Ss1.1-Spl1-SPL01C010085.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTTAAGAGCATCAACAAGGGCCGGAAGATGAACATTATCGACTCGATGCTGCGGATGCT GGAGCAGTACTCCAGCAACCTGGAGGACCTGATCCGGGAGCGCACAGAGGAGCTGGAGCT GGAAAAGCAGAAGACGGACCGGCTGCTCACACAGATGCTGCCTCCGTCTGTGGCAGAGGC TCTGAAGATGGGGACCCCTGTGGAGCCTGAGTATTTCGAGGAGGTGACACTGTACTTCAG TGACATTGTGGGTTTCACCACCATCTCAGCCATGAGTGAGCCCATCGAAGTCGTGGACCT ACTCAACGACCTCTACACGCTTTTCGATGCCATCATCGGCTCCCATGATGTCTACAAGGT GGAGACGATTGGGGACGCCTACATGGTGGCCTCAGGGCTGCCCCAGCGCAACGGGCAGCG GCACGCGGCGGAGATCGCCAACATGGCCCTGGACATCCTCAGCGCCGTGGGCTCCTTCCG CATGCGCCACATGCCCGAGGTGCCCGTGCGCATCCGCATCGGCCTGCACTCGGGCCCGTG CGTGGCGGGCGTGGTGGGCCTCACCATGCCGCGGTACTGCCTGTTCGGGGACACGGTCAA CACGGCCTCGCGCATGGAGTCCACAGGGCTGCCTTACCGCATCCACGTGAACATGAGCAC CGTGCGGATCCTCTGCGCCCTAGACCAGGGCTTCCAGACGGAGGTGCGGGGCCGCACCGA GCTGAAGGGCAAGGGCGCCGAGGACACGTACTGGCTGGTGGGCAGACGCGGCTTCAACAA GCCCATCCCCAAACCGCCTGACCTGCAACCGGGGGCCAGCAACCACGGCATCAGCCTGCA GGAGATTCCCCCCGAGCGGCGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTTAAGAGCATCAACAAGGGCCGGAAGATGAACATTATCGACTCGATGCTGCGGATGCT GGAGCAGTACTCCAGCAACCTGGAGGACCTGATCCGGGAGCGCACAGAGGAGCTGGAGCT GGAAAAGCAGAAGACGGACCGGCTGCTCACACAGATGCTGCCTCCGTCTGTGGCAGAGGC TCTGAAGATGGGGACCCCTGTGGAGCCTGAGTATTTCGAGGAGGTGACACTGTACTTCAG TGACATTGTGGGTTTCACCACCATCTCAGCCATGAGTGAGCCCATCGAAGTCGTGGACCT ACTCAACGACCTCTACACGCTTTTCGATGCCATCATCGGCTCCCATGATGTCTACAAGGT GGAGACGATTGGGGACGCCTACATGGTGGCCTCAGGGCTGCCCCAGCGCAACGGGCAGCG GCACGCGGCGGAGATCGCCAACATGGCCCTGGACATCCTCAGCGCCGTGGGCTCCTTCCG CATGCGCCACATGCCCGAGGTGCCCGTGCGCATCCGCATCGGCCTGCACTCGGGCCCGTG CGTGGCGGGCGTGGTGGGCCTCACCATGCCGCGGTACTGCCTGTTCGGGGACACGGTCAA CACGGCCTCGCGCATGGAGTCCACAGGGCTGCCTTACCGCATCCACGTGAACATGAGCAC CGTGCGGATCCTCTGCGCCCTAGACCAGGGCTTCCAGACGGAGGTGCGGGGCCGCACCGA GCTGAAGGGCAAGGGCGCCGAGGACACGTACTGGCTGGTGGGCAGACGCGGCTTCAACAA GCCCATCCCCAAACCGCCTGACCTGCAACCGGGGGCCAGCAACCACGGCATCAGCCTGCA GGAGATTCCCCCCGAGCGGCGCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-173, gnl|bosTau2|chr13 (22509653-22509823) | |
| 1-173, gnl|canFam2|chr21 (25019844-25019719) | |
| 1-173, gnl|danRer3|chrUn (97371854-97371979) | |
| 1-173, gnl|dasNov1|scaffold_35611 (9586-9461) | |
| 1-173, gnl|echTel1|scaffold_101650 (1692-1817) | |
| 1-173, gnl|fr1|chrUn (150675722-150675597) | |
| 1-173, gnl|galGal2|chr1_random (466580-466455) | |
| 1-173, gnl|hg17|chr11 (76092847-76092972) | |
| 1-173, gnl|Hg17|chr11 (76093017-76092845) | |
| 1-173, gnl|loxAfr1|scaffold_15011 (54806-54681) | |
| 1-173, gnl|mm7|chr7 (94496007-94495882) | |
| 1-173, gnl|Mm7|chr7 (94495835-94496006) | |
| 1-173, gnl|monDom2|scaffold_46 (14252762-14252637) | |
| 1-173, gnl|oryCun1|scaffold_191171 (10101-10225) | |
| 1-173, gnl|panTro1|chr9 (77390662-77390787) | |
| 1-173, gnl|rheMac2|chr14 (74876991-74877116) | |
| 1-173, gnl|rn3|chr1 (155814608-155814483) | |
| 1-173, gnl|tetNig1|chrUn_random (14449934-14449810) | |
| 1-173, gnl|xenTro1|scaffold_694 (461248-461372) | |
| 348-562, gnl|bosTau2|chr13 (22517697-22517909) | |
| 348-562, gnl|Hg17|chr11 (76085618-76085389) | |
| 348-562, gnl|Mm7|chr7 (94502908-94503125) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-173, gnl|bosTau2|chr13 (22509653-22509823) | |
| 1-173, gnl|canFam2|chr21 (25019844-25019719) | |
| 1-173, gnl|danRer3|chrUn (97371854-97371979) | |
| 1-173, gnl|dasNov1|scaffold_35611 (9586-9461) | |
| 1-173, gnl|echTel1|scaffold_101650 (1692-1817) | |
| 1-173, gnl|fr1|chrUn (150675722-150675597) | |
| 1-173, gnl|galGal2|chr1_random (466580-466455) | |
| 1-173, gnl|hg17|chr11 (76092847-76092972) | |
| 1-173, gnl|Hg17|chr11 (76093017-76092845) | |
| 1-173, gnl|loxAfr1|scaffold_15011 (54806-54681) | |
| 1-173, gnl|mm7|chr7 (94496007-94495882) | |
| 1-173, gnl|Mm7|chr7 (94495835-94496006) | |
| 1-173, gnl|monDom2|scaffold_46 (14252762-14252637) | |
| 1-173, gnl|oryCun1|scaffold_191171 (10101-10225) | |
| 1-173, gnl|panTro1|chr9 (77390662-77390787) | |
| 1-173, gnl|rheMac2|chr14 (74876991-74877116) | |
| 1-173, gnl|rn3|chr1 (155814608-155814483) | |
| 1-173, gnl|tetNig1|chrUn_random (14449934-14449810) | |
| 1-173, gnl|xenTro1|scaffold_694 (461248-461372) | |
| 348-562, gnl|bosTau2|chr13 (22517697-22517909) | |
| 348-562, gnl|Hg17|chr11 (76085618-76085389) | |
| 348-562, gnl|Mm7|chr7 (94502908-94503125) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) |