Ss1.1-Tes1-TES01D020022.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTCTGGCTGGAGGGCCTCTCGCTGGGACACTTACCTGACCATGAGCGATGTGCAGATCC ACTGGTTTTCTATCATCAACTCCGTTGTGGTGGTCTTCTTCCTATCAGGCATCCTGAGCA TGATTATCATTCGGACCCTCCGGAAGGACATCGCCAACTATAACAAGGAGGATGACATTG AAGACACCATGGAAGAGTCTGGGTGGAAGCTGGTGCATGGCGACGTCTTCAGGCCCCCCC AGTATCCCATGATCCTCAGCTCCCTGCTGGGCTCAGGCATTCAGCTCTTCTGTATGATCC TCATCGTCATCTTTGTGGCCATGCTTGGGATGCTGTCACCCTCTAGCCGGGGAGCTCTCA TGACCACAGCCTGCTTCCTCTTCATGTTCATGGGGGTGTTTGGTGGATTTTCCGCCGGCC GTCTGTACCGCACTCTAAAAGGCCATCGGTGGAAGAAAGGAGCCTTCTGTACGGCGACAC TGTACCCTGGCGTGGTTTTCGGCATCTGCTTCGTGTTGAATTGCTTCATCTGGGGAAAGC ATTCGTCAGGAGCGGTGCCCTTCCCCACCATGGTGGCCCTGCTGTGCATGTGGTTCGGGA TCTCCCTGCCCCTCGTCTACCTGGGCTACTACTTCGGATTCCGGAAGCAGCCATATGACA ACCCCGTGCGTACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGATGGTACATGAACC GATTTGTGGGCATTCTCATGGAAGGGATACTGCCCTTCGGCGCCATGTTCATCGAGCTTT TCTTCATCTTCAGTGCCATCTGGGAGAATCAATTCTATTACCTCTTCGGCTTCCTGTTCC TCGTCTTCATCATCCTGGTGGCGTCCTGTTCGCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTCTGGCTGGAGGGCCTCTCGCTGGGACACTTACCTGACCATGAGCGATGTGCAGATCC ACTGGTTTTCTATCATCAACTCCGTTGTGGTGGTCTTCTTCCTATCAGGCATCCTGAGCA TGATTATCATTCGGACCCTCCGGAAGGACATCGCCAACTATAACAAGGAGGATGACATTG AAGACACCATGGAAGAGTCTGGGTGGAAGCTGGTGCATGGCGACGTCTTCAGGCCCCCCC AGTATCCCATGATCCTCAGCTCCCTGCTGGGCTCAGGCATTCAGCTCTTCTGTATGATCC TCATCGTCATCTTTGTGGCCATGCTTGGGATGCTGTCACCCTCTAGCCGGGGAGCTCTCA TGACCACAGCCTGCTTCCTCTTCATGTTCATGGGGGTGTTTGGTGGATTTTCCGCCGGCC GTCTGTACCGCACTCTAAAAGGCCATCGGTGGAAGAAAGGAGCCTTCTGTACGGCGACAC TGTACCCTGGCGTGGTTTTCGGCATCTGCTTCGTGTTGAATTGCTTCATCTGGGGAAAGC ATTCGTCAGGAGCGGTGCCCTTCCCCACCATGGTGGCCCTGCTGTGCATGTGGTTCGGGA TCTCCCTGCCCCTCGTCTACCTGGGCTACTACTTCGGATTCCGGAAGCAGCCATATGACA ACCCCGTGCGTACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGATGGTACATGAACC GATTTGTGGGCATTCTCATGGAAGGGATACTGCCCTTCGGCGCCATGTTCATCGAGCTTT TCTTCATCTTCAGTGCCATCTGGGAGAATCAATTCTATTACCTCTTCGGCTTCCTGTTCC TCGTCTTCATCATCCTGGTGGCGTCCTGTTCGCAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 180-324, gnl|bosTau2|chr13 (42367876-42367730) | |
| 180-324, gnl|canFam2|chr24 (24529429-24529564) | |
| 180-324, gnl|danRer3|chr21 (26971641-26971506) | |
| 180-324, gnl|dasNov1|scaffold_44342 (519-394) | |
| 180-324, gnl|echTel1|scaffold_177216 (529-664) | |
| 180-324, gnl|fr1|chrUn (272055552-272055417) | |
| 180-324, gnl|galGal2|chr20 (9690336-9690471) | |
| 180-324, gnl|hg17|chr20 (30201096-30201231) | |
| 180-324, gnl|Hg17|chr20 (30201098-30201245) | |
| 180-324, gnl|mm7|chr2 (152935132-152935267) | |
| 180-324, gnl|Mm7|chr2 (152935134-152935280) | |
| 180-324, gnl|monDom2|scaffold_38 (906977-906842) | |
| 180-324, gnl|oryCun1|scaffold_203472 (10391-10256) | |
| 180-324, gnl|panTro1|chr21 (31899273-31899408) | |
| 180-324, gnl|rheMac2|chr10 (32423068-32422933) | |
| 180-324, gnl|rn3|chr3 (143449313-143449448) | |
| 180-324, gnl|tetNig1|chrUn_random (109857885-109857750) | |
| 180-324, gnl|xenTro1|scaffold_775 (44631-44766) | |
| 554-730, gnl|bosTau2|chr13 (42362267-42362091) | |
| 554-730, gnl|canFam2|chr24 (24534981-24535207) | |
| 554-730, gnl|danRer3|chr15 (28254097-28253894) | |
| 554-730, gnl|dasNov1|scaffold_79582 (7270-7042) | |
| 554-730, gnl|echTel1|scaffold_177216 (3806-4037) | |
| 554-730, gnl|fr1|chrUn (272053932-272053720) | |
| 554-730, gnl|galGal2|chr20 (9691923-9692126) | |
| 554-730, gnl|hg17|chr20 (30209217-30209445) | |
| 554-730, gnl|Hg17|chr20 (30209257-30209433) | |
| 554-730, gnl|loxAfr1|scaffold_133099 (4388-4618) | |
| 554-730, gnl|mm7|chr2 (152941460-152941685) | |
| 554-730, gnl|Mm7|chr2 (152941499-152941675) | |
| 554-730, gnl|monDom2|scaffold_38 (895507-895305) | |
| 554-730, gnl|oryCun1|scaffold_203472 (4749-4521) | |
| 554-730, gnl|panTro1|chr21 (31907398-31907626) | |
| 554-730, gnl|rheMac2|chr10 (32414671-32414443) | |
| 554-730, gnl|rn3|chr3 (143455097-143455322) | |
| 554-730, gnl|tetNig1|chrUn_random (109857103-109856914) | |
| 554-730, gnl|xenTro1|scaffold_775 (47529-47724) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 180-324, gnl|bosTau2|chr13 (42367876-42367730) | |
| 180-324, gnl|canFam2|chr24 (24529429-24529564) | |
| 180-324, gnl|danRer3|chr21 (26971641-26971506) | |
| 180-324, gnl|dasNov1|scaffold_44342 (519-394) | |
| 180-324, gnl|echTel1|scaffold_177216 (529-664) | |
| 180-324, gnl|fr1|chrUn (272055552-272055417) | |
| 180-324, gnl|galGal2|chr20 (9690336-9690471) | |
| 180-324, gnl|hg17|chr20 (30201096-30201231) | |
| 180-324, gnl|Hg17|chr20 (30201098-30201245) | |
| 180-324, gnl|mm7|chr2 (152935132-152935267) | |
| 180-324, gnl|Mm7|chr2 (152935134-152935280) | |
| 180-324, gnl|monDom2|scaffold_38 (906977-906842) | |
| 180-324, gnl|oryCun1|scaffold_203472 (10391-10256) | |
| 180-324, gnl|panTro1|chr21 (31899273-31899408) | |
| 180-324, gnl|rheMac2|chr10 (32423068-32422933) | |
| 180-324, gnl|rn3|chr3 (143449313-143449448) | |
| 180-324, gnl|tetNig1|chrUn_random (109857885-109857750) | |
| 180-324, gnl|xenTro1|scaffold_775 (44631-44766) | |
| 554-730, gnl|bosTau2|chr13 (42362267-42362091) | |
| 554-730, gnl|canFam2|chr24 (24534981-24535207) | |
| 554-730, gnl|danRer3|chr15 (28254097-28253894) | |
| 554-730, gnl|dasNov1|scaffold_79582 (7270-7042) | |
| 554-730, gnl|echTel1|scaffold_177216 (3806-4037) | |
| 554-730, gnl|fr1|chrUn (272053932-272053720) | |
| 554-730, gnl|galGal2|chr20 (9691923-9692126) | |
| 554-730, gnl|hg17|chr20 (30209217-30209445) | |
| 554-730, gnl|Hg17|chr20 (30209257-30209433) | |
| 554-730, gnl|loxAfr1|scaffold_133099 (4388-4618) | |
| 554-730, gnl|mm7|chr2 (152941460-152941685) | |
| 554-730, gnl|Mm7|chr2 (152941499-152941675) | |
| 554-730, gnl|monDom2|scaffold_38 (895507-895305) | |
| 554-730, gnl|oryCun1|scaffold_203472 (4749-4521) | |
| 554-730, gnl|panTro1|chr21 (31907398-31907626) | |
| 554-730, gnl|rheMac2|chr10 (32414671-32414443) | |
| 554-730, gnl|rn3|chr3 (143455097-143455322) | |
| 554-730, gnl|tetNig1|chrUn_random (109857103-109856914) | |
| 554-730, gnl|xenTro1|scaffold_775 (47529-47724) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.120642) |