Ss1.1-Tes1-TES01C020069.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCTTTCGTGTTACCTTTGCCACAGCTAACGAATCCTCGGCATTGTTAATTAGGATGTTT AATGAAAAAGGAACTTTGAAGGACCTGATCTACAAGGCAAAACCAAAAGACCCATTCCTA AGGAAGTACTGTAACCCTAAGAAGATTCAAGGCCTTGAACTCCAGCAAATAAAAACATAT GGGCGGCAAATATTAGAGGTACTAAAGTTTCTCCATGACAAAGGGTTCCCTTATGGGCAT CTTCATGCCTCCAATGTGGTGCTAGAAGGAGACACTTGCCGGCTGCTAGACCTTGAGAAT TCCTTGTTGGGCCTCCCTTCCTTCTACCGATCCTATTTCTCACAATTCAGGAAAATCAAT ACACTGGAGAGTGTGGACGTCTTCTGCTTCGGCCACTTACTGTATGAAATGACTTACGGA CGACCGCCAGACTCGGTGCCTGTAGACTCCTTCCCGCCTGCACCGTCTATGGCTGTGGTG GCCGTGTTGGAGTCTACGCTGTCTTGTGAAGCCTGTAAAAATGGCATGCCTACCGTCTCC CGGCTCTTACAGATGCCATTATTCAGTGATGTTCTGCTAACCACTTCTGAAAAGCCACAG TTTAAGATCCCCACAAAGTTAAAAGAGGCATTGAGAATTGCCAAAGAGTGTATAGAAAAG AGACTAATCGAAGAACAGAAACAGATCCACCAGCACCGGAGACTGACAAGAGCTCAGTCT CACCACGGATCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCTTTCGTGTTACCTTTGCCACAGCTAACGAATCCTCGGCATTGTTAATTAGGATGTTT AATGAAAAAGGAACTTTGAAGGACCTGATCTACAAGGCAAAACCAAAAGACCCATTCCTA AGGAAGTACTGTAACCCTAAGAAGATTCAAGGCCTTGAACTCCAGCAAATAAAAACATAT GGGCGGCAAATATTAGAGGTACTAAAGTTTCTCCATGACAAAGGGTTCCCTTATGGGCAT CTTCATGCCTCCAATGTGGTGCTAGAAGGAGACACTTGCCGGCTGCTAGACCTTGAGAAT TCCTTGTTGGGCCTCCCTTCCTTCTACCGATCCTATTTCTCACAATTCAGGAAAATCAAT ACACTGGAGAGTGTGGACGTCTTCTGCTTCGGCCACTTACTGTATGAAATGACTTACGGA CGACCGCCAGACTCGGTGCCTGTAGACTCCTTCCCGCCTGCACCGTCTATGGCTGTGGTG GCCGTGTTGGAGTCTACGCTGTCTTGTGAAGCCTGTAAAAATGGCATGCCTACCGTCTCC CGGCTCTTACAGATGCCATTATTCAGTGATGTTCTGCTAACCACTTCTGAAAAGCCACAG TTTAAGATCCCCACAAAGTTAAAAGAGGCATTGAGAATTGCCAAAGAGTGTATAGAAAAG AGACTAATCGAAGAACAGAAACAGATCCACCAGCACCGGAGACTGACAAGAGCTCAGTCT CACCACGGATCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 197-360, gnl|bosTau2|chr22 (32033116-32033279) | |
| 197-360, gnl|canFam2|chr20 (35214811-35214641) | |
| 197-360, gnl|danRer3|chr22 (8896926-8897096) | |
| 197-360, gnl|dasNov1|scaffold_24278 (3884-4054) | |
| 197-360, gnl|echTel1|scaffold_312877 (8606-8436) | |
| 197-360, gnl|fr1|chrUn (236350629-236350799) | |
| 197-360, gnl|galGal2|chr12 (11783712-11783882) | |
| 197-360, gnl|hg17|chr3 (58357804-58357974) | |
| 197-360, gnl|Hg17|chr3 (58357804-58357967) | |
| 197-360, gnl|loxAfr1|scaffold_17104 (8057-7887) | |
| 197-360, gnl|mm7|chr14 (5954542-5954712) | |
| 197-360, gnl|Mm7|chr14 (5954542-5954705) | |
| 197-360, gnl|monDom2|scaffold_5 (3244692-3244861) | |
| 197-360, gnl|oryCun1|scaffold_199783 (76690-76520) | |
| 197-360, gnl|panTro1|chr2 (60108658-60108828) | |
| 197-360, gnl|rheMac2|chr2 (77977533-77977363) | |
| 197-360, gnl|rn3|chr15 (18769916-18769746) | |
| 197-360, gnl|tetNig1|chrUn_random (11934030-11933861) | |
| 197-360, gnl|xenTro1|scaffold_80 (2363266-2363436) | |
| 361-478, gnl|bosTau2|chr22 (32033674-32033791) | |
| 361-478, gnl|canFam2|chr20 (35214057-35213911) | |
| 361-478, gnl|danRer3|chr22 (8898979-8899127) | |
| 361-478, gnl|dasNov1|scaffold_24278 (4461-4608) | |
| 361-478, gnl|echTel1|scaffold_312877 (8131-7983) | |
| 361-478, gnl|fr1|chrUn (236350850-236350991) | |
| 361-478, gnl|galGal2|chr12 (11784689-11784826) | |
| 361-478, gnl|hg17|chr3 (58358349-58358496) | |
| 361-478, gnl|Hg17|chr3 (58358372-58358489) | |
| 361-478, gnl|mm7|chr14 (5955039-5955186) | |
| 361-478, gnl|Mm7|chr14 (5955062-5955179) | |
| 361-478, gnl|monDom2|scaffold_5 (3244935-3245067) | |
| 361-478, gnl|oryCun1|scaffold_199783 (76137-75992) | |
| 361-478, gnl|panTro1|chr2 (60109203-60109350) | |
| 361-478, gnl|rheMac2|chr2 (77976990-77976843) | |
| 361-478, gnl|rn3|chr15 (18769425-18769278) | |
| 361-478, gnl|tetNig1|chrUn_random (11933635-11933506) | |
| 361-478, gnl|xenTro1|scaffold_80 (2364779-2364919) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 197-360, gnl|bosTau2|chr22 (32033116-32033279) | |
| 197-360, gnl|canFam2|chr20 (35214811-35214641) | |
| 197-360, gnl|danRer3|chr22 (8896926-8897096) | |
| 197-360, gnl|dasNov1|scaffold_24278 (3884-4054) | |
| 197-360, gnl|echTel1|scaffold_312877 (8606-8436) | |
| 197-360, gnl|fr1|chrUn (236350629-236350799) | |
| 197-360, gnl|galGal2|chr12 (11783712-11783882) | |
| 197-360, gnl|hg17|chr3 (58357804-58357974) | |
| 197-360, gnl|Hg17|chr3 (58357804-58357967) | |
| 197-360, gnl|loxAfr1|scaffold_17104 (8057-7887) | |
| 197-360, gnl|mm7|chr14 (5954542-5954712) | |
| 197-360, gnl|Mm7|chr14 (5954542-5954705) | |
| 197-360, gnl|monDom2|scaffold_5 (3244692-3244861) | |
| 197-360, gnl|oryCun1|scaffold_199783 (76690-76520) | |
| 197-360, gnl|panTro1|chr2 (60108658-60108828) | |
| 197-360, gnl|rheMac2|chr2 (77977533-77977363) | |
| 197-360, gnl|rn3|chr15 (18769916-18769746) | |
| 197-360, gnl|tetNig1|chrUn_random (11934030-11933861) | |
| 197-360, gnl|xenTro1|scaffold_80 (2363266-2363436) | |
| 361-478, gnl|bosTau2|chr22 (32033674-32033791) | |
| 361-478, gnl|canFam2|chr20 (35214057-35213911) | |
| 361-478, gnl|danRer3|chr22 (8898979-8899127) | |
| 361-478, gnl|dasNov1|scaffold_24278 (4461-4608) | |
| 361-478, gnl|echTel1|scaffold_312877 (8131-7983) | |
| 361-478, gnl|fr1|chrUn (236350850-236350991) | |
| 361-478, gnl|galGal2|chr12 (11784689-11784826) | |
| 361-478, gnl|hg17|chr3 (58358349-58358496) | |
| 361-478, gnl|Hg17|chr3 (58358372-58358489) | |
| 361-478, gnl|mm7|chr14 (5955039-5955186) | |
| 361-478, gnl|Mm7|chr14 (5955062-5955179) | |
| 361-478, gnl|monDom2|scaffold_5 (3244935-3245067) | |
| 361-478, gnl|oryCun1|scaffold_199783 (76137-75992) | |
| 361-478, gnl|panTro1|chr2 (60109203-60109350) | |
| 361-478, gnl|rheMac2|chr2 (77976990-77976843) | |
| 361-478, gnl|rn3|chr15 (18769425-18769278) | |
| 361-478, gnl|tetNig1|chrUn_random (11933635-11933506) | |
| 361-478, gnl|xenTro1|scaffold_80 (2364779-2364919) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.114797) |