Non-Coding RNA Search

Ss1.1-Spl1-SPL01H060086.5

Sequence:


               
               CAGGACGCCCAGACACCCCCGGGTCTGAGAGATGCGGCCGCTGCTGCTGCTGCTGCCACT
GCTGTGGGCAGGTGAGTGGGCTGCGCGGGGCGGGGCTGCGGCTGATCCGCGTCCCCCCGC
AGGGTCCCTGGCTCAGGACTGGAGCTACCGGCTGGACGTGCAGGAGACCGTGACGGTGCA
GGAGGGCCTGTGTGTCTGCGTGCCCTGCTCCTTCTCCTATCCCGAGAAGGACTGGTTTGC
GCCTGTTCACGGCTACTGGTTCCGCGAAGGGGCCAATACGGACCAGGACCCTCCAGTGAC
CACAAACAACCAAGTTCGTGAAGTGCAGGAGGAGACCCGGGGCCGATTCCACCTCCTTGG
GGATCTTCTGAACAGGAACTGCTCCCTGGGCATCAGAGACGCCAGGAGGAGTGACAATGG
CTCTTACTTTTTTCGGGTGGAAAGAGGAAATACAAAATGGAATTACAAGTCTAAGCAGCT
CTCCGTGCACGTGACAGCCCTGACCCAGGCGCCCTACATCCTCATGCCCGAGACCCTGGA
GTCCGGCCGCCCCAGGCGCCTGACCTGCTCTGTGCCCTGGGCCTGTGAGCGGGGCACGCC
CCCCGTCTTCTCCTGGGCCTCAGCTGCCCTCCCCGCCCTGGGCCCCAGGACCCCCCTCTC
CTCCGTGGTCACCCTGACCCCACGGCCCCAGGACCACGGCACCAGCCTCACCTGTCAGGT
GATGTTCCCCGCAAGTGGCGTGACCGTGGGAAGGACCATCCAGCTCAATGTCACCTGTGC
TCCGCTAAACTCAACGATGGGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGACGCCCAGACACCCCCGGGTCTGAGAGATGCGGCCGCTGCTGCTGCTGCTGCCACT
GCTGTGGGCAGGTGAGTGGGCTGCGCGGGGCGGGGCTGCGGCTGATCCGCGTCCCCCCGC
AGGGTCCCTGGCTCAGGACTGGAGCTACCGGCTGGACGTGCAGGAGACCGTGACGGTGCA
GGAGGGCCTGTGTGTCTGCGTGCCCTGCTCCTTCTCCTATCCCGAGAAGGACTGGTTTGC
GCCTGTTCACGGCTACTGGTTCCGCGAAGGGGCCAATACGGACCAGGACCCTCCAGTGAC
CACAAACAACCAAGTTCGTGAAGTGCAGGAGGAGACCCGGGGCCGATTCCACCTCCTTGG
GGATCTTCTGAACAGGAACTGCTCCCTGGGCATCAGAGACGCCAGGAGGAGTGACAATGG
CTCTTACTTTTTTCGGGTGGAAAGAGGAAATACAAAATGGAATTACAAGTCTAAGCAGCT
CTCCGTGCACGTGACAGCCCTGACCCAGGCGCCCTACATCCTCATGCCCGAGACCCTGGA
GTCCGGCCGCCCCAGGCGCCTGACCTGCTCTGTGCCCTGGGCCTGTGAGCGGGGCACGCC
CCCCGTCTTCTCCTGGGCCTCAGCTGCCCTCCCCGCCCTGGGCCCCAGGACCCCCCTCTC
CTCCGTGGTCACCCTGACCCCACGGCCCCAGGACCACGGCACCAGCCTCACCTGTCAGGT
GATGTTCCCCGCAAGTGGCGTGACCGTGGGAAGGACCATCCAGCTCAATGTCACCTGTGC
TCCGCTAAACTCAACGATGGGTGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|20258596|gb|AAK83654.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|20258596|gb|AAK83654.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-497, gnl|bosTau2|chr18 (52384052-52384572)
               

               
               1-497, gnl|Hg17|chr19 (56362441-56362952)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-497, gnl|bosTau2|chr18 (52384052-52384572)
               

               
               1-497, gnl|Hg17|chr19 (56362441-56362952)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-497, gnl\|bosTau2\|chr18 (52384052-52384572)
	1-497, gnl\|Hg17\|chr19 (56362441-56362952)