Non-Coding RNA Search

Ss1.1-Spl1-SPL01F070075.5

Sequence:


               
               TTGTTATTATTACTGATTCAATTTTGGCTGGTCCCAGAAGAGGGTCTGAGAACAGTTTGG
GGCCACAGCCTGTAGGATTGTGAGGTTTTTTGCACTTAGTGTCTGCCCCCTGCCCTCTGG
AGGCTGTCCAGAGGCTGGTGTAGGCTTCCTGGAGGGCAGGGCCTGTGCCTGCCCACTGGG
GAGTAGAGCTGGGTCTTGGCCTGCTGGTGGGTAGTGCCAAGGCTTGGGTGGCTCTGCAAA
GTCTTTAGGCAGTCTCTCTGCTGATGGGTGGGGCTGTGTCCCAGTTCAGTTAGTTGTTTG
GCTTGAGGCATCCCAGCACTGGTGCCTAAAGCAGTTGCGGGGGGAGGCAGGTCTTGGGAG
TTAAGAGGGAGGATCCCACAATGGTGCCAGCCAGCACCAGTGTCCACCAGTAGGAGCTCC
AAAGTATGGCTGCTACCAGTATATATGTCCCCAGGGTGCGCTGCACCCATGCCTTTCCTC
TCTGGTACACTAAGCAGCAAGTAGGTCGGGCCAGGCTCCTCTAGAGTTACTGCTTTTTGC
TCTAGGTTCCAGTGCATGTGAGGTTTTGTGTCCACCTTTTAAGAGTGAAGTCTCTATTTC
TTCCAGTTCTTCAGGACATCTGAAATTAGGGATGCCTTCAAAGCCAAATGCTTTAGAGGC
TCATCTTGCTGGTGCTGGGCTGGGGAGCCTGATGTGAGACTCAGAGCTGTCCTGTAGAAG
TAACCTCTGCAGTGTGATTATTCTACACTTTGTGGCTCATCCAACCAGGGGAATGGGACT
TGATTATACTGCGTGTCCACCCCTCCCACTCAACTCATTGCGGTTCCTTCTTTGTCTTTA
GTTGTAGAAGATCTATCCTGGTAGGTTCCAGTCTTTTTCATCAGTGGTTTTCTGCAGAGA
GTTGTGATTTGGGGGTGCCTGCAAGAGGCCATGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTTATTATTACTGATTCAATTTTGGCTGGTCCCAGAAGAGGGTCTGAGAACAGTTTGG
GGCCACAGCCTGTAGGATTGTGAGGTTTTTTGCACTTAGTGTCTGCCCCCTGCCCTCTGG
AGGCTGTCCAGAGGCTGGTGTAGGCTTCCTGGAGGGCAGGGCCTGTGCCTGCCCACTGGG
GAGTAGAGCTGGGTCTTGGCCTGCTGGTGGGTAGTGCCAAGGCTTGGGTGGCTCTGCAAA
GTCTTTAGGCAGTCTCTCTGCTGATGGGTGGGGCTGTGTCCCAGTTCAGTTAGTTGTTTG
GCTTGAGGCATCCCAGCACTGGTGCCTAAAGCAGTTGCGGGGGGAGGCAGGTCTTGGGAG
TTAAGAGGGAGGATCCCACAATGGTGCCAGCCAGCACCAGTGTCCACCAGTAGGAGCTCC
AAAGTATGGCTGCTACCAGTATATATGTCCCCAGGGTGCGCTGCACCCATGCCTTTCCTC
TCTGGTACACTAAGCAGCAAGTAGGTCGGGCCAGGCTCCTCTAGAGTTACTGCTTTTTGC
TCTAGGTTCCAGTGCATGTGAGGTTTTGTGTCCACCTTTTAAGAGTGAAGTCTCTATTTC
TTCCAGTTCTTCAGGACATCTGAAATTAGGGATGCCTTCAAAGCCAAATGCTTTAGAGGC
TCATCTTGCTGGTGCTGGGCTGGGGAGCCTGATGTGAGACTCAGAGCTGTCCTGTAGAAG
TAACCTCTGCAGTGTGATTATTCTACACTTTGTGGCTCATCCAACCAGGGGAATGGGACT
TGATTATACTGCGTGTCCACCCCTCCCACTCAACTCATTGCGGTTCCTTCTTTGTCTTTA
GTTGTAGAAGATCTATCCTGGTAGGTTCCAGTCTTTTTCATCAGTGGTTTTCTGCAGAGA
GTTGTGATTTGGGGGTGCCTGCAAGAGGCCATGAGC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               159-936, gnl|bosTau2|chr3 (26947873-26947099)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               159-936, gnl|bosTau2|chr3 (26947873-26947099)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               spl (0.143184)
               

               
               pla (0.133672)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               pla (0.133672)
               

               
               cty (0.10408)