Ss1.1-Spl1-SPL01D100102.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTTCCGGTGGCTGCTCCCCGCTGGCTCCAGGCTCTGGGTAACCCAGGCCAAGTGATCAC GCGCAGCCGATCCCTCTGGAGGCTTCCCCTCTGTGCCCGGGAGCGGAGCAGCGGCCGGGA GGTCTCCCCGCGCCTGTGCCACGCGGCCGCCTCCTCCGAGGCGCTGCGATGTGCTGCGAG AAGTGGAGTCGCGTGGCCGAAATGTGTCTCTTCCTGGAAGACCTGCAGGAGGGCTCCCGG ATCCTATGCTTCTGCTCTCGGGCGTTCGTGGAAGATCGGAAATTGTACAATTTGGGATTA AAAGGCTACTATGTGAAAGACAATGGCAACAATGCAGGAGACCAGCTGACAGAAGAGGAG GAGGAGAGTAGTCATTCCGAGGGCCCTGTGGAGTCACGCGACAGCAGAGCCCCAGGCCCA GATGAAAGTGAACTTGATTCTGAGGCTGAACTGATGAGAAGTATGGGGCTGCCACTGCAG TTTGGTGGGATGTCTGTGCATAAGAATTTCGAGGTATCTATGAATACTAGAAACAGAGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTTCCGGTGGCTGCTCCCCGCTGGCTCCAGGCTCTGGGTAACCCAGGCCAAGTGATCAC GCGCAGCCGATCCCTCTGGAGGCTTCCCCTCTGTGCCCGGGAGCGGAGCAGCGGCCGGGA GGTCTCCCCGCGCCTGTGCCACGCGGCCGCCTCCTCCGAGGCGCTGCGATGTGCTGCGAG AAGTGGAGTCGCGTGGCCGAAATGTGTCTCTTCCTGGAAGACCTGCAGGAGGGCTCCCGG ATCCTATGCTTCTGCTCTCGGGCGTTCGTGGAAGATCGGAAATTGTACAATTTGGGATTA AAAGGCTACTATGTGAAAGACAATGGCAACAATGCAGGAGACCAGCTGACAGAAGAGGAG GAGGAGAGTAGTCATTCCGAGGGCCCTGTGGAGTCACGCGACAGCAGAGCCCCAGGCCCA GATGAAAGTGAACTTGATTCTGAGGCTGAACTGATGAGAAGTATGGGGCTGCCACTGCAG TTTGGTGGGATGTCTGTGCATAAGAATTTCGAGGTATCTATGAATACTAGAAACAGAGTT |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 86-272, gnl|bosTau2|chr14 (11880427-11880240) | |
| 86-272, gnl|canFam2|chr29 (10245524-10245847) | |
| 86-272, gnl|dasNov1|scaffold_7972 (60676-60356) | |
| 86-272, gnl|echTel1|scaffold_291860 (3309-3608) | |
| 86-272, gnl|galGal2|chr2 (110272723-110273048) | |
| 86-272, gnl|hg17|chr8 (56848524-56848840) | |
| 86-272, gnl|Hg17|chr8 (56848649-56848832) | |
| 86-272, gnl|loxAfr1|scaffold_68555 (7116-6805) | |
| 86-272, gnl|mm7|chr4 (3501992-3502284) | |
| 86-272, gnl|Mm7|chr4 (3502094-3502276) | |
| 86-272, gnl|oryCun1|scaffold_178237 (502-807) | |
| 86-272, gnl|panTro1|chr7 (58550521-58550837) | |
| 86-272, gnl|rheMac2|chr8 (58377558-58377874) | |
| 86-272, gnl|rn3|chr5 (16818361-16818656) | |
| 333-521, gnl|bosTau2|chr14 (11875663-11875478) | |
| 333-521, gnl|canFam2|chr29 (10253490-10253754) | |
| 333-521, gnl|dasNov1|scaffold_256097 (454-736) | |
| 333-521, gnl|echTel1|scaffold_302211 (944-1187) | |
| 333-521, gnl|hg17|chr8 (56860766-56861053) | |
| 333-521, gnl|Hg17|chr8 (56860827-56861012) | |
| 333-521, gnl|loxAfr1|scaffold_25623 (23209-22924) | |
| 333-521, gnl|mm7|chr4 (3512113-3512377) | |
| 333-521, gnl|Mm7|chr4 (3512173-3512343) | |
| 333-521, gnl|monDom2|scaffold_4 (108355877-108355638) | |
| 333-521, gnl|oryCun1|scaffold_193060 (10113-9828) | |
| 333-521, gnl|panTro1|chr7 (58562713-58563000) | |
| 333-521, gnl|rheMac2|chr8 (58390958-58391237) | |
| 333-521, gnl|rn3|chr5 (16823746-16824007) | |
| 333-521, gnl|xenTro1|scaffold_8 (2628290-2628582) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-272, gnl|bosTau2|chr14 (11880427-11880240) | |
| 86-272, gnl|canFam2|chr29 (10245524-10245847) | |
| 86-272, gnl|dasNov1|scaffold_7972 (60676-60356) | |
| 86-272, gnl|echTel1|scaffold_291860 (3309-3608) | |
| 86-272, gnl|galGal2|chr2 (110272723-110273048) | |
| 86-272, gnl|hg17|chr8 (56848524-56848840) | |
| 86-272, gnl|Hg17|chr8 (56848649-56848832) | |
| 86-272, gnl|loxAfr1|scaffold_68555 (7116-6805) | |
| 86-272, gnl|mm7|chr4 (3501992-3502284) | |
| 86-272, gnl|Mm7|chr4 (3502094-3502276) | |
| 86-272, gnl|oryCun1|scaffold_178237 (502-807) | |
| 86-272, gnl|panTro1|chr7 (58550521-58550837) | |
| 86-272, gnl|rheMac2|chr8 (58377558-58377874) | |
| 86-272, gnl|rn3|chr5 (16818361-16818656) | |
| 333-521, gnl|bosTau2|chr14 (11875663-11875478) | |
| 333-521, gnl|canFam2|chr29 (10253490-10253754) | |
| 333-521, gnl|dasNov1|scaffold_256097 (454-736) | |
| 333-521, gnl|echTel1|scaffold_302211 (944-1187) | |
| 333-521, gnl|hg17|chr8 (56860766-56861053) | |
| 333-521, gnl|Hg17|chr8 (56860827-56861012) | |
| 333-521, gnl|loxAfr1|scaffold_25623 (23209-22924) | |
| 333-521, gnl|mm7|chr4 (3512113-3512377) | |
| 333-521, gnl|Mm7|chr4 (3512173-3512343) | |
| 333-521, gnl|monDom2|scaffold_4 (108355877-108355638) | |
| 333-521, gnl|oryCun1|scaffold_193060 (10113-9828) | |
| 333-521, gnl|panTro1|chr7 (58562713-58563000) | |
| 333-521, gnl|rheMac2|chr8 (58390958-58391237) | |
| 333-521, gnl|rn3|chr5 (16823746-16824007) | |
| 333-521, gnl|xenTro1|scaffold_8 (2628290-2628582) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.140036) | |
| che (0.136314) |