Ss1.1-Spl1-SPL01D120030.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTAAGCACTACAAAATCAGAAGCCTGGACAATGGGGGTTATTACATCTCCCCACGAATC ACTTTTCCTTGTATCAGTGACATGATTAAGTATTACCAAAAGCAGTCGGATGGCTTGTGC AGAAGATTGGAGAAGGCGTGCATTAGCCCCAAACCACAGAAGCCATGGGACAAAGATGCG TGGGAGATCCCCCGGGAGTCCATTAAGCTGGTGAAGAGGCTCGGCGCTGGGCAGTTCGGG GAAGTCTGGATGGGTTACTACAACAATAGCACCAAAGTGGCTGTGAAAACCCTGAAGCCA GGCACGATGTCGGTGCAGGCGTTCCTGGAGGAGGCCAACCTCATGAAGACTCTGCAGCAC GACAAGCTGGTGAGGCTGTACGCCGTGGTCACCAAGGAGGAGCCCATCTACATCATCACC GAGTACATGGCCAAGGGCAGCTTGCTGGACTTCCTGAAGAGCGACGAAGGGGGCAAAGTG CTGCTTCCGAAGCTGATTGACTTCTCCGCTCAGATCGCGGAGGGAATGGCTTACATCGAG AGAAAGAACTACATTCACCGGGACCTTCGAGCCGCCAACGTCCTGGTCTCCGAGTCCCTC ATGTGCAAAATCGCAGATTTTGGCCTCGCCCGAGTCATTGAAGATAACGAGTACACAGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTAAGCACTACAAAATCAGAAGCCTGGACAATGGGGGTTATTACATCTCCCCACGAATC ACTTTTCCTTGTATCAGTGACATGATTAAGTATTACCAAAAGCAGTCGGATGGCTTGTGC AGAAGATTGGAGAAGGCGTGCATTAGCCCCAAACCACAGAAGCCATGGGACAAAGATGCG TGGGAGATCCCCCGGGAGTCCATTAAGCTGGTGAAGAGGCTCGGCGCTGGGCAGTTCGGG GAAGTCTGGATGGGTTACTACAACAATAGCACCAAAGTGGCTGTGAAAACCCTGAAGCCA GGCACGATGTCGGTGCAGGCGTTCCTGGAGGAGGCCAACCTCATGAAGACTCTGCAGCAC GACAAGCTGGTGAGGCTGTACGCCGTGGTCACCAAGGAGGAGCCCATCTACATCATCACC GAGTACATGGCCAAGGGCAGCTTGCTGGACTTCCTGAAGAGCGACGAAGGGGGCAAAGTG CTGCTTCCGAAGCTGATTGACTTCTCCGCTCAGATCGCGGAGGGAATGGCTTACATCGAG AGAAAGAACTACATTCACCGGGACCTTCGAGCCGCCAACGTCCTGGTCTCCGAGTCCCTC ATGTGCAAAATCGCAGATTTTGGCCTCGCCCGAGTCATTGAAGATAACGAGTACACAGCG |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 101-255, gnl|bosTau2|chr14 (11727447-11727293) | |
| 101-255, gnl|canFam2|chr29 (10400662-10400860) | |
| 101-255, gnl|danRer3|chr21 (27006085-27005926) | |
| 101-255, gnl|dasNov1|scaffold_52978 (4083-3889) | |
| 101-255, gnl|echTel1|scaffold_321073 (42685-42838) | |
| 101-255, gnl|fr1|chrUn (272061339-272061161) | |
| 101-255, gnl|galGal2|chr2 (110373090-110373282) | |
| 101-255, gnl|hg17|chr8 (57028909-57029107) | |
| 101-255, gnl|Hg17|chr8 (57028945-57029099) | |
| 101-255, gnl|loxAfr1|scaffold_96941 (3147-2950) | |
| 101-255, gnl|mm7|chr4 (3675773-3675970) | |
| 101-255, gnl|Mm7|chr4 (3675808-3675962) | |
| 101-255, gnl|monDom2|scaffold_4 (108115387-108115210) | |
| 101-255, gnl|oryCun1|scaffold_199689 (156130-156317) | |
| 101-255, gnl|panTro1|chr7 (58737008-58737206) | |
| 101-255, gnl|rheMac2|chr8 (58560379-58560577) | |
| 101-255, gnl|rn3|chr5 (17013638-17013833) | |
| 101-255, gnl|tetNig1|chrUn_random (16184270-16184426) | |
| 101-255, gnl|xenTro1|scaffold_8 (2692411-2692599) | |
| 258-448, gnl|bosTau2|chr4 (44032595-44032784) | |
| 258-448, gnl|canFam2|chr24 (24470846-24471031) | |
| 258-448, gnl|danRer3|chr21 (27003478-27003290) | |
| 258-448, gnl|dasNov1|scaffold_38242 (3736-3921) | |
| 258-448, gnl|echTel1|scaffold_300799 (2118-2302) | |
| 258-448, gnl|fr1|chrUn (272061087-272060900) | |
| 258-448, gnl|galGal2|chr20 (9675768-9675951) | |
| 258-448, gnl|hg17|chr20 (30138090-30138275) | |
| 258-448, gnl|Hg17|chr20 (30138096-30138285) | |
| 258-448, gnl|loxAfr1|scaffold_3257 (137006-137191) | |
| 258-448, gnl|mm7|chr2 (152877553-152877738) | |
| 258-448, gnl|Mm7|chr2 (152877559-152877740) | |
| 258-448, gnl|monDom2|scaffold_38 (998799-998611) | |
| 258-448, gnl|oryCun1|scaffold_211260 (58300-58115) | |
| 258-448, gnl|panTro1|chr21 (31838235-31838420) | |
| 258-448, gnl|rheMac2|chr10 (32486491-32486306) | |
| 258-448, gnl|rn3|chr3 (143382122-143382307) | |
| 258-448, gnl|tetNig1|chrUn_random (16185100-16185288) | |
| 258-448, gnl|xenTro1|scaffold_523 (727813-727998) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 101-255, gnl|bosTau2|chr14 (11727447-11727293) | |
| 101-255, gnl|canFam2|chr29 (10400662-10400860) | |
| 101-255, gnl|danRer3|chr21 (27006085-27005926) | |
| 101-255, gnl|dasNov1|scaffold_52978 (4083-3889) | |
| 101-255, gnl|echTel1|scaffold_321073 (42685-42838) | |
| 101-255, gnl|fr1|chrUn (272061339-272061161) | |
| 101-255, gnl|galGal2|chr2 (110373090-110373282) | |
| 101-255, gnl|hg17|chr8 (57028909-57029107) | |
| 101-255, gnl|Hg17|chr8 (57028945-57029099) | |
| 101-255, gnl|loxAfr1|scaffold_96941 (3147-2950) | |
| 101-255, gnl|mm7|chr4 (3675773-3675970) | |
| 101-255, gnl|Mm7|chr4 (3675808-3675962) | |
| 101-255, gnl|monDom2|scaffold_4 (108115387-108115210) | |
| 101-255, gnl|oryCun1|scaffold_199689 (156130-156317) | |
| 101-255, gnl|panTro1|chr7 (58737008-58737206) | |
| 101-255, gnl|rheMac2|chr8 (58560379-58560577) | |
| 101-255, gnl|rn3|chr5 (17013638-17013833) | |
| 101-255, gnl|tetNig1|chrUn_random (16184270-16184426) | |
| 101-255, gnl|xenTro1|scaffold_8 (2692411-2692599) | |
| 258-448, gnl|bosTau2|chr4 (44032595-44032784) | |
| 258-448, gnl|canFam2|chr24 (24470846-24471031) | |
| 258-448, gnl|danRer3|chr21 (27003478-27003290) | |
| 258-448, gnl|dasNov1|scaffold_38242 (3736-3921) | |
| 258-448, gnl|echTel1|scaffold_300799 (2118-2302) | |
| 258-448, gnl|fr1|chrUn (272061087-272060900) | |
| 258-448, gnl|galGal2|chr20 (9675768-9675951) | |
| 258-448, gnl|hg17|chr20 (30138090-30138275) | |
| 258-448, gnl|Hg17|chr20 (30138096-30138285) | |
| 258-448, gnl|loxAfr1|scaffold_3257 (137006-137191) | |
| 258-448, gnl|mm7|chr2 (152877553-152877738) | |
| 258-448, gnl|Mm7|chr2 (152877559-152877740) | |
| 258-448, gnl|monDom2|scaffold_38 (998799-998611) | |
| 258-448, gnl|oryCun1|scaffold_211260 (58300-58115) | |
| 258-448, gnl|panTro1|chr21 (31838235-31838420) | |
| 258-448, gnl|rheMac2|chr10 (32486491-32486306) | |
| 258-448, gnl|rn3|chr3 (143382122-143382307) | |
| 258-448, gnl|tetNig1|chrUn_random (16185100-16185288) | |
| 258-448, gnl|xenTro1|scaffold_523 (727813-727998) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |