Non-Coding RNA Search

Ss1.1-Tes1-TES01C030107.5

Sequence:


               
               AGGGTGTCTTCGTGGGAGGTGACGGGCGCAGGTCCGCGCTGGCCGGGCGCACGCCCCACC
GCCACGGCGGCCCTTCTCTGTTTGGCACACGTTGCTCCTTCTGTTTGGGGACCGAGGCTG
CAGCATTGGAACAAAACAGCATTATTTCACGTTTTCTTTTTCTTTTTGTTCGTTCGTTCA
TTTAAACGTATATTTAGAACTGCACTTTGTCAGAAACCTTCCCTTCTCTTTTTATCGCCC
AGCTAACTGAGGTTTTTATTTTCAGATACTGCAGACTGATTTCTAGAGCATTCACTCCAA
AGTGCTGAGTGTTTAGAAACCCCTCTGGTGCTTGGTTGAACAAGGGAATCACACGAAAAC
GAAAATGCAAAAACTGAACTTCGGGGGGTAGTTCTGTGCCTTCCAGCATCTTGTACAGCA
AACCCTGACTCGTCTTTTTACCCCCAAACTACATTTCCCGTAGCGATCGAATCTGCCACT
ATCAAAATGGGTTCCTTGCAGTTATTCCAAATAATCTCGTTTACTCTCAGCTGTATGCGA
ATCGTGTAAGGTTTCTTATGCCCCAGCTTGAAAAATGACTTCCCGGTAGACAGGCGGCTG
CCCATCCTGAAATGGTGGTATTTATTTACATAGAAAGATCTCACCAGAGCTCGTTGCCTG
ACTCCGTTCTGACACCGCGGCAGCTGCTGGGAGGCGGAGGTTGCCGGGGCCCGGCGGCCG
CGCAAGGTGGTGACATGCTTGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGTGTCTTCGTGGGAGGTGACGGGCGCAGGTCCGCGCTGGCCGGGCGCACGCCCCACC
GCCACGGCGGCCCTTCTCTGTTTGGCACACGTTGCTCCTTCTGTTTGGGGACCGAGGCTG
CAGCATTGGAACAAAACAGCATTATTTCACGTTTTCTTTTTCTTTTTGTTCGTTCGTTCA
TTTAAACGTATATTTAGAACTGCACTTTGTCAGAAACCTTCCCTTCTCTTTTTATCGCCC
AGCTAACTGAGGTTTTTATTTTCAGATACTGCAGACTGATTTCTAGAGCATTCACTCCAA
AGTGCTGAGTGTTTAGAAACCCCTCTGGTGCTTGGTTGAACAAGGGAATCACACGAAAAC
GAAAATGCAAAAACTGAACTTCGGGGGGTAGTTCTGTGCCTTCCAGCATCTTGTACAGCA
AACCCTGACTCGTCTTTTTACCCCCAAACTACATTTCCCGTAGCGATCGAATCTGCCACT
ATCAAAATGGGTTCCTTGCAGTTATTCCAAATAATCTCGTTTACTCTCAGCTGTATGCGA
ATCGTGTAAGGTTTCTTATGCCCCAGCTTGAAAAATGACTTCCCGGTAGACAGGCGGCTG
CCCATCCTGAAATGGTGGTATTTATTTACATAGAAAGATCTCACCAGAGCTCGTTGCCTG
ACTCCGTTCTGACACCGCGGCAGCTGCTGGGAGGCGGAGGTTGCCGGGGCCCGGCGGCCG
CGCAAGGTGGTGACATGCTTGGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-711, gnl|bosTau2|chr16 (36623000-36622298)
               

               
               2-711, gnl|Hg17|chr1 (2271135-2271863)
               

               
               2-711, gnl|Mm7|chr4 (154146124-154145400)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-711, gnl|bosTau2|chr16 (36623000-36622298)
               

               
               2-711, gnl|Hg17|chr1 (2271135-2271863)
               

               
               2-711, gnl|Mm7|chr4 (154146124-154145400)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pla (0.267344)
               

               
               cag (0.151194)
               

               
               spl (0.143184)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)
               

               
               cag (0.151194)
               

               
               spl (0.143184)

	2-711, gnl\|bosTau2\|chr16 (36623000-36622298)
	2-711, gnl\|Hg17\|chr1 (2271135-2271863)
	2-711, gnl\|Mm7\|chr4 (154146124-154145400)