Ss1.1-Tes1-TES01C040028.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGATTTTGGTCTGATGCAAGGCTCCTTGAGATAGTGCCCACTTCATTATGAACCAAGGAT GACCGTGCTTACAGGGTTGGGGTCTCACTGGTTCTGATTCACTGTCCTCCTGGACTACTG GCTCTCTCTCCTTTACAAGCGCCTCATCGGCCCCAAAGTCTTGGCCGTGCATGTGGCTGG GCTCCAACGGAAGCCACGGCCAGGCCGAGTGATCCGGGACAAACTAAGGATTTATGCTCA CTGCACAAACCACCACAACCACAACTATGTTCGAGGGTCCATTACACTTTTTATCATCAA CTTGCACCGATCAAGAAAGAAAATCAAGCTGGCAGGGACTCTCAGGGACAAGCTCGTGCA CCAGTACCTGCTGCAGCCATATGGACAGGAGGGCCTCAAGTCCAAGTCAGTGCAGCTGAA TGGCCAGCCCTTAACGATGGTGGACGATGGGACCCTCCCAGACCTGAAGCCCCGCCCTCT GCGGGCCGGCCGGACATTGGTCATCCCTCCCGTCACCATGGGCTTTTATGTGGTCAAGAA TGTCAACGCTTTGGCCTGCCGCTACCGATAAACCCCCTCACACGCACAGGTCACCAGCGA GCCTGCTGGACTGCTTTCCACTCTTCTACCCTAATGGTGTCAGTATTTTTCAGACCTCTC CTGAGCAACAAACCTGTCTCTGCTGCCCCATCCTGCTGGAGTCAACGTTGACTTGCTCCC CAAAGAGACAGCTATCCTAGCGTGAGCTTAGCCTAGGTAGATCACATCCACCCCAAAGGA AAGTGTAGACACCACCTGTACCTATGTAAGCACGAAGGTTTGCTTGTAGAGCTGCATGCA CCCTTCACCGCACCGTACACTCCCAGGACAGGGGAAACAACCCACTGTGATCCCGGTCAC ATGGCACAGCAGTAACTACAGGCCTTAGTGTGCGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGATTTTGGTCTGATGCAAGGCTCCTTGAGATAGTGCCCACTTCATTATGAACCAAGGAT GACCGTGCTTACAGGGTTGGGGTCTCACTGGTTCTGATTCACTGTCCTCCTGGACTACTG GCTCTCTCTCCTTTACAAGCGCCTCATCGGCCCCAAAGTCTTGGCCGTGCATGTGGCTGG GCTCCAACGGAAGCCACGGCCAGGCCGAGTGATCCGGGACAAACTAAGGATTTATGCTCA CTGCACAAACCACCACAACCACAACTATGTTCGAGGGTCCATTACACTTTTTATCATCAA CTTGCACCGATCAAGAAAGAAAATCAAGCTGGCAGGGACTCTCAGGGACAAGCTCGTGCA CCAGTACCTGCTGCAGCCATATGGACAGGAGGGCCTCAAGTCCAAGTCAGTGCAGCTGAA TGGCCAGCCCTTAACGATGGTGGACGATGGGACCCTCCCAGACCTGAAGCCCCGCCCTCT GCGGGCCGGCCGGACATTGGTCATCCCTCCCGTCACCATGGGCTTTTATGTGGTCAAGAA TGTCAACGCTTTGGCCTGCCGCTACCGATAAACCCCCTCACACGCACAGGTCACCAGCGA GCCTGCTGGACTGCTTTCCACTCTTCTACCCTAATGGTGTCAGTATTTTTCAGACCTCTC CTGAGCAACAAACCTGTCTCTGCTGCCCCATCCTGCTGGAGTCAACGTTGACTTGCTCCC CAAAGAGACAGCTATCCTAGCGTGAGCTTAGCCTAGGTAGATCACATCCACCCCAAAGGA AAGTGTAGACACCACCTGTACCTATGTAAGCACGAAGGTTTGCTTGTAGAGCTGCATGCA CCCTTCACCGCACCGTACACTCCCAGGACAGGGGAAACAACCCACTGTGATCCCGGTCAC ATGGCACAGCAGTAACTACAGGCCTTAGTGTGCGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 84-258, gnl|bosTau2|chr26 (9405968-9405792) | |
| 84-258, gnl|canFam2|chr28 (14610771-14610947) | |
| 84-258, gnl|danRer3|chr13 (41918454-41918294) | |
| 84-258, gnl|echTel1|scaffold_311640 (112293-112117) | |
| 84-258, gnl|fr1|chrUn (118024033-118024195) | |
| 84-258, gnl|galGal2|chr6 (21406470-21406293) | |
| 84-258, gnl|hg17|chr10 (100239777-100239953) | |
| 84-258, gnl|Hg17|chr10 (100239976-100239798) | |
| 84-258, gnl|loxAfr1|scaffold_61692 (8236-8412) | |
| 84-258, gnl|mm7|chr19 (42706732-42706908) | |
| 84-258, gnl|Mm7|chr19 (42706929-42706753) | |
| 84-258, gnl|monDom2|scaffold_14 (23693382-23693206) | |
| 84-258, gnl|panTro1|chr8 (101978009-101978185) | |
| 84-258, gnl|rheMac2|chr9 (98080086-98080262) | |
| 84-258, gnl|rn3|chr1 (248191059-248190883) | |
| 84-258, gnl|tetNig1|chr17 (5137642-5137799) | |
| 84-258, gnl|xenTro1|scaffold_51 (2718384-2718538) | |
| 406-845, gnl|bosTau2|chr26 (9378523-9378083) | |
| 406-845, gnl|Hg17|chr10 (100209486-100209054) | |
| 406-845, gnl|Mm7|chr19 (42682985-42682591) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 84-258, gnl|bosTau2|chr26 (9405968-9405792) | |
| 84-258, gnl|canFam2|chr28 (14610771-14610947) | |
| 84-258, gnl|danRer3|chr13 (41918454-41918294) | |
| 84-258, gnl|echTel1|scaffold_311640 (112293-112117) | |
| 84-258, gnl|fr1|chrUn (118024033-118024195) | |
| 84-258, gnl|galGal2|chr6 (21406470-21406293) | |
| 84-258, gnl|hg17|chr10 (100239777-100239953) | |
| 84-258, gnl|Hg17|chr10 (100239976-100239798) | |
| 84-258, gnl|loxAfr1|scaffold_61692 (8236-8412) | |
| 84-258, gnl|mm7|chr19 (42706732-42706908) | |
| 84-258, gnl|Mm7|chr19 (42706929-42706753) | |
| 84-258, gnl|monDom2|scaffold_14 (23693382-23693206) | |
| 84-258, gnl|panTro1|chr8 (101978009-101978185) | |
| 84-258, gnl|rheMac2|chr9 (98080086-98080262) | |
| 84-258, gnl|rn3|chr1 (248191059-248190883) | |
| 84-258, gnl|tetNig1|chr17 (5137642-5137799) | |
| 84-258, gnl|xenTro1|scaffold_51 (2718384-2718538) | |
| 406-845, gnl|bosTau2|chr26 (9378523-9378083) | |
| 406-845, gnl|Hg17|chr10 (100209486-100209054) | |
| 406-845, gnl|Mm7|chr19 (42682985-42682591) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| ute (0.132784) |