Ss1.1-Spl1-SPL01H080033.5.5
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TCAAGTTGGGACTTTGGTATTAGAAGACGCTCAAATACAGCTCAAAGATTAGAACGACTC
CGAAAAGAGAGACAAAACCAGATCAAATGCAAAAATATTCAGTGGAAAGAAAGAAATTCT
AAGCAATCAGCCCAAGAGTTAAAGTCACTGTTTGAAAAAAAGTCGCTCAAAGAGAAACCT
CCAAATTCTGGAAAACAGTCAATATTATCTGTACGCCTGGAGCAGTGCCCTCTGCAGCTG
AATAATCCCTTTAACGAGTATTCCAAATTTGATGGCAAGGGTCATGTAGGCACAACAGCA
ACCAAGAAGATCGATGTCTACCTCCCCCTGCACTCGAGCCAGGACAGACTGCTGCCAATG
ACCGTGGTGACAATGGCCAGCGCCAGAGTGCAGGATCTGATTGGGCTCATCTGTTGGCAG
TACACAAGCGAAGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGCAT
ATTGCTGAGGACGACGGGGAGGTTGACACGGATTTCCCACCGCTGGATTCAAACGAGCCC
ATTCATAAGTTCGGCTTCAGTACTTTGGCCCTGGTTGAAAAGTATTCATCTCCTGGTCTG
ACATCCAAAGAGTCGCTCTTTGTTCGAATAAATGCTGCTCATGGATTCTCCCTTATTCAA
GTGGACAATACGAAGGTCACCATGAAAGAAATCTTGCTAAAGGCAGTGAAGCGAAGAAAA
GGATCCCAGAAAATTTCAGGCCCTCAGTACCGCCTGGAGAAGCAGAGCGAGCCCAATGTC
GCCGTGGACCTGGAGAGCACTTTGGAGAGCCAGAGCGCCTGGGAGTTCTGCCTGGTCCGC
GAGAACAGTTCAAGGGCAGACGGGGTTTTTGAGGAGGATTCGCAAATTGACATAGCTACA
GTACAGGACATGCTGAGCAGCCACCATTACAAGTCATTCAAAGTCAGCATGATCCACAGA
CTCCGATTCACAACCGACGTGCAGTTAGGTATCTCTGGAGACAAAGTAGAGATAGACCCT
GTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAATCGAT
TCTGACCTGCTCTGTGCCTGCGACCTTGCCGAAGAAAAAAGCCCCAGTCACGCGATATTT
AAACTCACGTATCTAAGCAATCACGACTACAAACACCTCTACTTTGAATCCGACGCTGCT
ACCGTCAATGAAATCGTGCTCAAGGTTAACTACATCCTGGAATCACGAGCAAGCACTGCC
CGGGCTGACTATTTTGCTCAAAAACAAAGAAAACTGAACAGACGTACGAGCTTCAGCTTC
CAGAAGGAAAAGAAATCAGGGCAACAGTGACACTGGCCTCCAGCTTCAATCTGTGGCTCT
AGCTCTGAGCCTGCCTGCCAGGACCAGGTGGCCTCGGAGCCCACCCTGTGTCCTGCCGGC
CTCAGGGGAGGCCACTCCCAGGGTCACGAGGACAAGGCTGGTGGGCTTTGGGGGAAGGGG
GGGCACCCCCTAGAATGGAGCTGGGGACATTTCCACGGGACCGAAGCCTGAGTGTCATGG
CTTTGATTAGCAGTGCCCAGGGGCCGGACGACCAGGAGGAGCTGCACGCTGTCCAGCCAT
CCTGACTGCCCGAGGTGCTGCCCGAGGCTGTACATAGCCATGCCCAGACTTTTCCTTGCA
ACTTGATCAAATTTCTTAAACAAAGAACAAAAATGTACATGTCTTTCTTTTTTTTTTTCT
TCTTCCTCTTAATAAACTCTTTATCATGGTTGCTATGATGGACCATTCTTTGGGGCAGAG
GATTGATTATGTTATTCTCTTTAAAATCTGCTCCCATATTGAACAGGCAGATTGGAAAAG
CTATGGCTCGATTTTTCAGAAGAAATGTTTAGGGTTTAGTCAATAGTTTTAACTATGCCA
TTTGTTTAAATGAGTGCATTGCTTTGAGGGTAGCATCTTACTAAAGTCAGGAAGGGGACC
TAAGGATGCATGTGTGTCCAAGGCTGTGCCATTTTCCCCTTCAGAAGCCTTCTCCCGCAA
CCCCCCAAGCTGGTCCCATTTCAGAGATGCAGGACGGCATGTAAATTGCGGGGCACAGGG
ACTCGGGGCTCACGCTGGCTCCCAGCCGGAAGTGGTCTCTCCTGTTTCTTAAGCAAGCCT
AGGTTTCTGCTGACAGCTGGACCCACGTGTGGATTTTCCATGGACCCGGAGGAGTCTGCT
GTGCTGTCTGGGAAGGGCTCGGCTCCCCTTCTCCCTCTCCTCCCGGTGCCTGCCCCCCGG
CCGAGCAGGCTGGCGGCCGCTGCTTTCACTGCATCGGGGAGATGCGAGCAGAGACTGCAG
GTGGGGGTCCAGCTCCCAGAAGATGGGGGTTAAGGGATCGGGTGTGGCTGACACCGTCCC
TCTAGCCACACCAGATGCCTCTGCCATCCCCGCCAGACTCTCCAGGGTCCCTCCCAGGGT
GATGGCCAGGGTTGAGGACCCAAGGTTTCACCAAGGACCTGCATTTCAAAGTTGTAAATT
CGTTGTACAGGAAGCCATGTGGCTGAAACAGCCTCTCAAGGTCAAGGGTCTCTGCCCAGG
GGCTTCCTAACGAATCCCTCTTTCATTCTGATCTTTGTTCAGCCAACAGAAGCACCCTTT
TCTAATGTCTTCCATTCTTATCCACCCCAGAAACAAAACAAAATATTATTTGTAGCTTAC
TCTCTGTATTTGAATTTTTAGCAATTTTATATTTAGATATCTTTGGAAAATGTAAATGAC
TAATTTGGTCATTAAATCTTGTGACATATTCAATATTAAAATATTACAATAAAAGTCATA
AATACCTTCTTT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TCAAGTTGGGACTTTGGTATTAGAAGACGCTCAAATACAGCTCAAAGATTAGAACGACTC
CGAAAAGAGAGACAAAACCAGATCAAATGCAAAAATATTCAGTGGAAAGAAAGAAATTCT
AAGCAATCAGCCCAAGAGTTAAAGTCACTGTTTGAAAAAAAGTCGCTCAAAGAGAAACCT
CCAAATTCTGGAAAACAGTCAATATTATCTGTACGCCTGGAGCAGTGCCCTCTGCAGCTG
AATAATCCCTTTAACGAGTATTCCAAATTTGATGGCAAGGGTCATGTAGGCACAACAGCA
ACCAAGAAGATCGATGTCTACCTCCCCCTGCACTCGAGCCAGGACAGACTGCTGCCAATG
ACCGTGGTGACAATGGCCAGCGCCAGAGTGCAGGATCTGATTGGGCTCATCTGTTGGCAG
TACACAAGCGAAGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGCAT
ATTGCTGAGGACGACGGGGAGGTTGACACGGATTTCCCACCGCTGGATTCAAACGAGCCC
ATTCATAAGTTCGGCTTCAGTACTTTGGCCCTGGTTGAAAAGTATTCATCTCCTGGTCTG
ACATCCAAAGAGTCGCTCTTTGTTCGAATAAATGCTGCTCATGGATTCTCCCTTATTCAA
GTGGACAATACGAAGGTCACCATGAAAGAAATCTTGCTAAAGGCAGTGAAGCGAAGAAAA
GGATCCCAGAAAATTTCAGGCCCTCAGTACCGCCTGGAGAAGCAGAGCGAGCCCAATGTC
GCCGTGGACCTGGAGAGCACTTTGGAGAGCCAGAGCGCCTGGGAGTTCTGCCTGGTCCGC
GAGAACAGTTCAAGGGCAGACGGGGTTTTTGAGGAGGATTCGCAAATTGACATAGCTACA
GTACAGGACATGCTGAGCAGCCACCATTACAAGTCATTCAAAGTCAGCATGATCCACAGA
CTCCGATTCACAACCGACGTGCAGTTAGGTATCTCTGGAGACAAAGTAGAGATAGACCCT
GTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAATCGAT
TCTGACCTGCTCTGTGCCTGCGACCTTGCCGAAGAAAAAAGCCCCAGTCACGCGATATTT
AAACTCACGTATCTAAGCAATCACGACTACAAACACCTCTACTTTGAATCCGACGCTGCT
ACCGTCAATGAAATCGTGCTCAAGGTTAACTACATCCTGGAATCACGAGCAAGCACTGCC
CGGGCTGACTATTTTGCTCAAAAACAAAGAAAACTGAACAGACGTACGAGCTTCAGCTTC
CAGAAGGAAAAGAAATCAGGGCAACAGTGACACTGGCCTCCAGCTTCAATCTGTGGCTCT
AGCTCTGAGCCTGCCTGCCAGGACCAGGTGGCCTCGGAGCCCACCCTGTGTCCTGCCGGC
CTCAGGGGAGGCCACTCCCAGGGTCACGAGGACAAGGCTGGTGGGCTTTGGGGGAAGGGG
GGGCACCCCCTAGAATGGAGCTGGGGACATTTCCACGGGACCGAAGCCTGAGTGTCATGG
CTTTGATTAGCAGTGCCCAGGGGCCGGACGACCAGGAGGAGCTGCACGCTGTCCAGCCAT
CCTGACTGCCCGAGGTGCTGCCCGAGGCTGTACATAGCCATGCCCAGACTTTTCCTTGCA
ACTTGATCAAATTTCTTAAACAAAGAACAAAAATGTACATGTCTTTCTTTTTTTTTTTCT
TCTTCCTCTTAATAAACTCTTTATCATGGTTGCTATGATGGACCATTCTTTGGGGCAGAG
GATTGATTATGTTATTCTCTTTAAAATCTGCTCCCATATTGAACAGGCAGATTGGAAAAG
CTATGGCTCGATTTTTCAGAAGAAATGTTTAGGGTTTAGTCAATAGTTTTAACTATGCCA
TTTGTTTAAATGAGTGCATTGCTTTGAGGGTAGCATCTTACTAAAGTCAGGAAGGGGACC
TAAGGATGCATGTGTGTCCAAGGCTGTGCCATTTTCCCCTTCAGAAGCCTTCTCCCGCAA
CCCCCCAAGCTGGTCCCATTTCAGAGATGCAGGACGGCATGTAAATTGCGGGGCACAGGG
ACTCGGGGCTCACGCTGGCTCCCAGCCGGAAGTGGTCTCTCCTGTTTCTTAAGCAAGCCT
AGGTTTCTGCTGACAGCTGGACCCACGTGTGGATTTTCCATGGACCCGGAGGAGTCTGCT
GTGCTGTCTGGGAAGGGCTCGGCTCCCCTTCTCCCTCTCCTCCCGGTGCCTGCCCCCCGG
CCGAGCAGGCTGGCGGCCGCTGCTTTCACTGCATCGGGGAGATGCGAGCAGAGACTGCAG
GTGGGGGTCCAGCTCCCAGAAGATGGGGGTTAAGGGATCGGGTGTGGCTGACACCGTCCC
TCTAGCCACACCAGATGCCTCTGCCATCCCCGCCAGACTCTCCAGGGTCCCTCCCAGGGT
GATGGCCAGGGTTGAGGACCCAAGGTTTCACCAAGGACCTGCATTTCAAAGTTGTAAATT
CGTTGTACAGGAAGCCATGTGGCTGAAACAGCCTCTCAAGGTCAAGGGTCTCTGCCCAGG
GGCTTCCTAACGAATCCCTCTTTCATTCTGATCTTTGTTCAGCCAACAGAAGCACCCTTT
TCTAATGTCTTCCATTCTTATCCACCCCAGAAACAAAACAAAATATTATTTGTAGCTTAC
TCTCTGTATTTGAATTTTTAGCAATTTTATATTTAGATATCTTTGGAAAATGTAAATGAC
TAATTTGGTCATTAAATCTTGTGACATATTCAATATTAAAATATTACAATAAAAGTCATA
AATACCTTCTTT
|
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gi|57162286|emb|CAI39888.1| |
Protein identifier
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gi|57162286|emb|CAI39888.1| |
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128-280, gnl|bosTau2|chr24 (23954256-23954104) |
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128-280, gnl|canFam2|chr9 (60835485-60835301) |
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128-280, gnl|danRer3|chrNA (115316459-115316302) |
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128-280, gnl|dasNov1|scaffold_9887 (47691-47508) |
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128-280, gnl|echTel1|scaffold_289757 (3746-3929) |
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128-280, gnl|fr1|chrUn (273644188-273644363) |
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128-280, gnl|galGal2|chr17 (741516-741333) |
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128-280, gnl|hg17|chr9 (125499478-125499659) |
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128-280, gnl|Hg17|chr9 (125499635-125499483) |
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128-280, gnl|loxAfr1|scaffold_78364 (4522-4339) |
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128-280, gnl|mm7|chr2 (34451725-34451544) |
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128-280, gnl|Mm7|chr2 (34451566-34451718) |
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128-280, gnl|monDom2|scaffold_38 (20039732-20039914) |
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128-280, gnl|oryCun1|scaffold_182149 (43917-43734) |
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128-280, gnl|panTro1|chr11 (110299859-110300040) |
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128-280, gnl|rheMac2|chr15 (100958573-100958392) |
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128-280, gnl|rn3|chr3 (13373852-13373672) |
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128-280, gnl|tetNig1|chrUn_random (35757219-35757374) |
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128-280, gnl|xenTro1|scaffold_317 (1250809-1250997) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
128-280, gnl|bosTau2|chr24 (23954256-23954104) |
|
128-280, gnl|canFam2|chr9 (60835485-60835301) |
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128-280, gnl|danRer3|chrNA (115316459-115316302) |
|
128-280, gnl|dasNov1|scaffold_9887 (47691-47508) |
|
128-280, gnl|echTel1|scaffold_289757 (3746-3929) |
|
128-280, gnl|fr1|chrUn (273644188-273644363) |
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128-280, gnl|galGal2|chr17 (741516-741333) |
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128-280, gnl|hg17|chr9 (125499478-125499659) |
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128-280, gnl|Hg17|chr9 (125499635-125499483) |
|
128-280, gnl|loxAfr1|scaffold_78364 (4522-4339) |
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128-280, gnl|mm7|chr2 (34451725-34451544) |
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128-280, gnl|Mm7|chr2 (34451566-34451718) |
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128-280, gnl|monDom2|scaffold_38 (20039732-20039914) |
|
128-280, gnl|oryCun1|scaffold_182149 (43917-43734) |
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128-280, gnl|panTro1|chr11 (110299859-110300040) |
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128-280, gnl|rheMac2|chr15 (100958573-100958392) |
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128-280, gnl|rn3|chr3 (13373852-13373672) |
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128-280, gnl|tetNig1|chrUn_random (35757219-35757374) |
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128-280, gnl|xenTro1|scaffold_317 (1250809-1250997) |
|
cbl (0.344392) |
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pty (0.285429) |
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cga (0.279096) |
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fce (0.271592) |
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med (0.232504) |
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cty (0.20816) |
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col (0.195008) |
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nlu (0.191681) |
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eye (0.170503) |
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csp (0.161186) |
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hyp (0.142837) |
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lnt (0.142308) |
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nca (0.136874) |
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spc (0.113366) |
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cbl (0.344392) |
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pty (0.285429) |
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cga (0.279096) |
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fce (0.271592) |
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med (0.232504) |
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cty (0.20816) |
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col (0.195008) |
|
nlu (0.191681) |
|
eye (0.170503) |
|
csp (0.161186) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
spc (0.113366) |
