769790) | |
686-836, gnl|canFam2|chrX (43769943-43769795) | |
686-836, gnl|canFam2|chrX (43769793-43769944) | |
686-836, gnl|danRer3|chr13 (11585652-11585767) | |
686-836, gnl|danRer3|chr13 (11585646-11585826) | |
686-836, gnl|danRer3|chr13 (11585646-11585797) | |
686-836, gnl|danRer3|chr6 (31903190-31903040) | |
686-836, gnl|danRer3|chr6 (31903187-31903040) | |
686-836, gnl|danRer3|chr6 (31903188-31903040) | |
686-836, gnl|dasNov1|scaffold_223225 (722-840) | |
686-836, gnl|dasNov1|scaffold_223225 (717-862) | |
686-836, gnl|dasNov1|scaffold_223225 (864-719) | |
686-836, gnl|dasNov1|scaffold_223225 (864-717) | |
686-836, gnl|dasNov1|scaffold_223225 (862-719) | |
686-836, gnl|dasNov1|scaffold_223225 (717-862) | |
686-836, gnl|echTel1|scaffold_184583 (3471-3569) | |
686-836, gnl|echTel1|scaffold_184583 (3465-3616) | |
686-836, gnl|echTel1|scaffold_184583 (3617-3467) | |
686-836, gnl|echTel1|scaffold_184583 (3465-3616) | |
686-836, gnl|echTel1|scaffold_211645 (8350-8494) | |
686-836, gnl|echTel1|scaffold_211645 (8349-8492) | |
686-836, gnl|fr1|chrUn (151784610-151784506) | |
686-836, gnl|fr1|chrUn (151784616-151784382) | |
686-836, gnl|fr1|chrUn (151784464-151784614) | |
686-836, gnl|fr1|chrUn (151784467-151784614) | |
686-836, gnl|fr1|chrUn (151784466-151784614) | |
686-836, gnl|fr1|chrUn (151784616-151784465) | |
686-836, gnl|galGal2|chr20 (1564663-1564765) | |
686-836, gnl|galGal2|chr20 (1564663-1564806) | |
686-836, gnl|galGal2|chr20 (1564807-1564657) | |
686-836, gnl|galGal2|chr20 (1564803-1564653) | |
686-836, gnl|galGal2|chr20 (1564805-1564657) | |
686-836, gnl|galGal2|chr20 (1564663-1564805) | |
686-836, gnl|hg17|chr1 (114723503-114723649) | |
686-836, gnl|hg17|chr10 (94418802-94418950) | |
686-836, gnl|hg17|chr11 (82225012-82225163) | |
686-836, gnl|hg17|chr14 (63271638-63271755) | |
686-836, gnl|hg17|chr2 (57187455-57187605) | |
686-836, gnl|Hg17|chr20 (32148274-32148124) | |
686-836, gnl|hg17|chr3 (186446254-186446404) | |
686-836, gnl|loxAfr1|scaffold_11614 (79659-79776) | |
686-836, gnl|loxAfr1|scaffold_11614 (79653-79804) | |
686-836, gnl|loxAfr1|scaffold_11614 (79805-79655) | |
686-836, gnl|loxAfr1|scaffold_11614 (79802-79653) | |
686-836, gnl|loxAfr1|scaffold_11614 (79803-79655) | |
686-836, gnl|loxAfr1|scaffold_11614 (79653-79804) | |
686-836, gnl|Mm7|chr2 (154618679-154618529) | |
686-836, gnl|mm7|chr8 (50969270-50969156) | |
686-836, gnl|mm7|chr8 (50969276-50969125) | |
686-836, gnl|mm7|chr8 (50969124-50969274) | |
686-836, gnl|mm7|chr8 (50969127-50969279) | |
686-836, gnl|mm7|chr8 (50969126-50969274) | |
686-836, gnl|mm7|chr8 (50969276-50969125) | |
686-836, gnl|monDom2|scaffold_13 (53009070-53009220) | |
686-836, gnl|monDom2|scaffold_6 (102404711-102404607) | |
686-836, gnl|monDom2|scaffold_6 (101989194-101989043) | |
686-836, gnl|monDom2|scaffold_6 (102404568-102404720) | |
686-836, gnl|monDom2|scaffold_6 (102404567-102404715) | |
686-836, gnl|monDom2|scaffold_6 (101989194-101989043) | |
686-836, gnl|oryCun1|scaffold_158452 (4637-4537) | |
686-836, gnl|oryCun1|scaffold_158452 (4637-4496) | |
686-836, gnl|oryCun1|scaffold_158452 (4498-4637) | |
686-836, gnl|oryCun1|scaffold_158452 (4637-4496) | |
686-836, gnl|oryCun1|scaffold_206370 (8017-7867) | |
686-836, gnl|oryCun1|scaffold_206370 (8015-7867) | |
686-836, gnl|panTro1|chr12 (59317703-59317853) | |
686-836, gnl|panTro1|chr15 (62836348-62836466) | |
686-836, gnl|panTro1|chr1_random (7393091-7393237) | |
686-836, gnl|panTro1|chr2_random (25697014-25696864) | |
686-836, gnl|panTro1|chr8 (96177316-96177464) | |
686-836, gnl|panTro1|chr9 (83605946-83606097) | |
686-836, gnl|rheMac2|chr1 (117459098-117459244) | |
686-836, gnl|rheMac2|chr13 (57309565-57309715) | |
686-836, gnl|rheMac2|chr14 (81099114-81099265) | |
686-836, gnl|rheMac2|chr2 (101397956-101397806) | |
686-836, gnl|rheMac2|chr7 (126749217-126749315) | |
686-836, gnl|rheMac2|chr9 (92139482-92139625) | |
686-836, gnl|rn3|chr6 (109055439-109055553) | |
686-836, gnl|rn3|chr6 (109055433-109055584) | |
686-836, gnl|rn3|chr6 (109055585-109055435) | |
686-836, gnl|rn3|chr6 (109055582-109055430) | |
686-836, gnl|rn3|chr6 (109055583-109055435) | |
686-836, gnl|rn3|chr6 (109055433-109055584) | |
686-836, gnl|tetNig1|chr9 (1047719-1047605) | |
686-836, gnl|tetNig1|chr9 (1047725-1047493) | |
686-836, gnl|tetNig1|chr9 (1047573-1047723) | |
686-836, gnl|tetNig1|chr9 (1047576-1047723) | |
686-836, gnl|tetNig1|chr9 (1047575-1047723) | |
686-836, gnl|tetNig1|chr9 (1047725-1047574) | |
686-836, gnl|xenTro1|scaffold_35 (1549406-1549521) | |
686-836, gnl|xenTro1|scaffold_35 (1549400-1549551) | |
686-836, gnl|xenTro1|scaffold_35 (1549552-1549402) | |
686-836, gnl|xenTro1|scaffold_35 (1549549-1549400) | |
686-836, gnl|xenTro1|scaffold_35 (1549550-1549402) | |
686-836, gnl|xenTro1|scaffold_35 (1549400-1549551) | |
980-1451, gnl|bosTau2|chr13 (47904115-47904585) | |
980-1451, gnl|canFam2|chr24 (26241747-26242075) | |
980-1451, gnl|canFam2|chrX (43770567-43770263) | |
980-1451, gnl|canFam2|chrX (43770566-43770263) | |
980-1451, gnl|canFam2|chrX (43770242-43770577) | |
980-1451, gnl|dasNov1|scaffold_223225 (1457-1173) | |
980-1451, gnl|dasNov1|scaffold_223225 (1471-1173) | |
980-1451, gnl|dasNov1|scaffold_75486 (6016-5690) | |
980-1451, gnl|dasNov1|scaffold_75486 (5669-5980) | |
980-1451, gnl|echTel1|scaffold_211645 (7734-8029) | |
980-1451, gnl|echTel1|scaffold_211645 (7734-8029) | |
980-1451, gnl|echTel1|scaffold_319012 (140514-140837) | |
980-1451, gnl|echTel1|scaffold_319012 (140858-140545) | |
980-1451, gnl|galGal2|chr20 (1568109-1567830) | |
980-1451, gnl|galGal2|chr20 (1568127-1567830) | |
980-1451, gnl|galGal2|chr20 (1568164-1567830) | |
980-1451, gnl|galGal2|chr20 (1567809-1568126) | |
980-1451, gnl|hg17|chr10 (94418180-94418482) | |
980-1451, gnl|hg17|chr11 (27618745-27619068) | |
980-1451, gnl|hg17|chr2 (57186824-57187135) | |
980-1451, gnl|hg17|chr20 (32140873-32141197) | |
980-1451, gnl|Hg17|chr20 (32141372-32140907) | |
980-1451, gnl|mm7|chr2 (154613259-154613583) | |
980-1451, gnl|Mm7|chr2 (154613758-154613293) | |
980-1451, gnl|mm7|chr8 (50968535-50968806) | |
980-1451, gnl|mm7|chr8 (50968512-50968806) | |
980-1451, gnl|mm7|chr8 (50968824-50968508) | |
980-1451, gnl|monDom2|scaffold_6 (102403946-102404247) | |
980-1451, gnl|monDom2|scaffold_6 (102403946-102404247) | |
980-1451, gnl|monDom2|scaffold_6 (12963387-12963049) | |
980-1451, gnl|monDom2|scaffold_6 (12963028-12963350) | |
980-1451, gnl|oryCun1|scaffold_158452 (3009-3301) | |
980-1451, gnl|oryCun1|scaffold_206370 (16413-16120) | |
980-1451, gnl|oryCun1|scaffold_206370 (16448-16120) | |
980-1451, gnl|oryCun1|scaffold_206370 (16102-16412) | |
980-1451, gnl|panTro1|chr12 (59317075-59317386) | |
980-1451, gnl|panTro1|chr21 (34109418-34109740) | |
980-1451, gnl|panTro1|chr8 (96176693-96176995) | |
980-1451, gnl|panTro1|chr9 (27917335-27917658) | |
980-1451, gnl|rheMac2|chr10 (30500190-30499861) | |
980-1451, gnl|rheMac2|chr13 (57308940-57309248) | |
980-1451, gnl|rheMac2|chr14 (44167034-44166696) | |
980-1451, gnl|rheMac2|chr9 (92138861-92139163) | |
980-1451, gnl|rn3|chr3 (145252049-145252369) | |
980-1451, gnl|rn3|chr6 (109056149-109055878) | |
980-1451, gnl|rn3|chr6 (109056163-109055878) | |
980-1451, gnl|rn3|chr6 (109055860-109056161) | |
980-1451, gnl|xenTro1|scaffold_35 (1552228-1551874) | |
980-1451, gnl|xenTro1|scaffold_35 (1552196-1551874) | |
980-1451, gnl|xenTro1|scaffold_35 (1552254-1551874) |
Expressed library(ies): 48 entry(ies) | More info |
Expressed library(ies): 48 entry(ies) | Help | Less info |
tbr (1.85014) | |
cte (1.4637) | |
csk (1.40746) | |
ldo (0.970026) | |
cmu (0.745573) | |
vin (0.665115) | |
tra (0.61546) | |
sme (0.610874) | |
lin (0.582411) | |
ski (0.440205) | |
spl (0.429553) | |
nms (0.427716) | |
aor (0.390549) | |
col (0.390016) | |
thg (0.380373) | |
mgm (0.360685) | |
duo (0.345602) | |
eye (0.341006) | |
fco (0.314416) | |
lun (0.300978) | |
isp (0.300752) | |
bfe (0.299715) | |
hyp (0.285673) | |
lnt (0.284616) | |
ste (0.270416) | |
lyg (0.266205) | |
ute (0.265569) | |
cov (0.264306) | |
kid (0.259471) | |
ova (0.258264) | |
bla (0.248694) | |
ecc (0.23007) | |
eje (0.197668) | |
sag (0.182715) | |
ill (0.175593) | |
ton (0.1755) | |
rec (0.17307) | |
cki (0.165235) | |
csp (0.161186) | |
fat (0.147427) | |
liv (0.146284) | |
che (0.136314) | |
ssp (0.13552) | |
ret (0.128733) | |
sug (0.127291) | |
clu (0.119646) | |
spc (0.113366) | |
nbm (0.0993246) |
Expressed library(ies): 48 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
tbr (1.85014) | |
cte (1.4637) | |
csk (1.40746) | |
ldo (0.970026) | |
cmu (0.745573) | |
vin (0.665115) | |
tra (0.61546) | |
sme (0.610874) | |
lin (0.582411) | |
ski (0.440205) | |
spl (0.429553) | |
nms (0.427716) | |
aor (0.390549) | |
col (0.390016) | |
thg (0.380373) | |
mgm (0.360685) | |
duo (0.345602) | |
eye (0.341006) | |
fco (0.314416) | |
lun (0.300978) | |
isp (0.300752) | |
bfe (0.299715) | |
hyp (0.285673) | |
lnt (0.284616) | |
ste (0.270416) | |
lyg (0.266205) | |
ute (0.265569) | |
cov (0.264306) | |
kid (0.259471) | |
ova (0.258264) | |
bla (0.248694) | |
ecc (0.23007) | |
eje (0.197668) | |
sag (0.182715) | |
ill (0.175593) | |
ton (0.1755) | |
rec (0.17307) | |
cki (0.165235) | |
csp (0.161186) | |
fat (0.147427) | |
liv (0.146284) | |
che (0.136314) | |
ssp (0.13552) | |
ret (0.128733) | |
sug (0.127291) | |
clu (0.119646) | |
spc (0.113366) | |
nbm (0.0993246) |