Ss1.1-Tes1-TES01A020053.5.5
|
GCGGCTCGAGGGGACCCGGAGTGGAGCTGAGGCCGTCCGGCAGGCGGTGCACACTTCAGC
TCCCCACTTCCAGGACCTACCCGGCGGCGAGGGGGCCCCTCGCCTCTGACCGTCTGGGAG
GAAATGCCTTTGACCAGCCGCAGGATGGGCAGCGGCCGGAGGAAGGTCAGCTGGGCGCTC
TGCTTCCTGCTGCTGCTCCTGGAAGCCGCTCCGGCCAAGAATATCTCGAAACGGGCACTG
CACGTGAGGCTGGCGGAGAGATCCCGCGCCGAGGAGGCTGGCGGACTCCGGCAGCCCCGC
GCCGACCGCTGCCCCCCGCCCCCGCGCTCGCTGCCCCCCGGCGCCTGCCAGGCGACGCGC
TGCCAGGCCGACTCCGAGTGTCCGCGACATCGGCGCTGCTGCTACAACGGCTGCGCCTAC
GCCTGCCTGGAGGCCGTGCCGCCCCCGCCAGTTTTAGACTGGCTGGTGCAGCCCAAACCT
CGATGGCTCGGGGGCAACGGCTGGCTCCTGGATGGTCCTGAGGAAACGTTGCAAGCAGAG
GCCTGCAGCACCACAGAGGATGGGGCCGAGCCGCTCCTCTGCCCCTCAGGCTACGAGTGC
CACATCCTGAGCCCAGGTGACATGGCTGAGGGCATCCCCAACCGCGGGCAGTGTGTCAAG
CAGCGCCGGCCGGCAGATGGGCGATTCTTACGGCACAAATTTTACAAAGAATATCCAGAG
GGTGCCTCCAAGAATGTGGCCGAACACGGGAAGGGACAGCAGAGGCACTTTCAGTAAAGT
GACATCAGCAGCCCGTCTGCAAGAACACTCCTCCACTTTCTGCTAAGCCTTGGAAACAGT
TGACTAAAAAAATGATTTGACCCCCAAGGTCATGCCCAGCTCAGCAGAGCCTGGCCCCAG
GGATGCTTGGAGACAGGACAACTGCATCCCAACCCCTGTGCGGCCCTACCCGGCGGGGTG
ACTTTGTGGGAGCCATTCACCAGCGCTGGGTTCCCGTTTTATCGTCATAGAAACAAGGCA
CACCTCGCAGTCCTCCTGACCTTGGAGTTCCCCACATCTCCCGTGGGAAGAAGTCACTGC
CTTTGTGAGCCGTGGGGAGCCCCTTTCTCAGACGGAGTTCTTAGAATGTCATTGGTTTGC
ACTCCCCAGATTCCTTCCAGGTTTGGCTCTGGGACGCTTGGTCCCAAAAGTTCTCAAGAT
AAATTGCTTATCATAAAATGGAAATGAATTTAATAAAAAAGGGGGGGCCCTTTTAAATTT
TCCTTGGGGGGGCCAAATTTTCCCCTTCCCCATTTTTTTTGAAAAAGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGCTCGAGGGGACCCGGAGTGGAGCTGAGGCCGTCCGGCAGGCGGTGCACACTTCAGC
TCCCCACTTCCAGGACCTACCCGGCGGCGAGGGGGCCCCTCGCCTCTGACCGTCTGGGAG
GAAATGCCTTTGACCAGCCGCAGGATGGGCAGCGGCCGGAGGAAGGTCAGCTGGGCGCTC
TGCTTCCTGCTGCTGCTCCTGGAAGCCGCTCCGGCCAAGAATATCTCGAAACGGGCACTG
CACGTGAGGCTGGCGGAGAGATCCCGCGCCGAGGAGGCTGGCGGACTCCGGCAGCCCCGC
GCCGACCGCTGCCCCCCGCCCCCGCGCTCGCTGCCCCCCGGCGCCTGCCAGGCGACGCGC
TGCCAGGCCGACTCCGAGTGTCCGCGACATCGGCGCTGCTGCTACAACGGCTGCGCCTAC
GCCTGCCTGGAGGCCGTGCCGCCCCCGCCAGTTTTAGACTGGCTGGTGCAGCCCAAACCT
CGATGGCTCGGGGGCAACGGCTGGCTCCTGGATGGTCCTGAGGAAACGTTGCAAGCAGAG
GCCTGCAGCACCACAGAGGATGGGGCCGAGCCGCTCCTCTGCCCCTCAGGCTACGAGTGC
CACATCCTGAGCCCAGGTGACATGGCTGAGGGCATCCCCAACCGCGGGCAGTGTGTCAAG
CAGCGCCGGCCGGCAGATGGGCGATTCTTACGGCACAAATTTTACAAAGAATATCCAGAG
GGTGCCTCCAAGAATGTGGCCGAACACGGGAAGGGACAGCAGAGGCACTTTCAGTAAAGT
GACATCAGCAGCCCGTCTGCAAGAACACTCCTCCACTTTCTGCTAAGCCTTGGAAACAGT
TGACTAAAAAAATGATTTGACCCCCAAGGTCATGCCCAGCTCAGCAGAGCCTGGCCCCAG
GGATGCTTGGAGACAGGACAACTGCATCCCAACCCCTGTGCGGCCCTACCCGGCGGGGTG
ACTTTGTGGGAGCCATTCACCAGCGCTGGGTTCCCGTTTTATCGTCATAGAAACAAGGCA
CACCTCGCAGTCCTCCTGACCTTGGAGTTCCCCACATCTCCCGTGGGAAGAAGTCACTGC
CTTTGTGAGCCGTGGGGAGCCCCTTTCTCAGACGGAGTTCTTAGAATGTCATTGGTTTGC
ACTCCCCAGATTCCTTCCAGGTTTGGCTCTGGGACGCTTGGTCCCAAAAGTTCTCAAGAT
AAATTGCTTATCATAAAATGGAAATGAATTTAATAAAAAAGGGGGGGCCCTTTTAAATTT
TCCTTGGGGGGGCCAAATTTTCCCCTTCCCCATTTTTTTTGAAAAAGG
|
|
20-266, gnl|bosTau2|chr18 (10637502-10637256) |
|
20-266, gnl|canFam2|chr5 (71095921-71095283) |
|
20-266, gnl|dasNov1|scaffold_267994 (329-955) |
|
20-266, gnl|hg17|chr16 (82885747-82886457) |
|
20-266, gnl|Hg17|chr16 (82885963-82886221) |
|
20-266, gnl|mm7|chr8 (118299121-118299791) |
|
20-266, gnl|Mm7|chr8 (118299311-118299584) |
|
20-266, gnl|panTro1|chr18_random (41441249-41441960) |
|
20-266, gnl|rheMac2|chr20 (82426377-82427085) |
|
20-266, gnl|rn3|chr19 (49929021-49929685) |
| |
|
268-451, gnl|bosTau2|chr18 (10625102-10624919) |
|
268-451, gnl|Hg17|chr16 (82904068-82904260) |
|
268-451, gnl|Mm7|chr8 (118311645-118311834) |
| |
|
534-679, gnl|bosTau2|chr18 (10619355-10619210) |
|
534-679, gnl|Hg17|chr16 (82910536-82910681) |
|
534-679, gnl|Mm7|chr8 (118313407-118313552) |
| |
|
789-1094, gnl|bosTau2|chr18 (10608825-10608522) |
|
789-1094, gnl|Hg17|chr16 (82920426-82920711) |
|
789-1094, gnl|Mm7|chr8 (118319189-118319439) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
20-266, gnl|bosTau2|chr18 (10637502-10637256) |
|
20-266, gnl|canFam2|chr5 (71095921-71095283) |
|
20-266, gnl|dasNov1|scaffold_267994 (329-955) |
|
20-266, gnl|hg17|chr16 (82885747-82886457) |
|
20-266, gnl|Hg17|chr16 (82885963-82886221) |
|
20-266, gnl|mm7|chr8 (118299121-118299791) |
|
20-266, gnl|Mm7|chr8 (118299311-118299584) |
|
20-266, gnl|panTro1|chr18_random (41441249-41441960) |
|
20-266, gnl|rheMac2|chr20 (82426377-82427085) |
|
20-266, gnl|rn3|chr19 (49929021-49929685) |
| |
|
268-451, gnl|bosTau2|chr18 (10625102-10624919) |
|
268-451, gnl|Hg17|chr16 (82904068-82904260) |
|
268-451, gnl|Mm7|chr8 (118311645-118311834) |
| |
|
534-679, gnl|bosTau2|chr18 (10619355-10619210) |
|
534-679, gnl|Hg17|chr16 (82910536-82910681) |
|
534-679, gnl|Mm7|chr8 (118313407-118313552) |
| |
|
789-1094, gnl|bosTau2|chr18 (10608825-10608522) |
|
789-1094, gnl|Hg17|chr16 (82920426-82920711) |
|
789-1094, gnl|Mm7|chr8 (118319189-118319439) |
|
pla (0.534688) |
|
amn (0.417711) |
|
ute (0.398353) |
|
elu (0.385356) |
|
hyp (0.285673) |
|
cga (0.279096) |
|
cov (0.264306) |
|
nep (0.183925) |
|
nco (0.161734) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
sug (0.127291) |
|
eep (0.122564) |
|
med (0.116252) |
|
eje (0.0988338) |
|
pla (0.534688) |
|
amn (0.417711) |
|
ute (0.398353) |
|
elu (0.385356) |
|
hyp (0.285673) |
|
cga (0.279096) |
|
cov (0.264306) |
|
nep (0.183925) |
|
nco (0.161734) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
sug (0.127291) |
|
eep (0.122564) |
|
med (0.116252) |
|
eje (0.0988338) |
