Ss1.1-Tes1-TES01D060038.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCCGCTTGCTTGCCCAGGAGTGTGCCGTGTGCGGCTGGGCCTTGCCCCGAAACCGGAT GCAGGCCCTGACCTCCTGTGAGTGCACCATCTGTCCCGACTGCTTCCGCCAGCACTTCAC CATCGCCTTGAAGGAGAAGCACATCACAGACATGGTGTGCCCTGCCTGTGGCCGCCCCGA CCTCACAGATGACACACAGTTGCTCAGCTACTTCTCCACCCTCGATATCCAGCTTCGAGA GAGCCTAGAGCCAGATGCCTATGCGCTGTTCCACAAGAAGCTGACTGAGGGCGTGCTCAT GCGGGACCCCAAGTTCCTGTGGTGTGCCCAGTGCTCCTTCGGCTTCATATATGAGCGTGA GCAGCTGGAGGCAACATGTCCCCAGTGTCACCAGACCTTCTGTGTGCGCTGTAAGCGTCA GTGGGAGGAGCAGCACCGAGGCCGGAACTGTGAAGATTTCCAGAACTGGAAACGCACCAA TGACCCGGAGTACCAGGCCCAGGGCTTGGCGATGTACCTTCAGGAAAATGGCATAGACTG CCCCAAGTGCAAGTTCTCGTACGCACTGGCCCGAGGAGGCTGCATGCACTTTCACTGCAC CCAGTGCCGCCACCAGTTCTGCAGTGGCTGCTACAATGCCTTTTATGCCAAGAATACCCT CCAATGTCTCCATCTCCCCTGGCCCCCACACCCCTCACGCAGGGGTTCCTGAGAGACCAG GCCCCCAACAGTCTCCAACTGCCCCTCTCCCATCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCCGCTTGCTTGCCCAGGAGTGTGCCGTGTGCGGCTGGGCCTTGCCCCGAAACCGGAT GCAGGCCCTGACCTCCTGTGAGTGCACCATCTGTCCCGACTGCTTCCGCCAGCACTTCAC CATCGCCTTGAAGGAGAAGCACATCACAGACATGGTGTGCCCTGCCTGTGGCCGCCCCGA CCTCACAGATGACACACAGTTGCTCAGCTACTTCTCCACCCTCGATATCCAGCTTCGAGA GAGCCTAGAGCCAGATGCCTATGCGCTGTTCCACAAGAAGCTGACTGAGGGCGTGCTCAT GCGGGACCCCAAGTTCCTGTGGTGTGCCCAGTGCTCCTTCGGCTTCATATATGAGCGTGA GCAGCTGGAGGCAACATGTCCCCAGTGTCACCAGACCTTCTGTGTGCGCTGTAAGCGTCA GTGGGAGGAGCAGCACCGAGGCCGGAACTGTGAAGATTTCCAGAACTGGAAACGCACCAA TGACCCGGAGTACCAGGCCCAGGGCTTGGCGATGTACCTTCAGGAAAATGGCATAGACTG CCCCAAGTGCAAGTTCTCGTACGCACTGGCCCGAGGAGGCTGCATGCACTTTCACTGCAC CCAGTGCCGCCACCAGTTCTGCAGTGGCTGCTACAATGCCTTTTATGCCAAGAATACCCT CCAATGTCTCCATCTCCCCTGGCCCCCACACCCCTCACGCAGGGGTTCCTGAGAGACCAG GCCCCCAACAGTCTCCAACTGCCCCTCTCCCATCTG |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 42-232, gnl|bosTau2|chr10 (12355087-12354897) | |
| 42-232, gnl|Hg17|chr14 (23694191-23694379) | |
| 42-232, gnl|Mm7|chr14 (50465967-50466159) | |
| 535-655, gnl|bosTau2|chr10 (12352886-12352766) | |
| 535-655, gnl|canFam2|chr8 (7155269-7155407) | |
| 535-655, gnl|danRer3|chr24 (3732933-3733073) | |
| 535-655, gnl|dasNov1|scaffold_46711 (3720-3582) | |
| 535-655, gnl|echTel1|scaffold_316077 (38145-38283) | |
| 535-655, gnl|fr1|chrUn (161125538-161125660) | |
| 535-655, gnl|hg17|chr14 (23696555-23696693) | |
| 535-655, gnl|Hg17|chr14 (23696567-23696687) | |
| 535-655, gnl|loxAfr1|scaffold_1306 (128638-128776) | |
| 535-655, gnl|mm7|chr14 (50468609-50468751) | |
| 535-655, gnl|Mm7|chr14 (50468625-50468745) | |
| 535-655, gnl|monDom2|scaffold_12 (25608853-25608715) | |
| 535-655, gnl|panTro1|chr15 (22598225-22598363) | |
| 535-655, gnl|rheMac2|chr7 (87051273-87051411) | |
| 535-655, gnl|rn3|chr15 (33752432-33752569) | |
| 535-655, gnl|tetNig1|chrUn_random (132818861-132818983) | |
| 535-655, gnl|xenTro1|scaffold_53 (477571-477700) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-232, gnl|bosTau2|chr10 (12355087-12354897) | |
| 42-232, gnl|Hg17|chr14 (23694191-23694379) | |
| 42-232, gnl|Mm7|chr14 (50465967-50466159) | |
| 535-655, gnl|bosTau2|chr10 (12352886-12352766) | |
| 535-655, gnl|canFam2|chr8 (7155269-7155407) | |
| 535-655, gnl|danRer3|chr24 (3732933-3733073) | |
| 535-655, gnl|dasNov1|scaffold_46711 (3720-3582) | |
| 535-655, gnl|echTel1|scaffold_316077 (38145-38283) | |
| 535-655, gnl|fr1|chrUn (161125538-161125660) | |
| 535-655, gnl|hg17|chr14 (23696555-23696693) | |
| 535-655, gnl|Hg17|chr14 (23696567-23696687) | |
| 535-655, gnl|loxAfr1|scaffold_1306 (128638-128776) | |
| 535-655, gnl|mm7|chr14 (50468609-50468751) | |
| 535-655, gnl|Mm7|chr14 (50468625-50468745) | |
| 535-655, gnl|monDom2|scaffold_12 (25608853-25608715) | |
| 535-655, gnl|panTro1|chr15 (22598225-22598363) | |
| 535-655, gnl|rheMac2|chr7 (87051273-87051411) | |
| 535-655, gnl|rn3|chr15 (33752432-33752569) | |
| 535-655, gnl|tetNig1|chrUn_random (132818861-132818983) | |
| 535-655, gnl|xenTro1|scaffold_53 (477571-477700) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.132153) |