Ss1.1-Spl1-SPL01G040092.5
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AAAGTTTTTGCGCGTGAGAGCCACGAGAGTTCCGGGTTGAGATTCTCTTTTTAAGACTTC
CAGTTTCCATTTGGACTTGGGCGAAGAGCTTAGAGAAAAGGGGAGAGCTAGAGGCAGTCT
GTTTAACTCAAATATCTGGGAACGGTTTCGTGCATCACGCCCCAGAACTTGCAGTTCCAC
TCAGGGGAACGGACCTGCCCGACAGCTGCCGGAAGTGGGGCTGCGCGGAATGGCTGCCGC
TGCTACCATGGCGGCAGCCGCCCGGGAGCTGGTGTTGCGGTCCGGGGCCTCAGATATGGA
GGAGGAGGAGGGCCCACTGGGGGGTGGTCCAGGTCTCCAGGAGCCACTGCAACTTGGAGA
GTTGGACCTCACCTCTGATGAATTCATCCTGGATGAAGTTGATGTTCACATTCAGGCAAA
TCTGGAGGATGAGTTAGTAAAGGAAGCTCTTAAAACGGGTGTGGATCTCCGTCACTATTC
AAAGCAGGTTGAACTGGAGCTACAGCAGATTGAGCAGAAATCCATTCGTGATTATATCCA
AGAAAGTGAGAACATAGCATCTCTGCACAATCAGATCACAGCCTGCGATGCTGTCCTTGA
GCGCATGGAGCAAATGTTGGGAGCTTTTCAGAGTGACCTCAGCTCCATCAGCTCTGAGAT
CCGGACGCTGCAGGAACAGTCAGGAGCCATGAACATTAGGCTTCGAAACCGCCAGGCTGT
CCGTGGGAAGCTCGGGGAGCTTGTCGATGGTCTGGTGGTGCCCTCTGCTCTGGTCACGGC
AATTCTGGAGGCGCCAGTGACAGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AAAGTTTTTGCGCGTGAGAGCCACGAGAGTTCCGGGTTGAGATTCTCTTTTTAAGACTTC
CAGTTTCCATTTGGACTTGGGCGAAGAGCTTAGAGAAAAGGGGAGAGCTAGAGGCAGTCT
GTTTAACTCAAATATCTGGGAACGGTTTCGTGCATCACGCCCCAGAACTTGCAGTTCCAC
TCAGGGGAACGGACCTGCCCGACAGCTGCCGGAAGTGGGGCTGCGCGGAATGGCTGCCGC
TGCTACCATGGCGGCAGCCGCCCGGGAGCTGGTGTTGCGGTCCGGGGCCTCAGATATGGA
GGAGGAGGAGGGCCCACTGGGGGGTGGTCCAGGTCTCCAGGAGCCACTGCAACTTGGAGA
GTTGGACCTCACCTCTGATGAATTCATCCTGGATGAAGTTGATGTTCACATTCAGGCAAA
TCTGGAGGATGAGTTAGTAAAGGAAGCTCTTAAAACGGGTGTGGATCTCCGTCACTATTC
AAAGCAGGTTGAACTGGAGCTACAGCAGATTGAGCAGAAATCCATTCGTGATTATATCCA
AGAAAGTGAGAACATAGCATCTCTGCACAATCAGATCACAGCCTGCGATGCTGTCCTTGA
GCGCATGGAGCAAATGTTGGGAGCTTTTCAGAGTGACCTCAGCTCCATCAGCTCTGAGAT
CCGGACGCTGCAGGAACAGTCAGGAGCCATGAACATTAGGCTTCGAAACCGCCAGGCTGT
CCGTGGGAAGCTCGGGGAGCTTGTCGATGGTCTGGTGGTGCCCTCTGCTCTGGTCACGGC
AATTCTGGAGGCGCCAGTGACAGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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3-327, gnl|bosTau2|chr23 (5809734-5809414) |
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3-327, gnl|Hg17|chr6 (33347668-33347332) |
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3-327, gnl|Mm7|chr17 (32033877-32034222) |
| |
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600-778, gnl|bosTau2|chr23 (5807317-5807139) |
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600-778, gnl|canFam2|chr12 (5713727-5713942) |
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600-778, gnl|danRer3|chrUn (82676118-82676300) |
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600-778, gnl|dasNov1|scaffold_30296 (3245-3030) |
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600-778, gnl|echTel1|scaffold_203112 (3378-3595) |
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600-778, gnl|fr1|chrUn (71216040-71216227) |
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600-778, gnl|hg17|chr6 (33344739-33344954) |
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600-778, gnl|Hg17|chr6 (33344946-33344768) |
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600-778, gnl|loxAfr1|scaffold_39118 (5024-4809) |
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600-778, gnl|mm7|chr17 (32036839-32036624) |
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600-778, gnl|Mm7|chr17 (32036630-32036808) |
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600-778, gnl|monDom2|scaffold_2029 (1381-1183) |
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600-778, gnl|oryCun1|scaffold_172711 (54939-54724) |
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600-778, gnl|panTro1|chr5 (33789640-33789855) |
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600-778, gnl|rheMac2|chr4 (32984045-32984260) |
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600-778, gnl|rn3|chr20 (5081191-5081406) |
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600-778, gnl|xenTro1|scaffold_726 (417338-417531) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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3-327, gnl|bosTau2|chr23 (5809734-5809414) |
|
3-327, gnl|Hg17|chr6 (33347668-33347332) |
|
3-327, gnl|Mm7|chr17 (32033877-32034222) |
| |
|
600-778, gnl|bosTau2|chr23 (5807317-5807139) |
|
600-778, gnl|canFam2|chr12 (5713727-5713942) |
|
600-778, gnl|danRer3|chrUn (82676118-82676300) |
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600-778, gnl|dasNov1|scaffold_30296 (3245-3030) |
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600-778, gnl|echTel1|scaffold_203112 (3378-3595) |
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600-778, gnl|fr1|chrUn (71216040-71216227) |
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600-778, gnl|hg17|chr6 (33344739-33344954) |
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600-778, gnl|Hg17|chr6 (33344946-33344768) |
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600-778, gnl|loxAfr1|scaffold_39118 (5024-4809) |
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600-778, gnl|mm7|chr17 (32036839-32036624) |
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600-778, gnl|Mm7|chr17 (32036630-32036808) |
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600-778, gnl|monDom2|scaffold_2029 (1381-1183) |
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600-778, gnl|oryCun1|scaffold_172711 (54939-54724) |
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600-778, gnl|panTro1|chr5 (33789640-33789855) |
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600-778, gnl|rheMac2|chr4 (32984045-32984260) |
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600-778, gnl|rn3|chr20 (5081191-5081406) |
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600-778, gnl|xenTro1|scaffold_726 (417338-417531) |
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spl (0.143184) |
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lnt (0.142308) |
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cov (0.132153) |
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eep (0.122564) |
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eru (0.120048) |
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spl (0.143184) |
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lnt (0.142308) |
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cov (0.132153) |
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eep (0.122564) |
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eru (0.120048) |