Ss1.1-Tes1-TES01C030001.5
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CGGGGGCGCCGGCGTGTACCCACGGAGTGTTTCTGTACCCACGGAGTGTTTCTGTACCCA
CAGAGCTTTCCTGCGAGCGTAGCCTCGGCTCCCATCGGGCGCAGCCGACGGATGATGGGG
CGTCTGGGTGTCCGGCGCGGCCTGGAGTGGTTGCTGGGCTTCTACTTCCTCTCCCACATC
CCCCTCACCCTGCTCGTGGATATGCAGGCATTGCTGCCGCCCGATCTCTACCCCGTCGAG
CTGAGAAACCTGTGCAAGTGGTATACCCAGGAGTTCAAAGACACTCTGCTCCAGAGCCCC
CCAGCGTGGTTTAAGGCCTTCCTGTTTTGCGAGCTTGTGTTTCAGCTGCCTTTCTTTCCC
TTTGCAACATATGCCTTTTTCAAAGGAGGCTGCAAGTGGATCCGCACCCCTGCAATCATC
TACTCAGTTCACACCATGACTACTCTGATTCCAATCGTCTCTACATTTCTGTTCGAGGAT
TTCTCCAAAGCCAGTTGTTTCAAAGGACAAGGACCTACGACTTTCCACGAACGACTACTC
CTTCTGTCCGTTTACATCCCCTACTTTCTCATCCCTCTCATGCTTCTGCTTTTCATGTTG
CGGAACCCCTACTACAAGTCTGAGGAGAAAAGAAAGAAAAAATGAGAGAAATAACCATGG
GCCCAGTGGAAAAGTGCCCAGAGGGCGGTTTCCTGTTGGACCCAGTACCAGAAAACCTGT
TCAGAACCCATGTTTTCAGTAGTATTTGAAACACACCAGCAGCAACACACATGAGCAGGA
CACTGGCGGGGGGGCACATCAAACCTTCACCTTCCAAGGGCGCTGGCACAGACTCATCAC
CTGAGGATGGGCAGAGGGCTGTGGGCTAGGGTATAGGGAAGTGCCAAAGCCCTCACCGTG
TCCCTGCGCTCCACTGCAGGAATACTAAAAGCAGGAGAGACCAGAAACTAGATAAACTTC
CAAGAAACATATTTGGCATCTTTGGCGTGTTCATGAGTCATGCGACCCACAGTACACGTG
TGACTAATCCTTTGACTCATAATTTGTCTCAGCACAGCACTGATCAGCAAAATGAATAGT
GGGACACCGCGGGCCATTTGTAGGTTTGAAATTATGGCTCCGTAATATTCACTAAAAACT
TCCTTGCCCCCAGCCCTAGGTGGGGGGAGATATCCTATAAGCGGTTGAAACTTAGCTTTC
CTTAAAGTTCATACCTGGCATGACTTTCAGAAGTGGGTCAAGCTGGAAGCTGTATTGTTT
CTCTCTTAAACAGGTCGTCCCAGAAGAAGTTCTTGTAGTCTCCTAGTTTCTTCTCTTTCC
ATACCTTATTCTATTACTTTTTACAGACCACCGAACATTAAGTTCCTTTATTTCTGGTGT
CTCAGACCTGAGCTGGAGTTGTGCCTCGTACGGGGTAACTTGAGCTCACCTCATAGTTGA
GTAGTTCCTTCCCGTCTTGTTCTCGAAGGGGATGGGGACGACGGCTGGGCATGGCAGGTG
CAGCGCGTCCACACAGGTTCTCCTCACATGCCAGGACTGGGCATTCTGGTAGCTTGCTTT
ATGCTCGAGGCCAACTTAAAAGACTTGTGAACACACATGGGTAATGGTACACACTGGTCC
TGGTGAGCTCCCCCTTTTTGCCTGTTTTGCTGACAAACCCTAATGGTCTGATTGTTGGGA
GTATTGTCTGATTTGTGTGTCTGGTCCAAATAAAAGTAGGTGCTGACCAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGGGGGCGCCGGCGTGTACCCACGGAGTGTTTCTGTACCCACGGAGTGTTTCTGTACCCA
CAGAGCTTTCCTGCGAGCGTAGCCTCGGCTCCCATCGGGCGCAGCCGACGGATGATGGGG
CGTCTGGGTGTCCGGCGCGGCCTGGAGTGGTTGCTGGGCTTCTACTTCCTCTCCCACATC
CCCCTCACCCTGCTCGTGGATATGCAGGCATTGCTGCCGCCCGATCTCTACCCCGTCGAG
CTGAGAAACCTGTGCAAGTGGTATACCCAGGAGTTCAAAGACACTCTGCTCCAGAGCCCC
CCAGCGTGGTTTAAGGCCTTCCTGTTTTGCGAGCTTGTGTTTCAGCTGCCTTTCTTTCCC
TTTGCAACATATGCCTTTTTCAAAGGAGGCTGCAAGTGGATCCGCACCCCTGCAATCATC
TACTCAGTTCACACCATGACTACTCTGATTCCAATCGTCTCTACATTTCTGTTCGAGGAT
TTCTCCAAAGCCAGTTGTTTCAAAGGACAAGGACCTACGACTTTCCACGAACGACTACTC
CTTCTGTCCGTTTACATCCCCTACTTTCTCATCCCTCTCATGCTTCTGCTTTTCATGTTG
CGGAACCCCTACTACAAGTCTGAGGAGAAAAGAAAGAAAAAATGAGAGAAATAACCATGG
GCCCAGTGGAAAAGTGCCCAGAGGGCGGTTTCCTGTTGGACCCAGTACCAGAAAACCTGT
TCAGAACCCATGTTTTCAGTAGTATTTGAAACACACCAGCAGCAACACACATGAGCAGGA
CACTGGCGGGGGGGCACATCAAACCTTCACCTTCCAAGGGCGCTGGCACAGACTCATCAC
CTGAGGATGGGCAGAGGGCTGTGGGCTAGGGTATAGGGAAGTGCCAAAGCCCTCACCGTG
TCCCTGCGCTCCACTGCAGGAATACTAAAAGCAGGAGAGACCAGAAACTAGATAAACTTC
CAAGAAACATATTTGGCATCTTTGGCGTGTTCATGAGTCATGCGACCCACAGTACACGTG
TGACTAATCCTTTGACTCATAATTTGTCTCAGCACAGCACTGATCAGCAAAATGAATAGT
GGGACACCGCGGGCCATTTGTAGGTTTGAAATTATGGCTCCGTAATATTCACTAAAAACT
TCCTTGCCCCCAGCCCTAGGTGGGGGGAGATATCCTATAAGCGGTTGAAACTTAGCTTTC
CTTAAAGTTCATACCTGGCATGACTTTCAGAAGTGGGTCAAGCTGGAAGCTGTATTGTTT
CTCTCTTAAACAGGTCGTCCCAGAAGAAGTTCTTGTAGTCTCCTAGTTTCTTCTCTTTCC
ATACCTTATTCTATTACTTTTTACAGACCACCGAACATTAAGTTCCTTTATTTCTGGTGT
CTCAGACCTGAGCTGGAGTTGTGCCTCGTACGGGGTAACTTGAGCTCACCTCATAGTTGA
GTAGTTCCTTCCCGTCTTGTTCTCGAAGGGGATGGGGACGACGGCTGGGCATGGCAGGTG
CAGCGCGTCCACACAGGTTCTCCTCACATGCCAGGACTGGGCATTCTGGTAGCTTGCTTT
ATGCTCGAGGCCAACTTAAAAGACTTGTGAACACACATGGGTAATGGTACACACTGGTCC
TGGTGAGCTCCCCCTTTTTGCCTGTTTTGCTGACAAACCCTAATGGTCTGATTGTTGGGA
GTATTGTCTGATTTGTGTGTCTGGTCCAAATAAAAGTAGGTGCTGACCAAAAAAAAAAAA |
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52-245, gnl|bosTau2|chr19 (13349855-13350048) |
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52-245, gnl|canFam2|chr9 (45898263-45898404) |
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52-245, gnl|Hg17|chr17 (23670346-23670523) |
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52-245, gnl|hg17|chr21 (44027367-44027491) |
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52-245, gnl|loxAfr1|scaffold_37929 (2341-2481) |
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52-245, gnl|Mm7|chr11 (78632294-78632098) |
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52-245, gnl|mm7|chr16 (21881517-21881667) |
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52-245, gnl|panTro1|chr22 (44149438-44149562) |
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52-245, gnl|rheMac2|chr3 (2930801-2930704) |
| |
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384-1073, gnl|bosTau2|chr19 (13356541-13357233) |
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384-1073, gnl|Hg17|chr17 (23677685-23678693) |
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384-1073, gnl|Mm7|chr11 (78624373-78623798) |
| |
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1104-1727, gnl|bosTau2|chr19 (13357235-13357858) |
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1104-1727, gnl|Hg17|chr17 (23678706-23679376) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
52-245, gnl|bosTau2|chr19 (13349855-13350048) |
|
52-245, gnl|canFam2|chr9 (45898263-45898404) |
|
52-245, gnl|Hg17|chr17 (23670346-23670523) |
|
52-245, gnl|hg17|chr21 (44027367-44027491) |
|
52-245, gnl|loxAfr1|scaffold_37929 (2341-2481) |
|
52-245, gnl|Mm7|chr11 (78632294-78632098) |
|
52-245, gnl|mm7|chr16 (21881517-21881667) |
|
52-245, gnl|panTro1|chr22 (44149438-44149562) |
|
52-245, gnl|rheMac2|chr3 (2930801-2930704) |
| |
|
384-1073, gnl|bosTau2|chr19 (13356541-13357233) |
|
384-1073, gnl|Hg17|chr17 (23677685-23678693) |
|
384-1073, gnl|Mm7|chr11 (78624373-78623798) |
| |
|
1104-1727, gnl|bosTau2|chr19 (13357235-13357858) |
|
1104-1727, gnl|Hg17|chr17 (23678706-23679376) |
|
cli (0.764059) |
|
pan (0.471921) |
|
hlv (0.417769) |
|
pla (0.401016) |
|
cov (0.396458) |
|
fce (0.271592) |
|
cly (0.241284) |
|
nms (0.213858) |
|
mas (0.210305) |
|
tes (0.207814) |
|
fli (0.202881) |
|
nlu (0.191681) |
|
cmu (0.186393) |
|
sag (0.182715) |
|
sin (0.174948) |
|
eli (0.151814) |
|
fat (0.147427) |
|
cst (0.140036) |
|
che (0.136314) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
ova (0.129132) |
|
bla (0.124347) |
|
eru (0.120048) |
|
cty (0.10408) |
|
cli (0.764059) |
|
pan (0.471921) |
|
hlv (0.417769) |
|
pla (0.401016) |
|
cov (0.396458) |
|
fce (0.271592) |
|
cly (0.241284) |
|
nms (0.213858) |
|
mas (0.210305) |
|
tes (0.207814) |
|
fli (0.202881) |
|
nlu (0.191681) |
|
cmu (0.186393) |
|
sag (0.182715) |
|
sin (0.174948) |
|
eli (0.151814) |
|
fat (0.147427) |
|
cst (0.140036) |
|
che (0.136314) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
ova (0.129132) |
|
bla (0.124347) |
|
eru (0.120048) |
|
cty (0.10408) |
