Non-Coding RNA Search

Ss1.1-Tes1-TES01D100006.5

Sequence:


               
               GGGTATTCATGGAACCATGCTTTTGTCGTTTTATACTTTGCTAGGTAGACTTTATTACCC
ACCCCCGACTATGCCCTCATTTTTTTAAAAAAGGAAAAAAAAAAAGACATTGGGTTTCAG
TCTTAATCCATTTTCCGTGCCAGGTTTGATTTTCGTGTGTGCGTGTGAGTGTGTTCCGTT
TCGTGTATTGTTTTTTTTGTTGTTGTTGTTTTCTGTTGTTCGGTTTTACCTGCTCCCCTC
CAGTCCCATACTTTACAGCACTCTGGTGCAGGAAGAAGCAGAAGCAAAAAAGAAAAAAAA
AAAAAAAAATTTAAAAAGAAAAAAAAAAAGAAGAGCCGAGACATGCCACCTTTCCCTTCG
CACTGTTGCTTTTCCTGATGGTTAATATGCTGTCACGTAGCTGTGTTCAGAGATGTGAAA
TACTTTCAGGCAAAAATAAACTGTAAGTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTATTCATGGAACCATGCTTTTGTCGTTTTATACTTTGCTAGGTAGACTTTATTACCC
ACCCCCGACTATGCCCTCATTTTTTTAAAAAAGGAAAAAAAAAAAGACATTGGGTTTCAG
TCTTAATCCATTTTCCGTGCCAGGTTTGATTTTCGTGTGTGCGTGTGAGTGTGTTCCGTT
TCGTGTATTGTTTTTTTTGTTGTTGTTGTTTTCTGTTGTTCGGTTTTACCTGCTCCCCTC
CAGTCCCATACTTTACAGCACTCTGGTGCAGGAAGAAGCAGAAGCAAAAAAGAAAAAAAA
AAAAAAAAATTTAAAAAGAAAAAAAAAAAGAAGAGCCGAGACATGCCACCTTTCCCTTCG
CACTGTTGCTTTTCCTGATGGTTAATATGCTGTCACGTAGCTGTGTTCAGAGATGTGAAA
TACTTTCAGGCAAAAATAAACTGTAAGTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               188-474, gnl|bosTau2|chr12 (23442012-23442283)
               

               
               188-474, gnl|Hg17|chr16 (80302574-80302868)
               

               
               188-474, gnl|Mm7|chr8 (116074656-116075003)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               188-474, gnl|bosTau2|chr12 (23442012-23442283)
               

               
               188-474, gnl|Hg17|chr16 (80302574-80302868)
               

               
               188-474, gnl|Mm7|chr8 (116074656-116075003)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               col (0.195008)
               

               
               fhi (0.169578)
               

               
               eru (0.120048)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               fhi (0.169578)
               

               
               eru (0.120048)

	188-474, gnl\|bosTau2\|chr12 (23442012-23442283)
	188-474, gnl\|Hg17\|chr16 (80302574-80302868)
	188-474, gnl\|Mm7\|chr8 (116074656-116075003)