Ss1.1-Spl1-SPL01G030088.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTTAACGCCAGTGAGGGAACTGGACACATTTGGCTTGACAGTGTTTCTTGCCATGGACA CGAGTCTGCTCTCTGGCAGTGTAGACACCATGAATGGGGAAAGCATTATTGCAATCATAA TGAAGATGCTGGTGTGACATGTTCTGATGGATCAGATCTGGAACTGAGACTTAAAGGTGG AGGCAGCCACTGTGCTGGGACAGTGGAGGTGGAAATTCAGAAACTGGTAGGAAAAGTGTG TGATAGAAGCTGGGGACTGAAAGAAGCTGATGTGGTTTGCAGGCAGCTGGGATGTGGATC TGCACTCAAAACATCATATCAAGTTTATTCCAAAACCAAGGCAACAAACACATGGCTGTT TGTAAGCAGCTGTAATGGAAATGAAACTTCTCTTTGGGACTGCAAGAATTGGCAGTGGGG TGGACTTAGTTGTGATCACTATGACGAAGCCAAAATTACCTGCTCAGCCCACAGGAAACC CAGGCTGGTTGGAGGGGACATTCCCTGCTCTGGTCGTGTTGAAGTACAACATGGAGACAC GTGGGGCACCGTCTGTGATTCTGACTTCTCTCTGGAGGCGGCCAGCGTGCTGTGCAGGGA ACTACAGTGCGGCACTGTGGTTTCCCTCCTGGGGGGAGCTCACTTTGGAGAAGGAAGTGG ACAGATCTGGGCTGAAGAATTCCAGTGTGAGGGGCACGAGTCCCACCTTTCACTCTGCCC AGTAGCACCCCGCCCTGACGGGACATGTAGCCACAGCAGGGACGTCGGCGTAGTCTGCTC AAGATACACACAAATCCGCTTGGTGAATGGCAAGACCCCATGTGAAGGAAGAGTGGAGCT CAACATTCTTGGGTCCTGGGGGTCCCTCTGCAACTCTCACTGGGACATGGAAGATGCCCA TGTTTTATGCCAGCAGCTTAAATGTGGAGTTGCCCTTTCTATCCCGGGAGGAGCACCTTT TGGGAAAGGAAGTGAGCAGGTCTGGAGGCACATGTTTCACTGCACTGGGACTGAGAAGCA CATGGGAGATTGTTCCGTCACTGCTCTGGGCGCATCACTCTGTTCTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTTAACGCCAGTGAGGGAACTGGACACATTTGGCTTGACAGTGTTTCTTGCCATGGACA CGAGTCTGCTCTCTGGCAGTGTAGACACCATGAATGGGGAAAGCATTATTGCAATCATAA TGAAGATGCTGGTGTGACATGTTCTGATGGATCAGATCTGGAACTGAGACTTAAAGGTGG AGGCAGCCACTGTGCTGGGACAGTGGAGGTGGAAATTCAGAAACTGGTAGGAAAAGTGTG TGATAGAAGCTGGGGACTGAAAGAAGCTGATGTGGTTTGCAGGCAGCTGGGATGTGGATC TGCACTCAAAACATCATATCAAGTTTATTCCAAAACCAAGGCAACAAACACATGGCTGTT TGTAAGCAGCTGTAATGGAAATGAAACTTCTCTTTGGGACTGCAAGAATTGGCAGTGGGG TGGACTTAGTTGTGATCACTATGACGAAGCCAAAATTACCTGCTCAGCCCACAGGAAACC CAGGCTGGTTGGAGGGGACATTCCCTGCTCTGGTCGTGTTGAAGTACAACATGGAGACAC GTGGGGCACCGTCTGTGATTCTGACTTCTCTCTGGAGGCGGCCAGCGTGCTGTGCAGGGA ACTACAGTGCGGCACTGTGGTTTCCCTCCTGGGGGGAGCTCACTTTGGAGAAGGAAGTGG ACAGATCTGGGCTGAAGAATTCCAGTGTGAGGGGCACGAGTCCCACCTTTCACTCTGCCC AGTAGCACCCCGCCCTGACGGGACATGTAGCCACAGCAGGGACGTCGGCGTAGTCTGCTC AAGATACACACAAATCCGCTTGGTGAATGGCAAGACCCCATGTGAAGGAAGAGTGGAGCT CAACATTCTTGGGTCCTGGGGGTCCCTCTGCAACTCTCACTGGGACATGGAAGATGCCCA TGTTTTATGCCAGCAGCTTAAATGTGGAGTTGCCCTTTCTATCCCGGGAGGAGCACCTTT TGGGAAAGGAAGTGAGCAGGTCTGGAGGCACATGTTTCACTGCACTGGGACTGAGAAGCA CATGGGAGATTGTTCCGTCACTGCTCTGGGCGCATCACTCTGTTCTTC |
| Aligned organism(s): 65 entry(ies) | More info |
| Aligned organism(s): 65 entry(ies) | Help | Less info |
| 1-146, gnl|bosTau2|chr1 (31598320-31598175) | |
| 1-146, gnl|canFam2|chr27 (40708439-40708162) | |
| 1-146, gnl|canFam2|chr27 (40708480-40708331) | |
| 1-146, gnl|canFam2|chr28 (35252864-35252729) | |
| 1-146, gnl|canFam2|chr28 (35246600-35246473) | |
| 1-146, gnl|danRer3|chr4 (8193577-8193302) | |
| 1-146, gnl|danRer3|chr4 (8224763-8224633) | |
| 1-146, gnl|danRer3|chr4 (8222948-8222813) | |
| 1-146, gnl|danRer3|chr4 (8246287-8246138) | |
| 1-146, gnl|dasNov1|scaffold_284676 (156-291) | |
| 1-146, gnl|dasNov1|scaffold_4800 (53408-53509) | |
| 1-146, gnl|dasNov1|scaffold_8537 (53217-53493) | |
| 1-146, gnl|dasNov1|scaffold_8537 (53176-53325) | |
| 1-146, gnl|echTel1|scaffold_198348 (2346-2624) | |
| 1-146, gnl|echTel1|scaffold_198348 (2308-2439) | |
| 1-146, gnl|echTel1|scaffold_198348 (2308-2458) | |
| 1-146, gnl|echTel1|scaffold_198348 (2308-2454) | |
| 1-146, gnl|fr1|chrUn (157921904-157921631) | |
| 1-146, gnl|fr1|chrUn (148450544-148450679) | |
| 1-146, gnl|fr1|chrUn (157922970-157922818) | |
| 1-146, gnl|galGal2|chr1 (71875503-71875634) | |
| 1-146, gnl|galGal2|chrUn (3552581-3552307) | |
| 1-146, gnl|galGal2|chrUn (3569225-3569107) | |
| 1-146, gnl|galGal2|chrUn (3574444-3574295) | |
| 1-146, gnl|hg17|chr12 (7540710-7540987) | |
| 1-146, gnl|hg17|chr12 (7450385-7450522) | |
| 1-146, gnl|hg17|chr12 (7476275-7476425) | |
| 1-146, gnl|hg17|chr12 (7439951-7440100) | |
| 1-146, gnl|Hg17|chr12 (7540821-7540676) | |
| 1-146, gnl|loxAfr1|scaffold_16195 (32798-32935) | |
| 1-146, gnl|loxAfr1|scaffold_16195 (23142-23291) | |
| 1-146, gnl|loxAfr1|scaffold_32946 (31108-30958) | |
| 1-146, gnl|loxAfr1|scaffold_81036 (2937-3214) | |
| 1-146, gnl|mm7|chr6 (124293975-124293698) | |
| 1-146, gnl|mm7|chr6 (124291573-124291442) | |
| 1-146, gnl|mm7|chr6 (124291573-124291423) | |
| 1-146, gnl|mm7|chr6 (124294016-124293867) | |
| 1-146, gnl|Mm7|chr6 (124293862-124294007) | |
| 1-146, gnl|monDom2|scaffold_71 (5451921-5452198) | |
| 1-146, gnl|monDom2|scaffold_71 (5455593-5455730) | |
| 1-146, gnl|monDom2|scaffold_71 (5467746-5467894) | |
| 1-146, gnl|monDom2|scaffold_71 (5451881-5452029) | |
| 1-146, gnl|oryCun1|scaffold_191829 (11881-11604) | |
| 1-146, gnl|oryCun1|scaffold_191829 (5514-5377) | |
| 1-146, gnl|oryCun1|scaffold_191829 (11919-11769) | |
| 1-146, gnl|oryCun1|scaffold_191829 (11922-11773) | |
| 1-146, gnl|panTro1|chr10 (8098908-8099185) | |
| 1-146, gnl|panTro1|chr10 (8008803-8008940) | |
| 1-146, gnl|panTro1|chr10 (8034330-8034480) | |
| 1-146, gnl|panTro1|chr10 (7998902-7999051) | |
| 1-146, gnl|rheMac2|chr11 (7796905-7797182) | |
| 1-146, gnl|rheMac2|chr11 (7704283-7704420) | |
| 1-146, gnl|rheMac2|chr11 (7723622-7723772) | |
| 1-146, gnl|rheMac2|chr11 (7693452-7693601) | |
| 1-146, gnl|rn3|chr4 (160646783-160646506) | |
| 1-146, gnl|rn3|chr4 (160644413-160644282) | |
| 1-146, gnl|rn3|chr4 (160646821-160646671) | |
| 1-146, gnl|rn3|chr4 (160646824-160646675) | |
| 1-146, gnl|tetNig1|chrUn_random (101052296-101052573) | |
| 1-146, gnl|tetNig1|chrUn_random (101042745-101042880) | |
| 1-146, gnl|tetNig1|chrUn_random (101040759-101040909) | |
| 1-146, gnl|xenTro1|scaffold_7 (4063174-4062894) | |
| 1-146, gnl|xenTro1|scaffold_7 (4154821-4154702) | |
| 1-146, gnl|xenTro1|scaffold_7 (4097384-4097225) | |
| 1-146, gnl|xenTro1|scaffold_7 (4221236-4221079) |
| Aligned organism(s): 65 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-146, gnl|bosTau2|chr1 (31598320-31598175) | |
| 1-146, gnl|canFam2|chr27 (40708439-40708162) | |
| 1-146, gnl|canFam2|chr27 (40708480-40708331) | |
| 1-146, gnl|canFam2|chr28 (35252864-35252729) | |
| 1-146, gnl|canFam2|chr28 (35246600-35246473) | |
| 1-146, gnl|danRer3|chr4 (8193577-8193302) | |
| 1-146, gnl|danRer3|chr4 (8224763-8224633) | |
| 1-146, gnl|danRer3|chr4 (8222948-8222813) | |
| 1-146, gnl|danRer3|chr4 (8246287-8246138) | |
| 1-146, gnl|dasNov1|scaffold_284676 (156-291) | |
| 1-146, gnl|dasNov1|scaffold_4800 (53408-53509) | |
| 1-146, gnl|dasNov1|scaffold_8537 (53217-53493) | |
| 1-146, gnl|dasNov1|scaffold_8537 (53176-53325) | |
| 1-146, gnl|echTel1|scaffold_198348 (2346-2624) | |
| 1-146, gnl|echTel1|scaffold_198348 (2308-2439) | |
| 1-146, gnl|echTel1|scaffold_198348 (2308-2458) | |
| 1-146, gnl|echTel1|scaffold_198348 (2308-2454) | |
| 1-146, gnl|fr1|chrUn (157921904-157921631) | |
| 1-146, gnl|fr1|chrUn (148450544-148450679) | |
| 1-146, gnl|fr1|chrUn (157922970-157922818) | |
| 1-146, gnl|galGal2|chr1 (71875503-71875634) | |
| 1-146, gnl|galGal2|chrUn (3552581-3552307) | |
| 1-146, gnl|galGal2|chrUn (3569225-3569107) | |
| 1-146, gnl|galGal2|chrUn (3574444-3574295) | |
| 1-146, gnl|hg17|chr12 (7540710-7540987) | |
| 1-146, gnl|hg17|chr12 (7450385-7450522) | |
| 1-146, gnl|hg17|chr12 (7476275-7476425) | |
| 1-146, gnl|hg17|chr12 (7439951-7440100) | |
| 1-146, gnl|Hg17|chr12 (7540821-7540676) | |
| 1-146, gnl|loxAfr1|scaffold_16195 (32798-32935) | |
| 1-146, gnl|loxAfr1|scaffold_16195 (23142-23291) | |
| 1-146, gnl|loxAfr1|scaffold_32946 (31108-30958) | |
| 1-146, gnl|loxAfr1|scaffold_81036 (2937-3214) | |
| 1-146, gnl|mm7|chr6 (124293975-124293698) | |
| 1-146, gnl|mm7|chr6 (124291573-124291442) | |
| 1-146, gnl|mm7|chr6 (124291573-124291423) | |
| 1-146, gnl|mm7|chr6 (124294016-124293867) | |
| 1-146, gnl|Mm7|chr6 (124293862-124294007) | |
| 1-146, gnl|monDom2|scaffold_71 (5451921-5452198) | |
| 1-146, gnl|monDom2|scaffold_71 (5455593-5455730) | |
| 1-146, gnl|monDom2|scaffold_71 (5467746-5467894) | |
| 1-146, gnl|monDom2|scaffold_71 (5451881-5452029) | |
| 1-146, gnl|oryCun1|scaffold_191829 (11881-11604) | |
| 1-146, gnl|oryCun1|scaffold_191829 (5514-5377) | |
| 1-146, gnl|oryCun1|scaffold_191829 (11919-11769) | |
| 1-146, gnl|oryCun1|scaffold_191829 (11922-11773) | |
| 1-146, gnl|panTro1|chr10 (8098908-8099185) | |
| 1-146, gnl|panTro1|chr10 (8008803-8008940) | |
| 1-146, gnl|panTro1|chr10 (8034330-8034480) | |
| 1-146, gnl|panTro1|chr10 (7998902-7999051) | |
| 1-146, gnl|rheMac2|chr11 (7796905-7797182) | |
| 1-146, gnl|rheMac2|chr11 (7704283-7704420) | |
| 1-146, gnl|rheMac2|chr11 (7723622-7723772) | |
| 1-146, gnl|rheMac2|chr11 (7693452-7693601) | |
| 1-146, gnl|rn3|chr4 (160646783-160646506) | |
| 1-146, gnl|rn3|chr4 (160644413-160644282) | |
| 1-146, gnl|rn3|chr4 (160646821-160646671) | |
| 1-146, gnl|rn3|chr4 (160646824-160646675) | |
| 1-146, gnl|tetNig1|chrUn_random (101052296-101052573) | |
| 1-146, gnl|tetNig1|chrUn_random (101042745-101042880) | |
| 1-146, gnl|tetNig1|chrUn_random (101040759-101040909) | |
| 1-146, gnl|xenTro1|scaffold_7 (4063174-4062894) | |
| 1-146, gnl|xenTro1|scaffold_7 (4154821-4154702) | |
| 1-146, gnl|xenTro1|scaffold_7 (4097384-4097225) | |
| 1-146, gnl|xenTro1|scaffold_7 (4221236-4221079) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.120642) | |
| clu (0.119646) |