Non-Coding RNA Search

Ss1.1-Spl1-SPL01D110084.5

Sequence:


               
               TTTACCTTCAGAAATATTAAAATTAAAAAAAAAAGATTATCATACTAAGTGAAGTAAGCC
AGACAAAGACAAATATATGATATTCCTTATATGTGGGATCTAAAAAAAATGATACAAATG
AATTTATATTCAAAACAGACCCATAAGCATAGAAAACAAACTTACGGTTACCAGAGGGAA
AGGAAGGAGGAATAAATTAGGAGTTTAGGGTTAACATATATAAACCACTAAATGTAAAAT
AGGTAACCAACAAGGACCTAATGCATAGCACAGGGAACTATACTCAGTATTTGAGTATAA
AGGAAAAGAATCTGAAAAAAATACATATGTATGTATTTATAATTGAAACACTTTGCTGTA
CACCTAAAACTAACACAATATGGTAAATAACTACGCTCCATTTTTTTTTAAATGGAAAAA
TGAATAAATATGGTTCCAAAAAGTGCATCATGGGAGTTCCCGTTGTGGCCCAAGGGTAAT
GAACCCGACTAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAAAAAAAAAAAAAAAAGTGCATCACATTTTA
ATCATACCCTTGCCTTTCCAAAGCCCGAGTTTCCTGTTTTATACCACTAACTGGGTGAAG
AAGGAACATTTGAACCATCTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTACCTTCAGAAATATTAAAATTAAAAAAAAAAGATTATCATACTAAGTGAAGTAAGCC
AGACAAAGACAAATATATGATATTCCTTATATGTGGGATCTAAAAAAAATGATACAAATG
AATTTATATTCAAAACAGACCCATAAGCATAGAAAACAAACTTACGGTTACCAGAGGGAA
AGGAAGGAGGAATAAATTAGGAGTTTAGGGTTAACATATATAAACCACTAAATGTAAAAT
AGGTAACCAACAAGGACCTAATGCATAGCACAGGGAACTATACTCAGTATTTGAGTATAA
AGGAAAAGAATCTGAAAAAAATACATATGTATGTATTTATAATTGAAACACTTTGCTGTA
CACCTAAAACTAACACAATATGGTAAATAACTACGCTCCATTTTTTTTTAAATGGAAAAA
TGAATAAATATGGTTCCAAAAAGTGCATCATGGGAGTTCCCGTTGTGGCCCAAGGGTAAT
GAACCCGACTAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAAAAAAAAAAAAAAAAGTGCATCACATTTTA
ATCATACCCTTGCCTTTCCAAAGCCCGAGTTTCCTGTTTTATACCACTAACTGGGTGAAG
AAGGAACATTTGAACCATCTAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               5-442, gnl|bosTau2|chr1 (24778190-24777739)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-442, gnl|bosTau2|chr1 (24778190-24777739)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)