Ss1.1-Tes1-TES01A040018.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGATTTTCAAGGCAACTGCTTGGCAGCTCTGGGACACAGCCAGCGACCGCCCCGTCTGA GTGACCGGTGGCCGGCGGGTTTCCTGGCGGCGGCTCCTGCATGAAAGGCTTGCTGTTTCC TGCCAGAGCTGCCGGGATCCCTCCGCGAGTGTTGCATTTTGCGACTAAGAACAAAACGTC TTCTGTGGAAAGCTGAAAAGAGACGGCTGGGCGGCCCAGGAGACAACCTAGCTTGGTGTC TGGGCCGTTCGTCTTGCTTTGAGGTGGGGATCGCCTGGCGTCTCCTGGCCGAGGATCAGG CGCCTGGAGGAGCAGCCACGCACCGACCTGCAGCTGGCCTGTCCCCGCCGCACCTTCAGG AAATATAAGAAACGGGAGGACATGTTACATCTGGGCAGTTCTTGGAGCGGGCTGGCCCTG ACCATCGGCGTGCTTCTGGGTTCGAAGCCCTCGGCTTACGGCGATTTGTCCGCCTCCCGT CCAAACATCCTTCTTCTGATGGCGGACGATCTGGGCATCGGAGACCTTGGCTGCTATGGC AACCACACCATAAGGACGCCAAACATTGACCGCCTCGCCGCGGACGGCGTGATGCTCACC CAGCACCTCGCGGCAGCTTCACTGTGCACCCCGAGCAGAGCCGCTTTCCTCACGGGCAGA TACCCACTCCGATCAGGTATGGTTTCCAGCACCGGCTCGCGTGTTCTGCAGTGGGTGGCA GCCTCCGGAGGCTTGCCACCAAATGAGACGACATTTGCAAAAATATTGAAGGACAAAGGC TACGTGACTGGACTTGTGGGCAAATGGCATCTGGGTCTCAACTGCGAATCGTCCGAGGAC CACTGCCACCATCCCCTCAACCACGGCTTTGACCTTTTCTACGGGATGCCGTTTTCCATG ATGGGCGACTGTCTGCCCTCGGACATCTCGGAGAAGCGGGTGATCCTGGAGCGCCAGGTC AACGTCTGCTGCCACATCGTGGCCCTGGCCGCCCTCACGCTCGCCCTGGGGAAGCTGACC CGCCTGACACCCGGCTCCTGGACCCCGGTCGTCTGCTCAGCCCTCGCGGCCGCCTTGCTC TTCCTGTGCTCCTGTGTCCTGAGTCCCCTGATCGCGCACGCGGACTGCTTCCTGATGCGA AATCGCACCATCACGGAGCAGCCCATGCGCTTCCACCGAACCACGGCCCTTATGCTCAGA GAGGTCTCCTCCTTCCTCAAAAGAAACAAGCAAGGACCGTTCCTCCTTTTCGTGTCCTTT CTGCACGTCCACAGCCCTCTTATCACCACAGAGCCCTTCCGAGGGAGGAGCCTCCACGGG CGGTACGGGGACAACGTGGAAGAGATGGACTGGATGGTGGGGCAGGTCCTGGATGTTCTG GACACAGAAGGTTTGAGTAACGGTACCCTGGTTTACTTCTCGTCTGATCACGGGGGATCC TTAGAGGCTCACTTTGGAAACCAGCAGTACGGCGGCTGGAACGGGATATACAAAGGTGGC AAAGGCATGGGCGGCTGGGAAGGCGGGATCCGCGTCCCCGGGATATTCCGGTGGCCTGGG GTGCTGCCGGCCGGCCGCGTGATCCAGGAGCCCACCAGCCTGATGGACGTCTTCCCCACC GTGGTCCAGCTGGGCGGCGGCCAGGTGCCGCACGACAGGGTGATTGACGGCCGGGACCTG CTGCCTTTGCTCCTGGGGACCGTTCAGCACTCGGACCACGAGTTCCTGATGCATTACTGC GAGCGCTTTCTGCACGCAGCCCGGTGGCACCAGCGGGACCGAGGGACAGTGTGGAAAGTC CACTTTGTGACCCCAGTGTTCCAGCCAGATGGAGCAGGTGCCTGCTATAACAGAATGGTC TGCCCATGCTTCGGGGACCAGGTCACACACCATGAGCCCCCTCTGCTGTTTGACCTCTCA AGAGACCCTTCTGAGGCCCACCCCCTCACACCAGACACGGAGCCGTTGTTCCATCAGGTC GTGGAGAGGGTCAAAGAGGCCGTGCGGGACCACCAGCAGACACTCAGTCCGGTCCCGCTG CAGCTGGACAGGCTGGACAATGTGTGGAAGCCGTGGCTCCAGCCCTGCTGTGGTCAGTTC CCCCTCTGCTGGTGCGATCGGGAGGCTGACCCCCAATAGCTGCCCGACCCAGAAAGCTGG GTTCCTGATCTTCCCTGCGGTCCAATAAAATGTCACTGTGAAGTGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGATTTTCAAGGCAACTGCTTGGCAGCTCTGGGACACAGCCAGCGACCGCCCCGTCTGA GTGACCGGTGGCCGGCGGGTTTCCTGGCGGCGGCTCCTGCATGAAAGGCTTGCTGTTTCC TGCCAGAGCTGCCGGGATCCCTCCGCGAGTGTTGCATTTTGCGACTAAGAACAAAACGTC TTCTGTGGAAAGCTGAAAAGAGACGGCTGGGCGGCCCAGGAGACAACCTAGCTTGGTGTC TGGGCCGTTCGTCTTGCTTTGAGGTGGGGATCGCCTGGCGTCTCCTGGCCGAGGATCAGG CGCCTGGAGGAGCAGCCACGCACCGACCTGCAGCTGGCCTGTCCCCGCCGCACCTTCAGG AAATATAAGAAACGGGAGGACATGTTACATCTGGGCAGTTCTTGGAGCGGGCTGGCCCTG ACCATCGGCGTGCTTCTGGGTTCGAAGCCCTCGGCTTACGGCGATTTGTCCGCCTCCCGT CCAAACATCCTTCTTCTGATGGCGGACGATCTGGGCATCGGAGACCTTGGCTGCTATGGC AACCACACCATAAGGACGCCAAACATTGACCGCCTCGCCGCGGACGGCGTGATGCTCACC CAGCACCTCGCGGCAGCTTCACTGTGCACCCCGAGCAGAGCCGCTTTCCTCACGGGCAGA TACCCACTCCGATCAGGTATGGTTTCCAGCACCGGCTCGCGTGTTCTGCAGTGGGTGGCA GCCTCCGGAGGCTTGCCACCAAATGAGACGACATTTGCAAAAATATTGAAGGACAAAGGC TACGTGACTGGACTTGTGGGCAAATGGCATCTGGGTCTCAACTGCGAATCGTCCGAGGAC CACTGCCACCATCCCCTCAACCACGGCTTTGACCTTTTCTACGGGATGCCGTTTTCCATG ATGGGCGACTGTCTGCCCTCGGACATCTCGGAGAAGCGGGTGATCCTGGAGCGCCAGGTC AACGTCTGCTGCCACATCGTGGCCCTGGCCGCCCTCACGCTCGCCCTGGGGAAGCTGACC CGCCTGACACCCGGCTCCTGGACCCCGGTCGTCTGCTCAGCCCTCGCGGCCGCCTTGCTC TTCCTGTGCTCCTGTGTCCTGAGTCCCCTGATCGCGCACGCGGACTGCTTCCTGATGCGA AATCGCACCATCACGGAGCAGCCCATGCGCTTCCACCGAACCACGGCCCTTATGCTCAGA GAGGTCTCCTCCTTCCTCAAAAGAAACAAGCAAGGACCGTTCCTCCTTTTCGTGTCCTTT CTGCACGTCCACAGCCCTCTTATCACCACAGAGCCCTTCCGAGGGAGGAGCCTCCACGGG CGGTACGGGGACAACGTGGAAGAGATGGACTGGATGGTGGGGCAGGTCCTGGATGTTCTG GACACAGAAGGTTTGAGTAACGGTACCCTGGTTTACTTCTCGTCTGATCACGGGGGATCC TTAGAGGCTCACTTTGGAAACCAGCAGTACGGCGGCTGGAACGGGATATACAAAGGTGGC AAAGGCATGGGCGGCTGGGAAGGCGGGATCCGCGTCCCCGGGATATTCCGGTGGCCTGGG GTGCTGCCGGCCGGCCGCGTGATCCAGGAGCCCACCAGCCTGATGGACGTCTTCCCCACC GTGGTCCAGCTGGGCGGCGGCCAGGTGCCGCACGACAGGGTGATTGACGGCCGGGACCTG CTGCCTTTGCTCCTGGGGACCGTTCAGCACTCGGACCACGAGTTCCTGATGCATTACTGC GAGCGCTTTCTGCACGCAGCCCGGTGGCACCAGCGGGACCGAGGGACAGTGTGGAAAGTC CACTTTGTGACCCCAGTGTTCCAGCCAGATGGAGCAGGTGCCTGCTATAACAGAATGGTC TGCCCATGCTTCGGGGACCAGGTCACACACCATGAGCCCCCTCTGCTGTTTGACCTCTCA AGAGACCCTTCTGAGGCCCACCCCCTCACACCAGACACGGAGCCGTTGTTCCATCAGGTC GTGGAGAGGGTCAAAGAGGCCGTGCGGGACCACCAGCAGACACTCAGTCCGGTCCCGCTG CAGCTGGACAGGCTGGACAATGTGTGGAAGCCGTGGCTCCAGCCCTGCTGTGGTCAGTTC CCCCTCTGCTGGTGCGATCGGGAGGCTGACCCCCAATAGCTGCCCGACCCAGAAAGCTGG GTTCCTGATCTTCCCTGCGGTCCAATAAAATGTCACTGTGAAGTGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 553-683, gnl|bosTau2|chrX (48471735-48471864) | |
| 553-683, gnl|canFam2|chrX (1506218-1506350) | |
| 553-683, gnl|danRer3|chrNA (45204170-45204302) | |
| 553-683, gnl|dasNov1|scaffold_115986 (463-331) | |
| 553-683, gnl|echTel1|scaffold_131090 (627-752) | |
| 553-683, gnl|fr1|chrUn (253675180-253675048) | |
| 553-683, gnl|galGal2|chr1 (121523492-121523363) | |
| 553-683, gnl|hg17|chrX (2866814-2866946) | |
| 553-683, gnl|Hg17|chrX (2866941-2866812) | |
| 553-683, gnl|loxAfr1|scaffold_88549 (969-837) | |
| 553-683, gnl|monDom2|scaffold_11 (1487801-1487669) | |
| 553-683, gnl|oryCun1|scaffold_54419 (689-817) | |
| 553-683, gnl|panTro1|chrX_random (37463514-37463382) | |
| 553-683, gnl|rheMac2|chrX (586594-586726) | |
| 553-683, gnl|rn3|chr2 (122609624-122609492) | |
| 553-683, gnl|tetNig1|chr2 (12897897-12898026) | |
| 553-683, gnl|xenTro1|scaffold_100 (752223-752094) | |
| 799-1223, gnl|bosTau2|chrX (48475070-48475497) | |
| 799-1223, gnl|Hg17|chrX (2861130-2860706) | |
| 1494-1659, gnl|bosTau2|chrX (48493511-48493676) | |
| 1494-1659, gnl|canFam2|chrX (1586002-1586121) | |
| 1494-1659, gnl|danRer3|chrNA (45190183-45190064) | |
| 1494-1659, gnl|dasNov1|scaffold_51150 (9611-9730) | |
| 1494-1659, gnl|echTel1|scaffold_202790 (4390-4509) | |
| 1494-1659, gnl|fr1|chrUn (132604772-132604653) | |
| 1494-1659, gnl|galGal2|chr1 (121505621-121505740) | |
| 1494-1659, gnl|Hg17|chrX (2821383-2821218) | |
| 1494-1659, gnl|hg17|chrY (12933683-12933802) | |
| 1494-1659, gnl|loxAfr1|scaffold_108711 (5225-5344) | |
| 1494-1659, gnl|monDom2|scaffold_11 (1574512-1574631) | |
| 1494-1659, gnl|oryCun1|scaffold_118779 (3107-2991) | |
| 1494-1659, gnl|panTro1|chrY (13458811-13458930) | |
| 1494-1659, gnl|rheMac2|chrX (734751-734870) | |
| 1494-1659, gnl|rn3|chr2 (122613682-122613797) | |
| 1494-1659, gnl|tetNig1|chr2 (12896290-12896171) | |
| 1494-1659, gnl|xenTro1|scaffold_100 (763854-763973) | |
| 1787-2167, gnl|bosTau2|chrX (48480680-48481060) | |
| 1787-2167, gnl|Hg17|chrX (2846586-2846226) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 553-683, gnl|bosTau2|chrX (48471735-48471864) | |
| 553-683, gnl|canFam2|chrX (1506218-1506350) | |
| 553-683, gnl|danRer3|chrNA (45204170-45204302) | |
| 553-683, gnl|dasNov1|scaffold_115986 (463-331) | |
| 553-683, gnl|echTel1|scaffold_131090 (627-752) | |
| 553-683, gnl|fr1|chrUn (253675180-253675048) | |
| 553-683, gnl|galGal2|chr1 (121523492-121523363) | |
| 553-683, gnl|hg17|chrX (2866814-2866946) | |
| 553-683, gnl|Hg17|chrX (2866941-2866812) | |
| 553-683, gnl|loxAfr1|scaffold_88549 (969-837) | |
| 553-683, gnl|monDom2|scaffold_11 (1487801-1487669) | |
| 553-683, gnl|oryCun1|scaffold_54419 (689-817) | |
| 553-683, gnl|panTro1|chrX_random (37463514-37463382) | |
| 553-683, gnl|rheMac2|chrX (586594-586726) | |
| 553-683, gnl|rn3|chr2 (122609624-122609492) | |
| 553-683, gnl|tetNig1|chr2 (12897897-12898026) | |
| 553-683, gnl|xenTro1|scaffold_100 (752223-752094) | |
| 799-1223, gnl|bosTau2|chrX (48475070-48475497) | |
| 799-1223, gnl|Hg17|chrX (2861130-2860706) | |
| 1494-1659, gnl|bosTau2|chrX (48493511-48493676) | |
| 1494-1659, gnl|canFam2|chrX (1586002-1586121) | |
| 1494-1659, gnl|danRer3|chrNA (45190183-45190064) | |
| 1494-1659, gnl|dasNov1|scaffold_51150 (9611-9730) | |
| 1494-1659, gnl|echTel1|scaffold_202790 (4390-4509) | |
| 1494-1659, gnl|fr1|chrUn (132604772-132604653) | |
| 1494-1659, gnl|galGal2|chr1 (121505621-121505740) | |
| 1494-1659, gnl|Hg17|chrX (2821383-2821218) | |
| 1494-1659, gnl|hg17|chrY (12933683-12933802) | |
| 1494-1659, gnl|loxAfr1|scaffold_108711 (5225-5344) | |
| 1494-1659, gnl|monDom2|scaffold_11 (1574512-1574631) | |
| 1494-1659, gnl|oryCun1|scaffold_118779 (3107-2991) | |
| 1494-1659, gnl|panTro1|chrY (13458811-13458930) | |
| 1494-1659, gnl|rheMac2|chrX (734751-734870) | |
| 1494-1659, gnl|rn3|chr2 (122613682-122613797) | |
| 1494-1659, gnl|tetNig1|chr2 (12896290-12896171) | |
| 1494-1659, gnl|xenTro1|scaffold_100 (763854-763973) | |
| 1787-2167, gnl|bosTau2|chrX (48480680-48481060) | |
| 1787-2167, gnl|Hg17|chrX (2846586-2846226) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) |