Ss1.1-Tes1-TES01C110052.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACACCCTACCCGCGATTCCGCAGCCTCGCGCAGCTCTCGTCGCAATGGACCCGGCTCTG GCCGCGCAGATAACCGAGGCGGTAGCGGAGAAGATGCTCCAGTACCGGCAAGACAAGTCA GGCTGGAAGATTTGCCGGGAAGGCAATGGAGTTTCAGTTTCCTGGAGGCCATCTGTGGAG TTTCCAGGGAACCTGTACCGAGGAGAAGGCATTGTGAATGGGACTCTAGAGCAGGTGTGG GACTGCATAAAGCCACTTGCTGGGACCCTACGAGATAAGTGGGATGAGAATGTGGCCGGT TTTGAAATTATCGAAAGCATCACTGATACACTGTGTGTCAGCAGAACCACCACCCCGTCA GCCGCCATGAAGCTCATTTCTCCCCGGGACTTTGTGGACCTGGTGCTGGTCAGGAAGTAT GAGGACGGGACCATCAGTTCCAATGCTACCAATGTGGAGCATCCGTTATGTCCCCCGAAG CCAGGTTATGTGAGGGGATTTAACCATCCTTGTGGCTGCTTCTGTGCACCTTTGCCCGGG GAGCCCGGCAAGACCAGCCTGGTCACATTCTTCCAGACCGACCTCAGCGGTTACCTCCCA CAGGGCGTGGTGGACTCCTTCTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACACCCTACCCGCGATTCCGCAGCCTCGCGCAGCTCTCGTCGCAATGGACCCGGCTCTG GCCGCGCAGATAACCGAGGCGGTAGCGGAGAAGATGCTCCAGTACCGGCAAGACAAGTCA GGCTGGAAGATTTGCCGGGAAGGCAATGGAGTTTCAGTTTCCTGGAGGCCATCTGTGGAG TTTCCAGGGAACCTGTACCGAGGAGAAGGCATTGTGAATGGGACTCTAGAGCAGGTGTGG GACTGCATAAAGCCACTTGCTGGGACCCTACGAGATAAGTGGGATGAGAATGTGGCCGGT TTTGAAATTATCGAAAGCATCACTGATACACTGTGTGTCAGCAGAACCACCACCCCGTCA GCCGCCATGAAGCTCATTTCTCCCCGGGACTTTGTGGACCTGGTGCTGGTCAGGAAGTAT GAGGACGGGACCATCAGTTCCAATGCTACCAATGTGGAGCATCCGTTATGTCCCCCGAAG CCAGGTTATGTGAGGGGATTTAACCATCCTTGTGGCTGCTTCTGTGCACCTTTGCCCGGG GAGCCCGGCAAGACCAGCCTGGTCACATTCTTCCAGACCGACCTCAGCGGTTACCTCCCA CAGGGCGTGGTGGACTCCTTCTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 1-144, gnl|bosTau2|chr21 (19918530-19918387) | |
| 1-144, gnl|canFam2|chr3 (59325157-59324977) | |
| 1-144, gnl|echTel1|scaffold_324403 (3338-3147) | |
| 1-144, gnl|galGal2|chr10 (12687058-12686880) | |
| 1-144, gnl|hg17|chr15 (79403337-79403521) | |
| 1-144, gnl|Hg17|chr15 (79403540-79403397) | |
| 1-144, gnl|loxAfr1|scaffold_9377 (37009-37194) | |
| 1-144, gnl|mm7|chr7 (79553781-79553609) | |
| 1-144, gnl|Mm7|chr7 (79553593-79553719) | |
| 1-144, gnl|monDom2|scaffold_45 (5492385-5492206) | |
| 1-144, gnl|oryCun1|scaffold_177684 (85209-85369) | |
| 1-144, gnl|panTro1|chr16 (80132289-80132473) | |
| 1-144, gnl|rheMac2|chr7 (60477825-60478009) | |
| 1-144, gnl|rn3|chr1 (139974885-139974713) | |
| 195-327, gnl|bosTau2|chr21 (19917402-19917270) | |
| 195-327, gnl|Hg17|chr15 (79401936-79401804) | |
| 195-327, gnl|Mm7|chr7 (79554710-79554842) | |
| 338-445, gnl|bosTau2|chr21 (19914293-19914186) | |
| 338-445, gnl|canFam2|chr3 (59331168-59331025) | |
| 338-445, gnl|danRer3|chrUn (57456630-57456490) | |
| 338-445, gnl|echTel1|scaffold_322787 (649-789) | |
| 338-445, gnl|galGal2|chr10 (12688471-12688331) | |
| 338-445, gnl|hg17|chr15 (79398723-79398870) | |
| 338-445, gnl|Hg17|chr15 (79398842-79398735) | |
| 338-445, gnl|loxAfr1|scaffold_9377 (28961-29104) | |
| 338-445, gnl|mm7|chr7 (79558458-79558315) | |
| 338-445, gnl|Mm7|chr7 (79558341-79558448) | |
| 338-445, gnl|monDom2|scaffold_45 (5503828-5503682) | |
| 338-445, gnl|oryCun1|scaffold_177684 (80494-80636) | |
| 338-445, gnl|panTro1|chr16 (80127912-80128059) | |
| 338-445, gnl|rheMac2|chr7 (60473597-60473744) | |
| 338-445, gnl|rn3|chr1 (139979562-139979419) | |
| 338-445, gnl|tetNig1|chrUn_random (32726883-32726996) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-144, gnl|bosTau2|chr21 (19918530-19918387) | |
| 1-144, gnl|canFam2|chr3 (59325157-59324977) | |
| 1-144, gnl|echTel1|scaffold_324403 (3338-3147) | |
| 1-144, gnl|galGal2|chr10 (12687058-12686880) | |
| 1-144, gnl|hg17|chr15 (79403337-79403521) | |
| 1-144, gnl|Hg17|chr15 (79403540-79403397) | |
| 1-144, gnl|loxAfr1|scaffold_9377 (37009-37194) | |
| 1-144, gnl|mm7|chr7 (79553781-79553609) | |
| 1-144, gnl|Mm7|chr7 (79553593-79553719) | |
| 1-144, gnl|monDom2|scaffold_45 (5492385-5492206) | |
| 1-144, gnl|oryCun1|scaffold_177684 (85209-85369) | |
| 1-144, gnl|panTro1|chr16 (80132289-80132473) | |
| 1-144, gnl|rheMac2|chr7 (60477825-60478009) | |
| 1-144, gnl|rn3|chr1 (139974885-139974713) | |
| 195-327, gnl|bosTau2|chr21 (19917402-19917270) | |
| 195-327, gnl|Hg17|chr15 (79401936-79401804) | |
| 195-327, gnl|Mm7|chr7 (79554710-79554842) | |
| 338-445, gnl|bosTau2|chr21 (19914293-19914186) | |
| 338-445, gnl|canFam2|chr3 (59331168-59331025) | |
| 338-445, gnl|danRer3|chrUn (57456630-57456490) | |
| 338-445, gnl|echTel1|scaffold_322787 (649-789) | |
| 338-445, gnl|galGal2|chr10 (12688471-12688331) | |
| 338-445, gnl|hg17|chr15 (79398723-79398870) | |
| 338-445, gnl|Hg17|chr15 (79398842-79398735) | |
| 338-445, gnl|loxAfr1|scaffold_9377 (28961-29104) | |
| 338-445, gnl|mm7|chr7 (79558458-79558315) | |
| 338-445, gnl|Mm7|chr7 (79558341-79558448) | |
| 338-445, gnl|monDom2|scaffold_45 (5503828-5503682) | |
| 338-445, gnl|oryCun1|scaffold_177684 (80494-80636) | |
| 338-445, gnl|panTro1|chr16 (80127912-80128059) | |
| 338-445, gnl|rheMac2|chr7 (60473597-60473744) | |
| 338-445, gnl|rn3|chr1 (139979562-139979419) | |
| 338-445, gnl|tetNig1|chrUn_random (32726883-32726996) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) | |
| eep (0.122564) | |
| cty (0.10408) |