Ss1.1-Tes1-TES01D030081.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TATTTCAGCATGTTCTTCAACGCTTGGTTTGGCCTCATTGTGTTCCTGTGCATGAGTCTT TACCTCTTCCTGACCATTGTGGTCACTGAGTGGAGAGCAAAGTTTAGACGTGCCATGAAC ACACAGGAGAATGCCACCCGCGCCCGAGCCGTGGACTCTTTGCTAAACTTTGAGACGGTG AAGTATTACAACGCGGAGGGCTATGAAGTGGAGCGCTATCGAGAGGCCATCATCAAATAT CAGAGTTTGGAGTGGCAGTCGAGCGCTTCGCTGGTTTTGCTAAACCAGACCCAGAACCTG GTGATTGGACTCGGGCTCCTCACTGGCTCCCTGCTTTGCGCATACTTTGTCAGTGAGCAG AAACTGCAGGTTGGGGACTACGTGCTATTCGGCACCTACATCATCCAGCTGTACATGCCC CTCAACTGGTTTGGCACCTACTACAGGATGATCCAGACCAACTTCATCGACATGGAGAAC ATGTTCGATCTGCTGAAAGAGGAGACAGAAGTGAAGGACGCTCCTGGAGCAGGGCCCCTT CGCTTTCAGAGGGGCCAGATTGAGTTTGAGAATGTGCACTTCAGCTACACCGATGGGCGG GAGACCCTGCAGGATGTGTCCTTCACTGTGATGCCTGGACAGACGCTGGCCCTGGTGGGC CCATCTGGAGCAGGGAAGAGCACAATTTTGCGCTTGCTGTTTCGCTTCTATGACATCACC TCTGGCTGCATCCGAATCGATGGGCAGGACATTTCGCAGGTGACCCAGGTGTCTCTGCGG TCTCACATTGGAGTCGTGCCCCAGGACACTGTCCTCTTCAACGACACCATCGCCAACAAC ATCCGCTACGGCCGCATCACGGCTGGGAACGATGAGGTGCAGGCTGCGGCTCAGGCTGCA GGCATCCACGACACCATCATGGCTTTCCCAGAAGGGTACGAGACGCAGGTGGGCGAGCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TATTTCAGCATGTTCTTCAACGCTTGGTTTGGCCTCATTGTGTTCCTGTGCATGAGTCTT TACCTCTTCCTGACCATTGTGGTCACTGAGTGGAGAGCAAAGTTTAGACGTGCCATGAAC ACACAGGAGAATGCCACCCGCGCCCGAGCCGTGGACTCTTTGCTAAACTTTGAGACGGTG AAGTATTACAACGCGGAGGGCTATGAAGTGGAGCGCTATCGAGAGGCCATCATCAAATAT CAGAGTTTGGAGTGGCAGTCGAGCGCTTCGCTGGTTTTGCTAAACCAGACCCAGAACCTG GTGATTGGACTCGGGCTCCTCACTGGCTCCCTGCTTTGCGCATACTTTGTCAGTGAGCAG AAACTGCAGGTTGGGGACTACGTGCTATTCGGCACCTACATCATCCAGCTGTACATGCCC CTCAACTGGTTTGGCACCTACTACAGGATGATCCAGACCAACTTCATCGACATGGAGAAC ATGTTCGATCTGCTGAAAGAGGAGACAGAAGTGAAGGACGCTCCTGGAGCAGGGCCCCTT CGCTTTCAGAGGGGCCAGATTGAGTTTGAGAATGTGCACTTCAGCTACACCGATGGGCGG GAGACCCTGCAGGATGTGTCCTTCACTGTGATGCCTGGACAGACGCTGGCCCTGGTGGGC CCATCTGGAGCAGGGAAGAGCACAATTTTGCGCTTGCTGTTTCGCTTCTATGACATCACC TCTGGCTGCATCCGAATCGATGGGCAGGACATTTCGCAGGTGACCCAGGTGTCTCTGCGG TCTCACATTGGAGTCGTGCCCCAGGACACTGTCCTCTTCAACGACACCATCGCCAACAAC ATCCGCTACGGCCGCATCACGGCTGGGAACGATGAGGTGCAGGCTGCGGCTCAGGCTGCA GGCATCCACGACACCATCATGGCTTTCCCAGAAGGGTACGAGACGCAGGTGGGCGAGCGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 69-179, gnl|bosTau2|chr2 (65158620-65158510) | |
| 69-179, gnl|canFam2|chr37 (28763608-28763758) | |
| 69-179, gnl|danRer3|chr1 (932643-932504) | |
| 69-179, gnl|dasNov1|scaffold_4192 (10596-10448) | |
| 69-179, gnl|echTel1|scaffold_308242 (96978-97114) | |
| 69-179, gnl|fr1|chrUn (241330157-241330031) | |
| 69-179, gnl|hg17|chr2 (219904614-219904752) | |
| 69-179, gnl|Hg17|chr2 (219904724-219904614) | |
| 69-179, gnl|loxAfr1|scaffold_145 (62110-62266) | |
| 69-179, gnl|mm7|chr1 (75398754-75398880) | |
| 69-179, gnl|Mm7|chr1 (75398864-75398754) | |
| 69-179, gnl|monDom2|scaffold_39 (1338713-1338570) | |
| 69-179, gnl|oryCun1|scaffold_198528 (90000-90143) | |
| 69-179, gnl|panTro1|chr13 (110067548-110067686) | |
| 69-179, gnl|rheMac2|chr12 (83068247-83068385) | |
| 69-179, gnl|rn3|chr9 (74605404-74605543) | |
| 69-179, gnl|tetNig1|chr3 (6200019-6199904) | |
| 69-179, gnl|xenTro1|scaffold_31 (2322457-2322596) | |
| 242-377, gnl|bosTau2|chr2 (65158092-65157957) | |
| 242-377, gnl|Hg17|chr2 (219904180-219904045) | |
| 242-377, gnl|Mm7|chr1 (75398078-75397941) | |
| 757-935, gnl|bosTau2|chr2 (65156027-65155849) | |
| 757-935, gnl|Hg17|chr2 (219901338-219901160) | |
| 757-935, gnl|Mm7|chr1 (75396217-75396039) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-179, gnl|bosTau2|chr2 (65158620-65158510) | |
| 69-179, gnl|canFam2|chr37 (28763608-28763758) | |
| 69-179, gnl|danRer3|chr1 (932643-932504) | |
| 69-179, gnl|dasNov1|scaffold_4192 (10596-10448) | |
| 69-179, gnl|echTel1|scaffold_308242 (96978-97114) | |
| 69-179, gnl|fr1|chrUn (241330157-241330031) | |
| 69-179, gnl|hg17|chr2 (219904614-219904752) | |
| 69-179, gnl|Hg17|chr2 (219904724-219904614) | |
| 69-179, gnl|loxAfr1|scaffold_145 (62110-62266) | |
| 69-179, gnl|mm7|chr1 (75398754-75398880) | |
| 69-179, gnl|Mm7|chr1 (75398864-75398754) | |
| 69-179, gnl|monDom2|scaffold_39 (1338713-1338570) | |
| 69-179, gnl|oryCun1|scaffold_198528 (90000-90143) | |
| 69-179, gnl|panTro1|chr13 (110067548-110067686) | |
| 69-179, gnl|rheMac2|chr12 (83068247-83068385) | |
| 69-179, gnl|rn3|chr9 (74605404-74605543) | |
| 69-179, gnl|tetNig1|chr3 (6200019-6199904) | |
| 69-179, gnl|xenTro1|scaffold_31 (2322457-2322596) | |
| 242-377, gnl|bosTau2|chr2 (65158092-65157957) | |
| 242-377, gnl|Hg17|chr2 (219904180-219904045) | |
| 242-377, gnl|Mm7|chr1 (75398078-75397941) | |
| 757-935, gnl|bosTau2|chr2 (65156027-65155849) | |
| 757-935, gnl|Hg17|chr2 (219901338-219901160) | |
| 757-935, gnl|Mm7|chr1 (75396217-75396039) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nms (0.213858) | |
| che (0.136314) | |
| nbm (0.0993246) |