Ss1.1-Spl1-SPL01H050075.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTTGGCCTATTGGACGTGCGAGCGTTAAAACCGAGTCTCCGGAATAGAAGGTGGACGTT TTCCTGAGCGTGTTGGCTGTGAGCGGGTCCCCTGTGGGTTGTAGAATTCCGACTTCATGG CGGAGATAATTCAGGAACGCATAGAGGATCGACTCCCCGAATTGGAACAGCTGGAGCGCA TTGGACTGTTCAGTCGTGCGGAGATTAAGGCTATCATTAAGAAGGCTTCAGATCTAGAAT ACAAAATACAGCGAAGAACTCTTTTTAAGGAAGACTTTATCAATTATGTCCAATATGAAA TTAATCTCTTGGAGCTGATCCAGAGAAGAAGAGCTCGCATTGGGTATTCATTTAAGAAGG ATGAGATTGAGAATTCTATCGTACACCGGGTACAAGGTGTCTTCCGGCGTGCGTCAGCCA AGTGGAAGGATGATGTTCAACTCTGGCTGTCATACGTAGTCTTCTGTAAGAAGTGGGCTA CCAAAGCTCAACTTAGCAAGGTATTCTCTGCCATGTTGGCCATTCATTCAAACAAGCCAG CTCTGTGGATTATGGCGGCCAAATGGGAAATGGAAGATCGCCTGTCTTCAGAAAGTGCAA GACAGCTGTTTCTTCGAGCTCTGCGCTTTCATCCGGAGTGCCCAAAACTTTATCAAGAAT ACTTTAGGATGGAACTGATGCATGCTGAGAAATTGAGGAAAGAAAAGCAAGAATTTGAAA CAGCCAAGATGGATGTGGAGAATCTTGAATATTCCGAAGAAATCCTTAAGGGCGAGTTGG CACGGATCATCTACAAAAATTCTGTAAGCATAATTAAAGGTGCAGAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTTGGCCTATTGGACGTGCGAGCGTTAAAACCGAGTCTCCGGAATAGAAGGTGGACGTT TTCCTGAGCGTGTTGGCTGTGAGCGGGTCCCCTGTGGGTTGTAGAATTCCGACTTCATGG CGGAGATAATTCAGGAACGCATAGAGGATCGACTCCCCGAATTGGAACAGCTGGAGCGCA TTGGACTGTTCAGTCGTGCGGAGATTAAGGCTATCATTAAGAAGGCTTCAGATCTAGAAT ACAAAATACAGCGAAGAACTCTTTTTAAGGAAGACTTTATCAATTATGTCCAATATGAAA TTAATCTCTTGGAGCTGATCCAGAGAAGAAGAGCTCGCATTGGGTATTCATTTAAGAAGG ATGAGATTGAGAATTCTATCGTACACCGGGTACAAGGTGTCTTCCGGCGTGCGTCAGCCA AGTGGAAGGATGATGTTCAACTCTGGCTGTCATACGTAGTCTTCTGTAAGAAGTGGGCTA CCAAAGCTCAACTTAGCAAGGTATTCTCTGCCATGTTGGCCATTCATTCAAACAAGCCAG CTCTGTGGATTATGGCGGCCAAATGGGAAATGGAAGATCGCCTGTCTTCAGAAAGTGCAA GACAGCTGTTTCTTCGAGCTCTGCGCTTTCATCCGGAGTGCCCAAAACTTTATCAAGAAT ACTTTAGGATGGAACTGATGCATGCTGAGAAATTGAGGAAAGAAAAGCAAGAATTTGAAA CAGCCAAGATGGATGTGGAGAATCTTGAATATTCCGAAGAAATCCTTAAGGGCGAGTTGG CACGGATCATCTACAAAAATTCTGTAAGCATAATTAAAGGTGCAGAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 15-209, gnl|bosTau2|chr19 (10291616-10291426) | |
| 15-209, gnl|Hg17|chr17 (27252861-27252667) | |
| 15-209, gnl|Mm7|chr11 (80043959-80043792) | |
| 336-439, gnl|bosTau2|chr19 (10284744-10284641) | |
| 336-439, gnl|Hg17|chr17 (27245869-27245766) | |
| 336-439, gnl|Mm7|chr11 (80040453-80040350) | |
| 538-659, gnl|bosTau2|chr19 (10281423-10281302) | |
| 538-659, gnl|canFam2|chr9 (44398085-44397940) | |
| 538-659, gnl|danRer3|chrUn (34522219-34522344) | |
| 538-659, gnl|dasNov1|scaffold_88670 (4529-4663) | |
| 538-659, gnl|echTel1|scaffold_245496 (7540-7392) | |
| 538-659, gnl|fr1|chrUn (86748455-86748577) | |
| 538-659, gnl|galGal2|chr18 (6377313-6377462) | |
| 538-659, gnl|hg17|chr17 (27240392-27240538) | |
| 538-659, gnl|Hg17|chr17 (27240538-27240417) | |
| 538-659, gnl|loxAfr1|scaffold_69417 (9311-9461) | |
| 538-659, gnl|mm7|chr11 (80037165-80037307) | |
| 538-659, gnl|Mm7|chr11 (80037307-80037186) | |
| 538-659, gnl|oryCun1|scaffold_115003 (2215-2326) | |
| 538-659, gnl|panTro1|chr19 (30680685-30680831) | |
| 538-659, gnl|rheMac2|chr16 (27084217-27084363) | |
| 538-659, gnl|rn3|chr10 (66173383-66173529) | |
| 538-659, gnl|tetNig1|chrUn_random (53743234-53743112) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-209, gnl|bosTau2|chr19 (10291616-10291426) | |
| 15-209, gnl|Hg17|chr17 (27252861-27252667) | |
| 15-209, gnl|Mm7|chr11 (80043959-80043792) | |
| 336-439, gnl|bosTau2|chr19 (10284744-10284641) | |
| 336-439, gnl|Hg17|chr17 (27245869-27245766) | |
| 336-439, gnl|Mm7|chr11 (80040453-80040350) | |
| 538-659, gnl|bosTau2|chr19 (10281423-10281302) | |
| 538-659, gnl|canFam2|chr9 (44398085-44397940) | |
| 538-659, gnl|danRer3|chrUn (34522219-34522344) | |
| 538-659, gnl|dasNov1|scaffold_88670 (4529-4663) | |
| 538-659, gnl|echTel1|scaffold_245496 (7540-7392) | |
| 538-659, gnl|fr1|chrUn (86748455-86748577) | |
| 538-659, gnl|galGal2|chr18 (6377313-6377462) | |
| 538-659, gnl|hg17|chr17 (27240392-27240538) | |
| 538-659, gnl|Hg17|chr17 (27240538-27240417) | |
| 538-659, gnl|loxAfr1|scaffold_69417 (9311-9461) | |
| 538-659, gnl|mm7|chr11 (80037165-80037307) | |
| 538-659, gnl|Mm7|chr11 (80037307-80037186) | |
| 538-659, gnl|oryCun1|scaffold_115003 (2215-2326) | |
| 538-659, gnl|panTro1|chr19 (30680685-30680831) | |
| 538-659, gnl|rheMac2|chr16 (27084217-27084363) | |
| 538-659, gnl|rn3|chr10 (66173383-66173529) | |
| 538-659, gnl|tetNig1|chrUn_random (53743234-53743112) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |