Ss1.1-Spl1-SPL01F100064.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TACGGCGGCGGAAGCAGCGGCGCTGGGCAGAGGGGTGGGGGACCGAGTGCTAGCGCCTCG GCGGCGGCGGCGGGTCCTGGAGCCCGAGGACGTCGGCTCCGCAGGCGGAGAGCGCACGGG AACCAGCTCGAGGCGGCAAGGCGGCCACTCGGCGCAGCACTCAGGTGGAAATGAGTTCTC AACAGTTTCCTCGGTTAGGAACCCCTTCCACCGGGCTAAGCCAGGCTCCTTCACAGATAG CCAACAGTGGTTCTGCAGGATTGATAAACCCAGCTGCCACAGTCAACGATGAATCTAGTC GCGATGCTGAAGTCACTGCCAGGGAGCACATGGGTTCCAGCAGCTCCCTACAGTCCCGTG AAGAGAAGCAAGAGCCTGTTGTGGTAAGGCCTTATCCACAGGTGCAGATGTTGTCTACAC ACCATGCTGTTGCATCGGGCACACCTGTCACAGTGACAGCCCCACCAGCCCATCTGACGC CAGCAGTGCCACTCTCATTTTCGGAGGGACTTATGAAGCCGCCCCCGAAGCCCACCATGC CTAGCCGTCCCATTGCTCCTGCTCCACCTTCTACCTTGTCACTTCCCCCCAAGGTTCCAG GGCAGGTTACCGTTACCATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCAA CAATCAGTGGACAACAGGGACATCCCAGTAACCTGCATCACATCATGACTACCAACGTAC AGATGTCTATCATCCGCAGCAACGCTCCTGGGCCCCCTCTTCACATTGGAGCTTCTCATT TGCCTCGAGGTGCAGCCGCTGCTGCTGTGATGTCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TACGGCGGCGGAAGCAGCGGCGCTGGGCAGAGGGGTGGGGGACCGAGTGCTAGCGCCTCG GCGGCGGCGGCGGGTCCTGGAGCCCGAGGACGTCGGCTCCGCAGGCGGAGAGCGCACGGG AACCAGCTCGAGGCGGCAAGGCGGCCACTCGGCGCAGCACTCAGGTGGAAATGAGTTCTC AACAGTTTCCTCGGTTAGGAACCCCTTCCACCGGGCTAAGCCAGGCTCCTTCACAGATAG CCAACAGTGGTTCTGCAGGATTGATAAACCCAGCTGCCACAGTCAACGATGAATCTAGTC GCGATGCTGAAGTCACTGCCAGGGAGCACATGGGTTCCAGCAGCTCCCTACAGTCCCGTG AAGAGAAGCAAGAGCCTGTTGTGGTAAGGCCTTATCCACAGGTGCAGATGTTGTCTACAC ACCATGCTGTTGCATCGGGCACACCTGTCACAGTGACAGCCCCACCAGCCCATCTGACGC CAGCAGTGCCACTCTCATTTTCGGAGGGACTTATGAAGCCGCCCCCGAAGCCCACCATGC CTAGCCGTCCCATTGCTCCTGCTCCACCTTCTACCTTGTCACTTCCCCCCAAGGTTCCAG GGCAGGTTACCGTTACCATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCAA CAATCAGTGGACAACAGGGACATCCCAGTAACCTGCATCACATCATGACTACCAACGTAC AGATGTCTATCATCCGCAGCAACGCTCCTGGGCCCCCTCTTCACATTGGAGCTTCTCATT TGCCTCGAGGTGCAGCCGCTGCTGCTGTGATGTCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-109, gnl|bosTau2|chr2 (1740732-1740624) | |
| 1-109, gnl|Hg17|chr2 (128501906-128501799) | |
| 1-109, gnl|Mm7|chr18 (32026417-32026524) | |
| 281-518, gnl|bosTau2|chr2 (1729519-1729282) | |
| 281-518, gnl|canFam2|chr19 (25618378-25618179) | |
| 281-518, gnl|danRer3|chr2 (14771329-14771531) | |
| 281-518, gnl|dasNov1|scaffold_114880 (1175-980) | |
| 281-518, gnl|echTel1|scaffold_254802 (11104-10907) | |
| 281-518, gnl|fr1|chrUn (43389946-43389735) | |
| 281-518, gnl|galGal2|chr9 (933372-933570) | |
| 281-518, gnl|hg17|chr2 (128491451-128491650) | |
| 281-518, gnl|Hg17|chr2 (128491721-128491484) | |
| 281-518, gnl|loxAfr1|scaffold_82136 (4456-4655) | |
| 281-518, gnl|mm7|chr18 (32039384-32039189) | |
| 281-518, gnl|Mm7|chr18 (32039116-32039353) | |
| 281-518, gnl|monDom2|scaffold_24 (42892736-42892533) | |
| 281-518, gnl|oryCun1|scaffold_122788 (17570-17371) | |
| 281-518, gnl|panTro1|chr13 (14618108-14618307) | |
| 281-518, gnl|rheMac2|chr13 (134488974-134489173) | |
| 281-518, gnl|rn3|chr18 (24090792-24090599) | |
| 281-518, gnl|tetNig1|chr1_random (710387-710198) | |
| 676-791, gnl|bosTau2|chr2 (1727203-1727088) | |
| 676-791, gnl|canFam2|chr19 (25620500-25620360) | |
| 676-791, gnl|danRer3|chr2 (14767039-14767127) | |
| 676-791, gnl|dasNov1|scaffold_114880 (3615-3475) | |
| 676-791, gnl|echTel1|scaffold_254802 (13099-12960) | |
| 676-791, gnl|fr1|chrUn (43390566-43390432) | |
| 676-791, gnl|galGal2|chr9 (931703-931838) | |
| 676-791, gnl|hg17|chr2 (128488604-128488744) | |
| 676-791, gnl|Hg17|chr2 (128488720-128488605) | |
| 676-791, gnl|mm7|chr18 (32041738-32041598) | |
| 676-791, gnl|Mm7|chr18 (32041620-32041735) | |
| 676-791, gnl|monDom2|scaffold_24 (42897683-42897543) | |
| 676-791, gnl|oryCun1|scaffold_122788 (19943-19803) | |
| 676-791, gnl|panTro1|chr13 (14615258-14615393) | |
| 676-791, gnl|rheMac2|chr13 (134485796-134485936) | |
| 676-791, gnl|rn3|chr18 (24093323-24093189) | |
| 676-791, gnl|tetNig1|chr1_random (711037-710887) | |
| 676-791, gnl|xenTro1|scaffold_209 (1295808-1295946) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-109, gnl|bosTau2|chr2 (1740732-1740624) | |
| 1-109, gnl|Hg17|chr2 (128501906-128501799) | |
| 1-109, gnl|Mm7|chr18 (32026417-32026524) | |
| 281-518, gnl|bosTau2|chr2 (1729519-1729282) | |
| 281-518, gnl|canFam2|chr19 (25618378-25618179) | |
| 281-518, gnl|danRer3|chr2 (14771329-14771531) | |
| 281-518, gnl|dasNov1|scaffold_114880 (1175-980) | |
| 281-518, gnl|echTel1|scaffold_254802 (11104-10907) | |
| 281-518, gnl|fr1|chrUn (43389946-43389735) | |
| 281-518, gnl|galGal2|chr9 (933372-933570) | |
| 281-518, gnl|hg17|chr2 (128491451-128491650) | |
| 281-518, gnl|Hg17|chr2 (128491721-128491484) | |
| 281-518, gnl|loxAfr1|scaffold_82136 (4456-4655) | |
| 281-518, gnl|mm7|chr18 (32039384-32039189) | |
| 281-518, gnl|Mm7|chr18 (32039116-32039353) | |
| 281-518, gnl|monDom2|scaffold_24 (42892736-42892533) | |
| 281-518, gnl|oryCun1|scaffold_122788 (17570-17371) | |
| 281-518, gnl|panTro1|chr13 (14618108-14618307) | |
| 281-518, gnl|rheMac2|chr13 (134488974-134489173) | |
| 281-518, gnl|rn3|chr18 (24090792-24090599) | |
| 281-518, gnl|tetNig1|chr1_random (710387-710198) | |
| 676-791, gnl|bosTau2|chr2 (1727203-1727088) | |
| 676-791, gnl|canFam2|chr19 (25620500-25620360) | |
| 676-791, gnl|danRer3|chr2 (14767039-14767127) | |
| 676-791, gnl|dasNov1|scaffold_114880 (3615-3475) | |
| 676-791, gnl|echTel1|scaffold_254802 (13099-12960) | |
| 676-791, gnl|fr1|chrUn (43390566-43390432) | |
| 676-791, gnl|galGal2|chr9 (931703-931838) | |
| 676-791, gnl|hg17|chr2 (128488604-128488744) | |
| 676-791, gnl|Hg17|chr2 (128488720-128488605) | |
| 676-791, gnl|mm7|chr18 (32041738-32041598) | |
| 676-791, gnl|Mm7|chr18 (32041620-32041735) | |
| 676-791, gnl|monDom2|scaffold_24 (42897683-42897543) | |
| 676-791, gnl|oryCun1|scaffold_122788 (19943-19803) | |
| 676-791, gnl|panTro1|chr13 (14615258-14615393) | |
| 676-791, gnl|rheMac2|chr13 (134485796-134485936) | |
| 676-791, gnl|rn3|chr18 (24093323-24093189) | |
| 676-791, gnl|tetNig1|chr1_random (711037-710887) | |
| 676-791, gnl|xenTro1|scaffold_209 (1295808-1295946) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.165235) |