Non-Coding RNA Search

Ss1.1-Spl1-SPL01F010063.5

Sequence:


               
               GCACCTGTGCAACAACTCCATCCAGAGACACCTGGAGAACTCGTGCCACCGGCACCCGCT
GCTGCCCTCGGACAACATGTGGTCGAGCAAGAAGTTCCAAGCCCACTTGCAGGAGATTGG
GGCCCCAAACGCCTGGTCAACTATCATCGTGCCTGGCATGAAGGCCGCGGTGATCCATGC
CCTCCAGACGTCCCAGGACACCGTGCAATGTCGCAAAGCCAGCTTCGAACTCTACGGCGC
TGACTTTGTATTCGGTGAGGACTTCCAGCCCTGGCTGATCGAGATCAATGCCAGCCCCAC
CATGGCGCCCTCCACGGCGGTCACTGCCCGGCTCTGTGCTGGAGTGCAAGCTGACACACT
GCGTGTGGTCATCGACCGGCGACTGGACCGCAACTGTGACACGGGAGCCTTTGAGCTCAT
CTACAAGCAGCCTGCTGTGGAGGTGCCCCAGTATGTGGGTATCCGGCTCCTAGTAGAGGG
TTCCACCATCAAGAAGCCCCTGGCGATGTGTCACCAGCGGACAGCGGTCCGCCCAGCCCT
CTCTCACCTGCTGACCCAGCGAGGCTCTGGGGAAGGCAAGGACTCGGGAACCCTTACCCA
CAGGTCAGCTTCTAGGAAAGTTGCTGGGGCCAGGAGCCTGGGGCACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCTGTGCAACAACTCCATCCAGAGACACCTGGAGAACTCGTGCCACCGGCACCCGCT
GCTGCCCTCGGACAACATGTGGTCGAGCAAGAAGTTCCAAGCCCACTTGCAGGAGATTGG
GGCCCCAAACGCCTGGTCAACTATCATCGTGCCTGGCATGAAGGCCGCGGTGATCCATGC
CCTCCAGACGTCCCAGGACACCGTGCAATGTCGCAAAGCCAGCTTCGAACTCTACGGCGC
TGACTTTGTATTCGGTGAGGACTTCCAGCCCTGGCTGATCGAGATCAATGCCAGCCCCAC
CATGGCGCCCTCCACGGCGGTCACTGCCCGGCTCTGTGCTGGAGTGCAAGCTGACACACT
GCGTGTGGTCATCGACCGGCGACTGGACCGCAACTGTGACACGGGAGCCTTTGAGCTCAT
CTACAAGCAGCCTGCTGTGGAGGTGCCCCAGTATGTGGGTATCCGGCTCCTAGTAGAGGG
TTCCACCATCAAGAAGCCCCTGGCGATGTGTCACCAGCGGACAGCGGTCCGCCCAGCCCT
CTCTCACCTGCTGACCCAGCGAGGCTCTGGGGAAGGCAAGGACTCGGGAACCCTTACCCA
CAGGTCAGCTTCTAGGAAAGTTGCTGGGGCCAGGAGCCTGGGGCACAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34532138|dbj|BAC86331.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34532138|dbj|BAC86331.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-430, gnl|bosTau2|chr22 (11967518-11967947)
               

               
               1-430, gnl|Hg17|chr3 (9845650-9846079)
               

               
               1-430, gnl|Mm7|chr6 (113569839-113570268)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-430, gnl|bosTau2|chr22 (11967518-11967947)
               

               
               1-430, gnl|Hg17|chr3 (9845650-9846079)
               

               
               1-430, gnl|Mm7|chr6 (113569839-113570268)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	1-430, gnl\|bosTau2\|chr22 (11967518-11967947)
	1-430, gnl\|Hg17\|chr3 (9845650-9846079)
	1-430, gnl\|Mm7\|chr6 (113569839-113570268)