Non-Coding RNA Search

Ss1.1-Tes1-TES01A110101.5

Sequence:


               
               TCTTCTTCATTTGCGTATCTCCTCTCTAGAACTGAGACTACTCCTTGGGCTCCTTGAAGT
CATGAAGACTTTTTTGCTAACTTTGGCTGCACTATTGCTCTTGTCCCAGGTTGTTCCAGG
CAGCCCCGAAAAATGCTGGAATCTGCATGGCTCCTGCCGTGACAAATGTTCCAAGAATGA
AAAAGTCTATGTTTTCTGCGTGAGTGGTAAACTGTGCTGTGTGAAGCCCAAGTTCCAGCC
AAATTTATTTCCAAAAGTCAATTAGTGCTTTAAGCATGAAGACACAAAAGCGGAAGATAA
CCCTGCCCTAAGTCTGACCTCAGCAGATTCCTGAGTTTTATTATTAAAACATTTTGGCTG
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTCTTCATTTGCGTATCTCCTCTCTAGAACTGAGACTACTCCTTGGGCTCCTTGAAGT
CATGAAGACTTTTTTGCTAACTTTGGCTGCACTATTGCTCTTGTCCCAGGTTGTTCCAGG
CAGCCCCGAAAAATGCTGGAATCTGCATGGCTCCTGCCGTGACAAATGTTCCAAGAATGA
AAAAGTCTATGTTTTCTGCGTGAGTGGTAAACTGTGCTGTGTGAAGCCCAAGTTCCAGCC
AAATTTATTTCCAAAAGTCAATTAGTGCTTTAAGCATGAAGACACAAAAGCGGAAGATAA
CCCTGCCCTAAGTCTGACCTCAGCAGATTCCTGAGTTTTATTATTAAAACATTTTGGCTG
AAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28628175|gb|AAO13140.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28628175|gb|AAO13140.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               111-361, gnl|bosTau2|chr13 (43165202-43164957)
               

               
               111-361, gnl|Hg17|chr20 (29473151-29472900)
               

               
               111-361, gnl|Mm7|chr2 (152334297-152334049)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               111-361, gnl|bosTau2|chr13 (43165202-43164957)
               

               
               111-361, gnl|Hg17|chr20 (29473151-29472900)
               

               
               111-361, gnl|Mm7|chr2 (152334297-152334049)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	111-361, gnl\|bosTau2\|chr13 (43165202-43164957)
	111-361, gnl\|Hg17\|chr20 (29473151-29472900)
	111-361, gnl\|Mm7\|chr2 (152334297-152334049)