Ss1.1-Tes1-TES01D020046.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTTCACTAAAGCTTACAGAGGGTTGCTGGGACCAGCACTGTCTGGGAGGTACCCACCC AGTGGCAGCCACCTTTCCCAGGTCCCTGCTTCTCTTAGCCATGGCTCCAAAGCGCAAGCC TGGGGTGCAACGTGAGGGCCCTGAGAAGAAGAAGGGGAGGCAGGGGGCAGAAGAGGAGGA CAGTTTCCGCTCCACTGCTGAGGCCCTCAGAGCTGCACCCACAGAGAAGCGCATCATCCG AGTGGACCCCCTGTGCCCACTCAGCCACAACCCCGGGACCAAGGTGCATGAAGACTACGA CTGCACCCTGAACCAGACCAACATCGGGAGTAACAACAACAAGTTCTACATCATCCAGCT GCTGGAAGAGGGTGACCGCTTCATCTGCTGGAACCGCTGGGGCCGTGTGGGAGAGGTGGG CCAGTCGAAGCTCAGCCACTTCGTGTCACTGGAGGATGCAAAGAAAGACTTTGAGAAGAA ATTTCGGGACAAGACTAAGAACAGCTGGGCAGAGAGGGAATACTTTGTGGCCCACCCCGG CAAGTACACACTTATTGATGTACAGAGAGAGGACAAGGTCCAAGAAGCCGTGGTGAAGGT AGACGGAGGCCCAGTGAGGACTGTGGTTCAGCAGGTGCAGCCCTGCTCCCTGGATGCAGC CACACAGAAGCTCATCACCAACATCTTCAGCAAGGACATGTTCAAGAATGCCATGGCCCT CATGAACCTCGATGTGAAGAAGATGCCCTTGGGAAAGTTGAGCAAGCAGCAGATTGCCCG GGGCTTTGAGGCCTTGGAGGCGCTGGAGGTGGCCCTGAAAGCCCCTGCACACAGTGGCCT CAGCCTGGAGGAGCTGTCCTCCCACTTCTACACCGTCATTCCCCACAACTTTGGCCGCAA CCGGCCTCCGCCCATCAATTCCCCTGAGCTTCTGCAGGCCAAGAAGGACATGCTGCTGGT GCTGGCGGACATAGAGCTGGCCCAGACCCTGCAGGCAGCCCCCGAGGAGACAAAGAAAGT GGAGGAGGTGCCACACCCACTGGACCGAGATTATCAGCTTCTCAAGTGTCAGCTCCAACT GTTGGATCCAGAGGCGCCTGAGTACAAGGTGATATACACCTACTTAGAACAGACTGGCAA CAACTACAGGTGCCCTGCTCTCCAACATGTTTGGAAAGTGAACCGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTTCACTAAAGCTTACAGAGGGTTGCTGGGACCAGCACTGTCTGGGAGGTACCCACCC AGTGGCAGCCACCTTTCCCAGGTCCCTGCTTCTCTTAGCCATGGCTCCAAAGCGCAAGCC TGGGGTGCAACGTGAGGGCCCTGAGAAGAAGAAGGGGAGGCAGGGGGCAGAAGAGGAGGA CAGTTTCCGCTCCACTGCTGAGGCCCTCAGAGCTGCACCCACAGAGAAGCGCATCATCCG AGTGGACCCCCTGTGCCCACTCAGCCACAACCCCGGGACCAAGGTGCATGAAGACTACGA CTGCACCCTGAACCAGACCAACATCGGGAGTAACAACAACAAGTTCTACATCATCCAGCT GCTGGAAGAGGGTGACCGCTTCATCTGCTGGAACCGCTGGGGCCGTGTGGGAGAGGTGGG CCAGTCGAAGCTCAGCCACTTCGTGTCACTGGAGGATGCAAAGAAAGACTTTGAGAAGAA ATTTCGGGACAAGACTAAGAACAGCTGGGCAGAGAGGGAATACTTTGTGGCCCACCCCGG CAAGTACACACTTATTGATGTACAGAGAGAGGACAAGGTCCAAGAAGCCGTGGTGAAGGT AGACGGAGGCCCAGTGAGGACTGTGGTTCAGCAGGTGCAGCCCTGCTCCCTGGATGCAGC CACACAGAAGCTCATCACCAACATCTTCAGCAAGGACATGTTCAAGAATGCCATGGCCCT CATGAACCTCGATGTGAAGAAGATGCCCTTGGGAAAGTTGAGCAAGCAGCAGATTGCCCG GGGCTTTGAGGCCTTGGAGGCGCTGGAGGTGGCCCTGAAAGCCCCTGCACACAGTGGCCT CAGCCTGGAGGAGCTGTCCTCCCACTTCTACACCGTCATTCCCCACAACTTTGGCCGCAA CCGGCCTCCGCCCATCAATTCCCCTGAGCTTCTGCAGGCCAAGAAGGACATGCTGCTGGT GCTGGCGGACATAGAGCTGGCCCAGACCCTGCAGGCAGCCCCCGAGGAGACAAAGAAAGT GGAGGAGGTGCCACACCCACTGGACCGAGATTATCAGCTTCTCAAGTGTCAGCTCCAACT GTTGGATCCAGAGGCGCCTGAGTACAAGGTGATATACACCTACTTAGAACAGACTGGCAA CAACTACAGGTGCCCTGCTCTCCAACATGTTTGGAAAGTGAACCGAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 97-285, gnl|bosTau2|chr22 (36455524-36455712) | |
| 97-285, gnl|canFam2|chr20 (40768678-40768489) | |
| 97-285, gnl|dasNov1|scaffold_18091 (11300-11136) | |
| 97-285, gnl|echTel1|scaffold_305754 (5074-5262) | |
| 97-285, gnl|galGal2|chr12 (2787400-2787221) | |
| 97-285, gnl|hg17|chr3 (51952390-51952579) | |
| 97-285, gnl|Hg17|chr3 (51952408-51952596) | |
| 97-285, gnl|loxAfr1|scaffold_531 (116424-116238) | |
| 97-285, gnl|mm7|chr9 (106205446-106205264) | |
| 97-285, gnl|Mm7|chr9 (106205427-106205245) | |
| 97-285, gnl|monDom2|scaffold_5 (71777320-71777131) | |
| 97-285, gnl|oryCun1|scaffold_147100 (16-206) | |
| 97-285, gnl|panTro1|chr2 (53561303-53561492) | |
| 97-285, gnl|rheMac2|chr2 (84454966-84454777) | |
| 97-285, gnl|rn3|chr8 (111640070-111639888) | |
| 97-285, gnl|xenTro1|scaffold_189 (1684783-1685017) | |
| 409-620, gnl|bosTau2|chr22 (36456437-36456645) | |
| 409-620, gnl|Hg17|chr3 (51953445-51953653) | |
| 409-620, gnl|Mm7|chr9 (106204317-106204109) | |
| 718-971, gnl|bosTau2|chr22 (36456992-36457244) | |
| 718-971, gnl|Hg17|chr3 (51954040-51954293) | |
| 718-971, gnl|Mm7|chr9 (106203748-106203485) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-285, gnl|bosTau2|chr22 (36455524-36455712) | |
| 97-285, gnl|canFam2|chr20 (40768678-40768489) | |
| 97-285, gnl|dasNov1|scaffold_18091 (11300-11136) | |
| 97-285, gnl|echTel1|scaffold_305754 (5074-5262) | |
| 97-285, gnl|galGal2|chr12 (2787400-2787221) | |
| 97-285, gnl|hg17|chr3 (51952390-51952579) | |
| 97-285, gnl|Hg17|chr3 (51952408-51952596) | |
| 97-285, gnl|loxAfr1|scaffold_531 (116424-116238) | |
| 97-285, gnl|mm7|chr9 (106205446-106205264) | |
| 97-285, gnl|Mm7|chr9 (106205427-106205245) | |
| 97-285, gnl|monDom2|scaffold_5 (71777320-71777131) | |
| 97-285, gnl|oryCun1|scaffold_147100 (16-206) | |
| 97-285, gnl|panTro1|chr2 (53561303-53561492) | |
| 97-285, gnl|rheMac2|chr2 (84454966-84454777) | |
| 97-285, gnl|rn3|chr8 (111640070-111639888) | |
| 97-285, gnl|xenTro1|scaffold_189 (1684783-1685017) | |
| 409-620, gnl|bosTau2|chr22 (36456437-36456645) | |
| 409-620, gnl|Hg17|chr3 (51953445-51953653) | |
| 409-620, gnl|Mm7|chr9 (106204317-106204109) | |
| 718-971, gnl|bosTau2|chr22 (36456992-36457244) | |
| 718-971, gnl|Hg17|chr3 (51954040-51954293) | |
| 718-971, gnl|Mm7|chr9 (106203748-106203485) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| eje (0.197668) | |
| ste (0.135208) | |
| nmm (0.132802) | |
| cov (0.132153) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.197668) | |
| ste (0.135208) | |
| nmm (0.132802) | |
| cov (0.132153) |