Ss1.1-Spl1-SPL01H090069.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATGGGAACCTACTTGGGCACCTTCGATGATTACTTGGAGTTATTCCTGCAGTTTGGTTA TGTGAGCCTTTTCTCCTGTGTCTACCCACTGGCAGCTGCCTTTGCTGTGCTAAATAATCT CACTGAAGTTAATTCAGATGCCTTAAAAATGTGCAGGGTCTTCAAACGTCCATTCTCAGA ACCTTCAGCTAATATTGGTGTATGGCAGTTGGCTTTTGAAACAATGAGTGTTATATCTGT GGTCACTAATTGTGCTCTGATTGGAATGTCACCGCAAGTGAATGCACTCTTTCCAGATTC AAAAGCAGACCTCATTTTGATTGTCGTAGCAGTGGAGCACGCACTCCTGGCTCTGAAGTT CATCCTTGCATTTGCCATCCCTGATAAGCCACGGCATATCCAGATGAAACTGGCCAGACT GGAATTTGAATCTTTGGAGGCACTCAAGCAGCAGCAGATGAAGCTCGTGGCTGAGAACCT GAAGGAGGAATGGAGGGAAGGTGGGAAGGAGAAGACGCCTTGAGTGCAGCAGAGTGCAGA CCTCCCTCTGCAGGTCCCGCCCCTCCCGGCCCTGCTCCTTCCAGGTTCCCGCCTGAGCCC CACCCGCCACTCCAGCTGCCTGACCACATGCTCCAGAACCACTGCTGCTCCAGCCCCGCA CATGGATGAACCACCAGCTCCCCATGTCACTCCTCACAGTGACTGTCAGCCTATGGTGGC GGGGTGGCAGGTCAAGGCATGTGCCCCGTCACCCAGTTCCCTCACAGGCTCCTCTCTGAA GGGGCTTCCTGCCGCGCTCCAGTGAGAGTCACAGGCACAGTGAGGCAGTGTTTCCAACAC TTGGAACTCGAAATACCTCTTTTCTGGTTCTATTCTGCAATGTTAACAGCTCCTCTATCA ACCAAAACAGTAGTAGCAGAGCTATTAAAGGCCACGAGCATGTCTGACAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATGGGAACCTACTTGGGCACCTTCGATGATTACTTGGAGTTATTCCTGCAGTTTGGTTA TGTGAGCCTTTTCTCCTGTGTCTACCCACTGGCAGCTGCCTTTGCTGTGCTAAATAATCT CACTGAAGTTAATTCAGATGCCTTAAAAATGTGCAGGGTCTTCAAACGTCCATTCTCAGA ACCTTCAGCTAATATTGGTGTATGGCAGTTGGCTTTTGAAACAATGAGTGTTATATCTGT GGTCACTAATTGTGCTCTGATTGGAATGTCACCGCAAGTGAATGCACTCTTTCCAGATTC AAAAGCAGACCTCATTTTGATTGTCGTAGCAGTGGAGCACGCACTCCTGGCTCTGAAGTT CATCCTTGCATTTGCCATCCCTGATAAGCCACGGCATATCCAGATGAAACTGGCCAGACT GGAATTTGAATCTTTGGAGGCACTCAAGCAGCAGCAGATGAAGCTCGTGGCTGAGAACCT GAAGGAGGAATGGAGGGAAGGTGGGAAGGAGAAGACGCCTTGAGTGCAGCAGAGTGCAGA CCTCCCTCTGCAGGTCCCGCCCCTCCCGGCCCTGCTCCTTCCAGGTTCCCGCCTGAGCCC CACCCGCCACTCCAGCTGCCTGACCACATGCTCCAGAACCACTGCTGCTCCAGCCCCGCA CATGGATGAACCACCAGCTCCCCATGTCACTCCTCACAGTGACTGTCAGCCTATGGTGGC GGGGTGGCAGGTCAAGGCATGTGCCCCGTCACCCAGTTCCCTCACAGGCTCCTCTCTGAA GGGGCTTCCTGCCGCGCTCCAGTGAGAGTCACAGGCACAGTGAGGCAGTGTTTCCAACAC TTGGAACTCGAAATACCTCTTTTCTGGTTCTATTCTGCAATGTTAACAGCTCCTCTATCA ACCAAAACAGTAGTAGCAGAGCTATTAAAGGCCACGAGCATGTCTGACAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 16-224, gnl|bosTau2|chr22 (13575067-13575276) | |
| 16-224, gnl|Hg17|chr3 (43571966-43571757) | |
| 16-224, gnl|Mm7|chr9 (121960915-121960706) | |
| 336-454, gnl|bosTau2|chr22 (13687651-13687769) | |
| 336-454, gnl|canFam2|chr23 (5849105-5848945) | |
| 336-454, gnl|dasNov1|scaffold_7039 (131250-131368) | |
| 336-454, gnl|echTel1|scaffold_271325 (2660-2795) | |
| 336-454, gnl|fr1|chrUn (167038354-167038496) | |
| 336-454, gnl|galGal2|chr2 (40084647-40084488) | |
| 336-454, gnl|hg17|chr3 (43449084-43449243) | |
| 336-454, gnl|Hg17|chr3 (43449225-43449107) | |
| 336-454, gnl|loxAfr1|scaffold_17516 (24637-24477) | |
| 336-454, gnl|mm7|chr9 (121909535-121909693) | |
| 336-454, gnl|Mm7|chr9 (121909676-121909558) | |
| 336-454, gnl|monDom2|scaffold_7 (89388190-89388048) | |
| 336-454, gnl|oryCun1|scaffold_209080 (8762-8609) | |
| 336-454, gnl|panTro1|chr2 (44651113-44651272) | |
| 336-454, gnl|rheMac2|chr2 (93155273-93155114) | |
| 336-454, gnl|rn3|chr8 (122023077-122023235) | |
| 336-454, gnl|tetNig1|chrUn_random (128622108-128621966) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-224, gnl|bosTau2|chr22 (13575067-13575276) | |
| 16-224, gnl|Hg17|chr3 (43571966-43571757) | |
| 16-224, gnl|Mm7|chr9 (121960915-121960706) | |
| 336-454, gnl|bosTau2|chr22 (13687651-13687769) | |
| 336-454, gnl|canFam2|chr23 (5849105-5848945) | |
| 336-454, gnl|dasNov1|scaffold_7039 (131250-131368) | |
| 336-454, gnl|echTel1|scaffold_271325 (2660-2795) | |
| 336-454, gnl|fr1|chrUn (167038354-167038496) | |
| 336-454, gnl|galGal2|chr2 (40084647-40084488) | |
| 336-454, gnl|hg17|chr3 (43449084-43449243) | |
| 336-454, gnl|Hg17|chr3 (43449225-43449107) | |
| 336-454, gnl|loxAfr1|scaffold_17516 (24637-24477) | |
| 336-454, gnl|mm7|chr9 (121909535-121909693) | |
| 336-454, gnl|Mm7|chr9 (121909676-121909558) | |
| 336-454, gnl|monDom2|scaffold_7 (89388190-89388048) | |
| 336-454, gnl|oryCun1|scaffold_209080 (8762-8609) | |
| 336-454, gnl|panTro1|chr2 (44651113-44651272) | |
| 336-454, gnl|rheMac2|chr2 (93155273-93155114) | |
| 336-454, gnl|rn3|chr8 (122023077-122023235) | |
| 336-454, gnl|tetNig1|chrUn_random (128622108-128621966) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bla (0.124347) | |
| jej (0.0989218) |