Ss1.1-Spl1-SPL01H080104.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGAGGCCGTGGTTTCGAGCTCAGTCCGCTGCGGGGAGGAGATGCTGTCTCGACTCAGCG TTAGGTGGTTGCGGCCACTGCCTGCCCTGCCGCTGGGGCCCCTGAGTGTCCGGCTCGCGC CGGTCCCAACGGACAGCGCCAAGCGCTCCGCTTTGCCAGTGTGGGCGGTGGCGCCGGTCT CTGCAGTTGGTCCGGGCGGTGCCGGTGGCTGGTACGAGGCCTTGGCTACGTCGGCTCCGG TGCAAGGCGCCGAGGACGTGCTGCTTAATGTGCACTCTGCCACGGGCCTGCCCTGGTGGG GCAGCATTCTCCTCACCACCGTGGCCCTGCGCGGCGCCATCACGCTGCCCCTGGCCGCCT ACCAGCACTACATCCTAGCCAAGGTGGAAAATTTGCAGCCAGAAATAAAAAACATTTCAA GACATCTTAACCAAGAAGTTGCAGTTCGTGCACATCAGTTGGGATGGTCCAAAAGAGCTG CCAGGCTCACTTATCTGAAGACTATGCGGAAGCTTGTTTCAGAGCTGTATGTTCGGGATA ACTGCCACCCTTTCAAAGCCACTGTGTTGGTGTGGATTCAGCTTCCAATGTGGATCTTCA TGTCTGTCGCTCTCCGGAATTTGAGCACAGGGAAAACACAGTCCGAAGCAGGTTTATCTG TTCAGGAGCAGTTAGCTACTGGAGGGGTCCTATGGTTTTCCGACCTCACTGCCGTGGATT CCACTTGGATTCTGCCCGTCTCTGTTGGTGTCATCAATTTACTGATAGTGGAGATTTTTG CTCTGCAAAAAATTGGTACGTCTCGTTTTCAGACCTATGTTACATACTTTGTTCGTGCGG TATCGGTGCTGATGATTCCAATTGCAGCGACAGTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGAGGCCGTGGTTTCGAGCTCAGTCCGCTGCGGGGAGGAGATGCTGTCTCGACTCAGCG TTAGGTGGTTGCGGCCACTGCCTGCCCTGCCGCTGGGGCCCCTGAGTGTCCGGCTCGCGC CGGTCCCAACGGACAGCGCCAAGCGCTCCGCTTTGCCAGTGTGGGCGGTGGCGCCGGTCT CTGCAGTTGGTCCGGGCGGTGCCGGTGGCTGGTACGAGGCCTTGGCTACGTCGGCTCCGG TGCAAGGCGCCGAGGACGTGCTGCTTAATGTGCACTCTGCCACGGGCCTGCCCTGGTGGG GCAGCATTCTCCTCACCACCGTGGCCCTGCGCGGCGCCATCACGCTGCCCCTGGCCGCCT ACCAGCACTACATCCTAGCCAAGGTGGAAAATTTGCAGCCAGAAATAAAAAACATTTCAA GACATCTTAACCAAGAAGTTGCAGTTCGTGCACATCAGTTGGGATGGTCCAAAAGAGCTG CCAGGCTCACTTATCTGAAGACTATGCGGAAGCTTGTTTCAGAGCTGTATGTTCGGGATA ACTGCCACCCTTTCAAAGCCACTGTGTTGGTGTGGATTCAGCTTCCAATGTGGATCTTCA TGTCTGTCGCTCTCCGGAATTTGAGCACAGGGAAAACACAGTCCGAAGCAGGTTTATCTG TTCAGGAGCAGTTAGCTACTGGAGGGGTCCTATGGTTTTCCGACCTCACTGCCGTGGATT CCACTTGGATTCTGCCCGTCTCTGTTGGTGTCATCAATTTACTGATAGTGGAGATTTTTG CTCTGCAAAAAATTGGTACGTCTCGTTTTCAGACCTATGTTACATACTTTGTTCGTGCGG TATCGGTGCTGATGATTCCAATTGCAGCGACAGTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 2-386, gnl|bosTau2|chr6 (50072581-50072201) | |
| 2-386, gnl|Hg17|chr4 (74300437-74300066) | |
| 2-386, gnl|Mm7|chr5 (90195078-90194728) | |
| 483-648, gnl|bosTau2|chr6 (50068667-50068502) | |
| 483-648, gnl|Hg17|chr4 (74296167-74296002) | |
| 483-648, gnl|Mm7|chr5 (90190640-90190475) | |
| 772-874, gnl|bosTau2|chr6 (50053827-50053725) | |
| 772-874, gnl|canFam2|chr13 (64817923-64818065) | |
| 772-874, gnl|danRer3|chrNA (28237033-28237154) | |
| 772-874, gnl|dasNov1|scaffold_111468 (1782-1639) | |
| 772-874, gnl|echTel1|scaffold_299094 (1687-1551) | |
| 772-874, gnl|hg17|chr4 (74292546-74292689) | |
| 772-874, gnl|Hg17|chr4 (74292674-74292572) | |
| 772-874, gnl|loxAfr1|scaffold_3706 (61862-61719) | |
| 772-874, gnl|mm7|chr5 (90188615-90188753) | |
| 772-874, gnl|Mm7|chr5 (90188741-90188639) | |
| 772-874, gnl|monDom2|scaffold_32 (18232794-18232924) | |
| 772-874, gnl|oryCun1|scaffold_203914 (59848-59697) | |
| 772-874, gnl|panTro1|chr3 (59431955-59431812) | |
| 772-874, gnl|rheMac2|chr5 (56622863-56622720) | |
| 772-874, gnl|rn3|chr14 (19399231-19399093) | |
| 772-874, gnl|tetNig1|chrUn_random (47594979-47595110) | |
| 772-874, gnl|xenTro1|scaffold_716 (516350-516490) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-386, gnl|bosTau2|chr6 (50072581-50072201) | |
| 2-386, gnl|Hg17|chr4 (74300437-74300066) | |
| 2-386, gnl|Mm7|chr5 (90195078-90194728) | |
| 483-648, gnl|bosTau2|chr6 (50068667-50068502) | |
| 483-648, gnl|Hg17|chr4 (74296167-74296002) | |
| 483-648, gnl|Mm7|chr5 (90190640-90190475) | |
| 772-874, gnl|bosTau2|chr6 (50053827-50053725) | |
| 772-874, gnl|canFam2|chr13 (64817923-64818065) | |
| 772-874, gnl|danRer3|chrNA (28237033-28237154) | |
| 772-874, gnl|dasNov1|scaffold_111468 (1782-1639) | |
| 772-874, gnl|echTel1|scaffold_299094 (1687-1551) | |
| 772-874, gnl|hg17|chr4 (74292546-74292689) | |
| 772-874, gnl|Hg17|chr4 (74292674-74292572) | |
| 772-874, gnl|loxAfr1|scaffold_3706 (61862-61719) | |
| 772-874, gnl|mm7|chr5 (90188615-90188753) | |
| 772-874, gnl|Mm7|chr5 (90188741-90188639) | |
| 772-874, gnl|monDom2|scaffold_32 (18232794-18232924) | |
| 772-874, gnl|oryCun1|scaffold_203914 (59848-59697) | |
| 772-874, gnl|panTro1|chr3 (59431955-59431812) | |
| 772-874, gnl|rheMac2|chr5 (56622863-56622720) | |
| 772-874, gnl|rn3|chr14 (19399231-19399093) | |
| 772-874, gnl|tetNig1|chrUn_random (47594979-47595110) | |
| 772-874, gnl|xenTro1|scaffold_716 (516350-516490) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.232504) | |
| thg (0.126791) | |
| jca (0.11396) |