Ss1.1-Spl1-SPL01C020099.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAGATGCCATCATAGCCAAATTGGCTAATCAGGCTGCAGATTATTTTGGTGATGCTTTT AAACAGTGTCAGTACAAAGATACTCTTCCCAAGGAGGTGTTTCCTGTCTTGGCTGCAAAG CACTGTATCATGCAGGCCAATGCTGAGTACCACCAGTCAATCCTGGCAAAACAGCAAAAG AAATTTGGAGAAGAGATTGCAAGGTTACAGCATGCAGCTGAATTGATTAAAACTGTGGCA TCTCGCTATGATGAATATGTCAATGTGAAGGATTTTTCTGACAAAATCAGCCGTGCCCTT ACTGCAGCAAAGAAGGATAATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT CTAGACCCTATTGGCAAAGCCACACTTGTGAAATCTACCCCAGTCAATGTACCCATCAGC CAGAAATTCACTGATCTGTTTGAGAAGATGGTTCCTGTGTCAGTGCAGCAGTCATTGGCT GCCTATAATCAGAGAAAAGCTGATTTAGTTAACAGATCGATTGCTCAAATGAGAGAAGCC ACCACTTTGGCAAATGGGGTGTTAGCTTCCCTTAATCTTCCAGCAGCAATTGAAGATATA TCTGGAGATACTGTACCTCAGTCTATATTGAACAAGTCCACATCTGTAATTGAACAAGGA GGCATCCAGACTGTTGATCAATTGATTAAAGAGCTCCCTGAGCTTCTGCAAAGAAATAGA GAAATCCTTGATGAGTCATTAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAGATGCCATCATAGCCAAATTGGCTAATCAGGCTGCAGATTATTTTGGTGATGCTTTT AAACAGTGTCAGTACAAAGATACTCTTCCCAAGGAGGTGTTTCCTGTCTTGGCTGCAAAG CACTGTATCATGCAGGCCAATGCTGAGTACCACCAGTCAATCCTGGCAAAACAGCAAAAG AAATTTGGAGAAGAGATTGCAAGGTTACAGCATGCAGCTGAATTGATTAAAACTGTGGCA TCTCGCTATGATGAATATGTCAATGTGAAGGATTTTTCTGACAAAATCAGCCGTGCCCTT ACTGCAGCAAAGAAGGATAATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT CTAGACCCTATTGGCAAAGCCACACTTGTGAAATCTACCCCAGTCAATGTACCCATCAGC CAGAAATTCACTGATCTGTTTGAGAAGATGGTTCCTGTGTCAGTGCAGCAGTCATTGGCT GCCTATAATCAGAGAAAAGCTGATTTAGTTAACAGATCGATTGCTCAAATGAGAGAAGCC ACCACTTTGGCAAATGGGGTGTTAGCTTCCCTTAATCTTCCAGCAGCAATTGAAGATATA TCTGGAGATACTGTACCTCAGTCTATATTGAACAAGTCCACATCTGTAATTGAACAAGGA GGCATCCAGACTGTTGATCAATTGATTAAAGAGCTCCCTGAGCTTCTGCAAAGAAATAGA GAAATCCTTGATGAGTCATTAAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 209-439, gnl|bosTau2|chr22 (6051152-6051382) | |
| 209-439, gnl|canFam2|chr23 (7162945-7163209) | |
| 209-439, gnl|danRer3|chr19 (69277130-69276868) | |
| 209-439, gnl|dasNov1|scaffold_76936 (357-611) | |
| 209-439, gnl|fr1|chrUn (181405430-181405163) | |
| 209-439, gnl|galGal2|chr2 (43942596-43942862) | |
| 209-439, gnl|hg17|chr3 (33852516-33852783) | |
| 209-439, gnl|Hg17|chr3 (33852538-33852768) | |
| 209-439, gnl|loxAfr1|scaffold_2727 (47309-47576) | |
| 209-439, gnl|mm7|chr9 (113385837-113385579) | |
| 209-439, gnl|Mm7|chr9 (113385821-113385592) | |
| 209-439, gnl|monDom2|scaffold_170 (1219014-1218761) | |
| 209-439, gnl|oryCun1|scaffold_145065 (3689-3437) | |
| 209-439, gnl|panTro1|chr2 (34868740-34869007) | |
| 209-439, gnl|rheMac2|chr2 (176295400-176295667) | |
| 209-439, gnl|rn3|chr8 (118342310-118342053) | |
| 209-439, gnl|tetNig1|chr21 (1253321-1253067) | |
| 209-439, gnl|xenTro1|scaffold_906 (231903-232144) | |
| 557-735, gnl|bosTau2|chr22 (6058633-6058811) | |
| 557-735, gnl|canFam2|chr23 (7166914-7167108) | |
| 557-735, gnl|canFam2|chr23 (7167099-7166906) | |
| 557-735, gnl|danRer3|chr19 (69274935-69274749) | |
| 557-735, gnl|danRer3|chr19 (69274752-69274935) | |
| 557-735, gnl|dasNov1|scaffold_76936 (4860-5054) | |
| 557-735, gnl|dasNov1|scaffold_76936 (5045-4850) | |
| 557-735, gnl|echTel1|scaffold_283087 (86652-86846) | |
| 557-735, gnl|echTel1|scaffold_283087 (86837-86640) | |
| 557-735, gnl|fr1|chrUn (181404616-181404428) | |
| 557-735, gnl|fr1|chrUn (181404431-181404624) | |
| 557-735, gnl|galGal2|chr2 (43944424-43944618) | |
| 557-735, gnl|galGal2|chr2 (43944609-43944418) | |
| 557-735, gnl|hg17|chr15 (20693899-20694092) | |
| 557-735, gnl|hg17|chr3 (33858390-33858584) | |
| 557-735, gnl|Hg17|chr3 (33858392-33858570) | |
| 557-735, gnl|loxAfr1|scaffold_2727 (51213-51407) | |
| 557-735, gnl|loxAfr1|scaffold_2727 (51398-51194) | |
| 557-735, gnl|mm7|chr9 (113380151-113379957) | |
| 557-735, gnl|mm7|chr9 (113379966-113380160) | |
| 557-735, gnl|Mm7|chr9 (113380147-113379969) | |
| 557-735, gnl|monDom2|scaffold_170 (1216871-1216683) | |
| 557-735, gnl|monDom2|scaffold_170 (1216686-1216879) | |
| 557-735, gnl|oryCun1|scaffold_145065 (189-4) | |
| 557-735, gnl|oryCun1|scaffold_145065 (4-198) | |
| 557-735, gnl|panTro1|chr16_random (412435-412241) | |
| 557-735, gnl|panTro1|chr2 (34874302-34874497) | |
| 557-735, gnl|rheMac2|chr2 (176299972-176300166) | |
| 557-735, gnl|rheMac2|chr2 (176300157-176299964) | |
| 557-735, gnl|rn3|chr8 (118338761-118338567) | |
| 557-735, gnl|rn3|chr8 (118338576-118338770) | |
| 557-735, gnl|tetNig1|chr21 (1252363-1252180) | |
| 557-735, gnl|tetNig1|chr21 (1252180-1252363) | |
| 557-735, gnl|xenTro1|scaffold_906 (234371-234555) | |
| 557-735, gnl|xenTro1|scaffold_906 (234555-234363) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 209-439, gnl|bosTau2|chr22 (6051152-6051382) | |
| 209-439, gnl|canFam2|chr23 (7162945-7163209) | |
| 209-439, gnl|danRer3|chr19 (69277130-69276868) | |
| 209-439, gnl|dasNov1|scaffold_76936 (357-611) | |
| 209-439, gnl|fr1|chrUn (181405430-181405163) | |
| 209-439, gnl|galGal2|chr2 (43942596-43942862) | |
| 209-439, gnl|hg17|chr3 (33852516-33852783) | |
| 209-439, gnl|Hg17|chr3 (33852538-33852768) | |
| 209-439, gnl|loxAfr1|scaffold_2727 (47309-47576) | |
| 209-439, gnl|mm7|chr9 (113385837-113385579) | |
| 209-439, gnl|Mm7|chr9 (113385821-113385592) | |
| 209-439, gnl|monDom2|scaffold_170 (1219014-1218761) | |
| 209-439, gnl|oryCun1|scaffold_145065 (3689-3437) | |
| 209-439, gnl|panTro1|chr2 (34868740-34869007) | |
| 209-439, gnl|rheMac2|chr2 (176295400-176295667) | |
| 209-439, gnl|rn3|chr8 (118342310-118342053) | |
| 209-439, gnl|tetNig1|chr21 (1253321-1253067) | |
| 209-439, gnl|xenTro1|scaffold_906 (231903-232144) | |
| 557-735, gnl|bosTau2|chr22 (6058633-6058811) | |
| 557-735, gnl|canFam2|chr23 (7166914-7167108) | |
| 557-735, gnl|canFam2|chr23 (7167099-7166906) | |
| 557-735, gnl|danRer3|chr19 (69274935-69274749) | |
| 557-735, gnl|danRer3|chr19 (69274752-69274935) | |
| 557-735, gnl|dasNov1|scaffold_76936 (4860-5054) | |
| 557-735, gnl|dasNov1|scaffold_76936 (5045-4850) | |
| 557-735, gnl|echTel1|scaffold_283087 (86652-86846) | |
| 557-735, gnl|echTel1|scaffold_283087 (86837-86640) | |
| 557-735, gnl|fr1|chrUn (181404616-181404428) | |
| 557-735, gnl|fr1|chrUn (181404431-181404624) | |
| 557-735, gnl|galGal2|chr2 (43944424-43944618) | |
| 557-735, gnl|galGal2|chr2 (43944609-43944418) | |
| 557-735, gnl|hg17|chr15 (20693899-20694092) | |
| 557-735, gnl|hg17|chr3 (33858390-33858584) | |
| 557-735, gnl|Hg17|chr3 (33858392-33858570) | |
| 557-735, gnl|loxAfr1|scaffold_2727 (51213-51407) | |
| 557-735, gnl|loxAfr1|scaffold_2727 (51398-51194) | |
| 557-735, gnl|mm7|chr9 (113380151-113379957) | |
| 557-735, gnl|mm7|chr9 (113379966-113380160) | |
| 557-735, gnl|Mm7|chr9 (113380147-113379969) | |
| 557-735, gnl|monDom2|scaffold_170 (1216871-1216683) | |
| 557-735, gnl|monDom2|scaffold_170 (1216686-1216879) | |
| 557-735, gnl|oryCun1|scaffold_145065 (189-4) | |
| 557-735, gnl|oryCun1|scaffold_145065 (4-198) | |
| 557-735, gnl|panTro1|chr16_random (412435-412241) | |
| 557-735, gnl|panTro1|chr2 (34874302-34874497) | |
| 557-735, gnl|rheMac2|chr2 (176299972-176300166) | |
| 557-735, gnl|rheMac2|chr2 (176300157-176299964) | |
| 557-735, gnl|rn3|chr8 (118338761-118338567) | |
| 557-735, gnl|rn3|chr8 (118338576-118338770) | |
| 557-735, gnl|tetNig1|chr21 (1252363-1252180) | |
| 557-735, gnl|tetNig1|chr21 (1252180-1252363) | |
| 557-735, gnl|xenTro1|scaffold_906 (234371-234555) | |
| 557-735, gnl|xenTro1|scaffold_906 (234555-234363) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |