Non-Coding RNA Search

Ss1.1-Tes1-TES01B030104.5

Sequence:


               
               TCTGGCCCGGGCAGACAGCACCAAGAACTGGACAGAGAAAATCCTGAGGCAGACAGAGGT
GCTGCTGCAGCCCAACCCCAGTGCCCGAGTGGAGGAGTTCCTGTATGAGAAGCTGGACAG
GAAGGTGCCCTCACGGGTCACCAACGGGGAGCTGCTGGCTCAGTACATGGCAGAGGCGGC
CAGCGAGCTGGGGCCCACCACTCCTTACGGGAAGACGCTGATCAAGGTGGCAGAAGCGGA
GAAGCGCCTGGGAGCCGCGGAGAGGGACTTTATCCACACGGCCTCCATCAATTTCCTCAC
GCCCCTGCGCAACTTCCTGGAAGGGGACTGGAAGACCATTTCGAAGGAGAGGCGGCTCCT
CCAGAACCGACGTCTGGACTTGGATGCCTGCAAGGCGCGGCTGAAGAAGGCCAAGGCCGC
GGAAGCCAAAGCCACGACGGTGCCTGACTTTCAGGAGACTAGACCGCGTAATTACATTCT
CTCGGCCAGCGCCTCGGCGCTCTGGAACGACGAGGTGGACAAGGCCGAGCAGGAGCTCCG
AGTGGCCCAGACAGAGTTTGACCGGCAGGCCGAAGTGACCCGTCTCCTGCTGGAGGGCAT
CAGTAGCACTCACGTGAACCACCTTCGCTGCCTCCACGAGTTCGTCGAGTCTCAGACAAC
TTACTATGCCCAGTGCTACCGCCACATGCTGGACCTACAGAAGCAGCTGGGCAGATTTCC
AGGCACCTTCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGGCCCGGGCAGACAGCACCAAGAACTGGACAGAGAAAATCCTGAGGCAGACAGAGGT
GCTGCTGCAGCCCAACCCCAGTGCCCGAGTGGAGGAGTTCCTGTATGAGAAGCTGGACAG
GAAGGTGCCCTCACGGGTCACCAACGGGGAGCTGCTGGCTCAGTACATGGCAGAGGCGGC
CAGCGAGCTGGGGCCCACCACTCCTTACGGGAAGACGCTGATCAAGGTGGCAGAAGCGGA
GAAGCGCCTGGGAGCCGCGGAGAGGGACTTTATCCACACGGCCTCCATCAATTTCCTCAC
GCCCCTGCGCAACTTCCTGGAAGGGGACTGGAAGACCATTTCGAAGGAGAGGCGGCTCCT
CCAGAACCGACGTCTGGACTTGGATGCCTGCAAGGCGCGGCTGAAGAAGGCCAAGGCCGC
GGAAGCCAAAGCCACGACGGTGCCTGACTTTCAGGAGACTAGACCGCGTAATTACATTCT
CTCGGCCAGCGCCTCGGCGCTCTGGAACGACGAGGTGGACAAGGCCGAGCAGGAGCTCCG
AGTGGCCCAGACAGAGTTTGACCGGCAGGCCGAAGTGACCCGTCTCCTGCTGGAGGGCAT
CAGTAGCACTCACGTGAACCACCTTCGCTGCCTCCACGAGTTCGTCGAGTCTCAGACAAC
TTACTATGCCCAGTGCTACCGCCACATGCTGGACCTACAGAAGCAGCTGGGCAGATTTCC
AGGCACCTTCGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|22137336|gb|AAH28859.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|22137336|gb|AAH28859.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               64-217, gnl|bosTau2|chr11 (78821059-78820906)
               

               
               64-217, gnl|Hg17|chr9 (128863070-128862916)
               

               
               64-217, gnl|Mm7|chr2 (30362310-30362156)
               


               
               611-714, gnl|bosTau2|chr11 (78812115-78812012)
               

               
               611-714, gnl|Hg17|chr9 (128851707-128851604)
               

               
               611-714, gnl|Mm7|chr2 (30353767-30353664)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               64-217, gnl|bosTau2|chr11 (78821059-78820906)
               

               
               64-217, gnl|Hg17|chr9 (128863070-128862916)
               

               
               64-217, gnl|Mm7|chr2 (30362310-30362156)
               


               
               611-714, gnl|bosTau2|chr11 (78812115-78812012)
               

               
               611-714, gnl|Hg17|chr9 (128851707-128851604)
               

               
               611-714, gnl|Mm7|chr2 (30353767-30353664)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	64-217, gnl\|bosTau2\|chr11 (78821059-78820906)
	64-217, gnl\|Hg17\|chr9 (128863070-128862916)
	64-217, gnl\|Mm7\|chr2 (30362310-30362156)

	611-714, gnl\|bosTau2\|chr11 (78812115-78812012)
	611-714, gnl\|Hg17\|chr9 (128851707-128851604)
	611-714, gnl\|Mm7\|chr2 (30353767-30353664)