Ss1.1-Spl1-SPL01H020095.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGTTTCTGTTTACATAGTAGCAGTATTAGAATACATTTCTGCAGACATTTTAAAGCTGG TGGGGAATTATGTGCGAAATATACGGCACTATGAAATTACAAAACAAGATATTAAAGTGG CAATGTGTGCTGATAAGGTATTGATGGATATGTTTCATCAAGATGTAGAAGATATAAATA TATTGTCTTTAACTGATGAAGAGCCTTCCACCTCAGGAGAGCAAACTTATTATGATTTGG TAAAAGCATTTATGGCAGAAATTCGACAATACATAAGGGAACTAAATTTAATTATAAAAG TTTTTAGAGAACCCTTTGTCTCCAACTCAAAATTGTTTTCAGCTAATGTAAGTATAATTG TGTAAATGTATATATCCTTGCATGTGATGGTAATTTTCTATGTCCCCTCAAATTTGAATT TGTATCATTCATGATTGTTTACGATCCATTTTTTTTAAAGTGTAGGATTTAATTCATTGT GACTATGAACATAAAGTAGCTACAACAGTATCAATAAATAAAGCATCAGAAATTAAAAGA AAATTTTAAATGGACCGAATGTATAAGTACAAATGAATTCATAGAATCTTCCATGTACTC CAGAGAATAAAACCTCTTGTGAAAGATTTCTGTGTTTAACTTGACTCACTTGCATCACTG AGCCAGTGCTTTATCAGCACTAACTATTAAGTGCCATAGTTGGCAGTGGGGATGCAAAGA CTAAAAAAACGGTTTCCTATCTCACTTTAGTCTAGTCAAGACAAAAGCCAATCTTGCAAT ACCATGTGGTAATTACCATAATGGAAGTATGGCAACAGTATTTTGGGGAGCACATGGGAA GCAGCCATTAACACTGAAAATTAGAGAAGGGATTACAGATTTTACAGTAGTAATCAAACC AACCTTATTGGGTCCTGGAGAAATGCTAAGTGAGGACAGTTAAGATTTTCTAAGGGAATT GTATTGTAGTAACTTCTAGAACTGTAACTACACAGGTTGATGGCGAAGGGGTGCTCACTG CAGGGGCTGAGATGGGGTCTCAAGTTATGACAGTGAGTGAGCATTATAAAAGAGTAGTGT ATGAGTTGCACAAATCTGTAAAAGTAGTAAAAACTATTGAATTGTTCACTTTAAATGGAT GAATTGTATAGTATGTAAATTATACTGCAATCAAGTTGTTTAAAAACAGAAAAGGGGAGT TCCTGTCGCAGCACAGCGGAAACAAGTCTTGACTAGGAACCATGAGGTTTCAGATTCGAT CCCTGGCCTCAGTCAGTAGGTTAAGAATCCGGTGTTGCTGTGAGCTATGGTATAGGTCGA AGATGCGGCTCGGATCTGCATTGCCGTGGCTGTGGTGTAGGCCAGCGGCTACAGCTCTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGTTTCTGTTTACATAGTAGCAGTATTAGAATACATTTCTGCAGACATTTTAAAGCTGG TGGGGAATTATGTGCGAAATATACGGCACTATGAAATTACAAAACAAGATATTAAAGTGG CAATGTGTGCTGATAAGGTATTGATGGATATGTTTCATCAAGATGTAGAAGATATAAATA TATTGTCTTTAACTGATGAAGAGCCTTCCACCTCAGGAGAGCAAACTTATTATGATTTGG TAAAAGCATTTATGGCAGAAATTCGACAATACATAAGGGAACTAAATTTAATTATAAAAG TTTTTAGAGAACCCTTTGTCTCCAACTCAAAATTGTTTTCAGCTAATGTAAGTATAATTG TGTAAATGTATATATCCTTGCATGTGATGGTAATTTTCTATGTCCCCTCAAATTTGAATT TGTATCATTCATGATTGTTTACGATCCATTTTTTTTAAAGTGTAGGATTTAATTCATTGT GACTATGAACATAAAGTAGCTACAACAGTATCAATAAATAAAGCATCAGAAATTAAAAGA AAATTTTAAATGGACCGAATGTATAAGTACAAATGAATTCATAGAATCTTCCATGTACTC CAGAGAATAAAACCTCTTGTGAAAGATTTCTGTGTTTAACTTGACTCACTTGCATCACTG AGCCAGTGCTTTATCAGCACTAACTATTAAGTGCCATAGTTGGCAGTGGGGATGCAAAGA CTAAAAAAACGGTTTCCTATCTCACTTTAGTCTAGTCAAGACAAAAGCCAATCTTGCAAT ACCATGTGGTAATTACCATAATGGAAGTATGGCAACAGTATTTTGGGGAGCACATGGGAA GCAGCCATTAACACTGAAAATTAGAGAAGGGATTACAGATTTTACAGTAGTAATCAAACC AACCTTATTGGGTCCTGGAGAAATGCTAAGTGAGGACAGTTAAGATTTTCTAAGGGAATT GTATTGTAGTAACTTCTAGAACTGTAACTACACAGGTTGATGGCGAAGGGGTGCTCACTG CAGGGGCTGAGATGGGGTCTCAAGTTATGACAGTGAGTGAGCATTATAAAAGAGTAGTGT ATGAGTTGCACAAATCTGTAAAAGTAGTAAAAACTATTGAATTGTTCACTTTAAATGGAT GAATTGTATAGTATGTAAATTATACTGCAATCAAGTTGTTTAAAAACAGAAAAGGGGAGT TCCTGTCGCAGCACAGCGGAAACAAGTCTTGACTAGGAACCATGAGGTTTCAGATTCGAT CCCTGGCCTCAGTCAGTAGGTTAAGAATCCGGTGTTGCTGTGAGCTATGGTATAGGTCGA AGATGCGGCTCGGATCTGCATTGCCGTGGCTGTGGTGTAGGCCAGCGGCTACAGCTCTGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 3-140, gnl|bosTau2|chr10 (27587733-27587596) | |
| 3-140, gnl|canFam2|chr8 (29701104-29701297) | |
| 3-140, gnl|danRer3|chr13 (39322809-39322992) | |
| 3-140, gnl|dasNov1|scaffold_66052 (4723-4907) | |
| 3-140, gnl|echTel1|scaffold_294515 (36916-36735) | |
| 3-140, gnl|fr1|chrUn (2757843-2757658) | |
| 3-140, gnl|galGal2|chr5 (54437195-54437383) | |
| 3-140, gnl|hg17|chr14 (49736143-49736336) | |
| 3-140, gnl|Hg17|chr14 (49736293-49736156) | |
| 3-140, gnl|loxAfr1|scaffold_44055 (1990-1800) | |
| 3-140, gnl|mm7|chr12 (67589575-67589770) | |
| 3-140, gnl|Mm7|chr12 (67589725-67589588) | |
| 3-140, gnl|monDom2|scaffold_8 (88510112-88509924) | |
| 3-140, gnl|oryCun1|scaffold_88369 (9940-9747) | |
| 3-140, gnl|panTro1|chr15 (49148813-49149006) | |
| 3-140, gnl|rheMac2|chr7 (113259049-113259242) | |
| 3-140, gnl|rn3|chr6 (91682981-91683177) | |
| 3-140, gnl|tetNig1|chr10 (11316682-11316500) | |
| 3-140, gnl|xenTro1|scaffold_666 (689004-689196) | |
| 784-1192, gnl|bosTau2|chr11 (15728297-15728720) | |
| 784-1192, gnl|Hg17|chr2 (39192657-39192236) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-140, gnl|bosTau2|chr10 (27587733-27587596) | |
| 3-140, gnl|canFam2|chr8 (29701104-29701297) | |
| 3-140, gnl|danRer3|chr13 (39322809-39322992) | |
| 3-140, gnl|dasNov1|scaffold_66052 (4723-4907) | |
| 3-140, gnl|echTel1|scaffold_294515 (36916-36735) | |
| 3-140, gnl|fr1|chrUn (2757843-2757658) | |
| 3-140, gnl|galGal2|chr5 (54437195-54437383) | |
| 3-140, gnl|hg17|chr14 (49736143-49736336) | |
| 3-140, gnl|Hg17|chr14 (49736293-49736156) | |
| 3-140, gnl|loxAfr1|scaffold_44055 (1990-1800) | |
| 3-140, gnl|mm7|chr12 (67589575-67589770) | |
| 3-140, gnl|Mm7|chr12 (67589725-67589588) | |
| 3-140, gnl|monDom2|scaffold_8 (88510112-88509924) | |
| 3-140, gnl|oryCun1|scaffold_88369 (9940-9747) | |
| 3-140, gnl|panTro1|chr15 (49148813-49149006) | |
| 3-140, gnl|rheMac2|chr7 (113259049-113259242) | |
| 3-140, gnl|rn3|chr6 (91682981-91683177) | |
| 3-140, gnl|tetNig1|chr10 (11316682-11316500) | |
| 3-140, gnl|xenTro1|scaffold_666 (689004-689196) | |
| 784-1192, gnl|bosTau2|chr11 (15728297-15728720) | |
| 784-1192, gnl|Hg17|chr2 (39192657-39192236) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| kid (0.129735) | |
| sug (0.127291) |