Ss1.1-Tes1-TES01F120005.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGAGCGGCGCGAGGGGACAGGGCCGCACGGGTCCCAGGTCCCGGGGTGGCCTGTGCAC CCAAGTTTCCCTTGCGCCGCGCTTCCTGATGTGGCCGAAGACGTGATTGGAAGCGCCGGC GGCCGCCCGCGGACGATGCTCGGGTTTCTGGGTGCGACGACCCTGATGCTGGTCGCTGGG GCTCCGTGGGTGTTGCCCGCAGGGGGTGCAGATCTCAGATCTCCTGAAAATGTCGTGGTC TCTATCATTGATGACAACTTCATCCTGAAATGGAAGAGCAGCAGTGAATCCGTCAGCAAT GTGACTTTTTCAGCAGATTATCAAATAACAGGGATGGATAATTGGATAAAGTTGCCTGGA TGTCAATATGTTACTAGCACTGAATGCAACTTTTCTTCCATCAAGCTTAAAAGCGTGTAT GAAAAAATTAAATTGCGTATAAGAGCAGAAACAGGAAACAGCACTTCTCCGTGGTATGAG GTTGAGCCGTTTATACCATTTCAAGAAGCACAAATTGGCCCTCCAGATGTACATTTAGAA GCCGAAGATAAAGCAATAATAATAAACCTCTCTCCTCCTGGCACAAAAAACAGTGTCATG TGGGCTATGGATAGTTCAAGTTTCGTGTATAGCTTAGTTATCTGGAAAAACTCTTCAAGT CTAGAAGAAAGGACTAAAACTGTTTATGCCAGAGATAAAATTCACCAACTCTCACCAGAG ACAACTTACTGTTTAAAAGTTAAAGCCGGACTCCGTTCGCCAAGAAAAGTCGGTGTCTAC AGTCCAGTGTATTGTATAAATACCACAGTGAAACATCACCTGCCTTCACCAGAAAATCTA GAAATTAATGCTGAAAACCGGGTCTATGTTCTTAAATGGAATTACACCTATGAAAATGTG ACTTTTCAAGCTCAGTGGCTCCATGCCTTTTTAAAAAAGATTCCTGAGGACCATTCAGAC AAGTGGAAACAAATACCAAACTGTGAAAATGTCAAAACGACCCATTGTGTCTTTCCTCAA AATGTTTTCACGAAAGGAATTTTCTTCATCCGTGTCCAAGCATCTAATGGAAATAGCACA TCTCTTTGGTCCGAAGAGAAGAGATTTAATACTGAAATGCAAACTATCCTGTTTCCTCCC GTCATCAACATGAAACCCATAAATGATGCTTCACTGCGTGTCGGTATCGGTGCTCCGAAA GAATCTGAGGACAAGTCTGTGAACCAGCTTTACCCACTAATTTATGAAGTTATTTTTAGA GAAAACACTTCAGATACTGAGAGAGACGTTCTAGAGAAGAGAACGGATTTTACTTTCTCT AACTTGAAACCACTGACTGTGTATTGTGTCAAAGCCAGAGCACTCATCGAGAATGACAGG TGGAATAGAAGCAGTGTTTTTAGTGACACTGTGTGCGAGAAAACCAAACCAGGAAGCACT TCCCAAGCCTGGCTTATAGCTGGAATTCTCTCGGCGATACTTTTGTTCCCTGCTGTTTTT TATGGTGTGAAAGTCGTCTCGCGATGTATCAATTATGTGTTCTTCCCATCAAGTAAACCT CCTTCCACTATAGATGAGTATTTCGCTGAACAGCCACTCAAGAATCTGCTTCTCTCCACC TCTGAAGAACAAACCGAAATATGTTTCATCGTTGAAAATACAAACACTATTACTACAATA GAAGAGACTGATCAAATTGATGACAATCACAGCAGATGCAGTTCTCAAACGAATCGGGAT TCAGGAGTCTATTCGAATGAAGATGAAAACAGTGGAAGCAAAATAGGAGAAGAAATTCTG CGACAGGCAGCCGTGTGACCAGAACGCTTTAAAATCTTGGGAAGTCTATGGAACTTAAAA GCAGGAGCCTGAGCTCCTTGCTTCTCTCAGTAACTCTTAAGAACGTATTTGCTTGTGGCG GAACAAAAAAGCACCTTCAGATCATCGGTCCTCAAAATACAGGCAAGCACTTAACTCTTT AAAAGGAATCTGGAAAAGAGTTTGCTGTATTCTTTTCTGTATGGAAAGTCTCGGCCAACC TGTCATTGGACCGGCCTTGGATGAGAGGCATTAAATCCCGAAGATGCCCTCCATCTTCCT GATGTCACCGCGGGTACCCTGGCACCTCTGGCTGAAGGCTGTGTTTGTGTCAGCCGGCCG ATAGCCTTGCGGTGCTGCTGCTGATGCCACGTGTGTCATTGGTCCCTTCTCCGTCCCAGC ATCACAGTGCATTATTCCTCCAGAGACACCCAGAACACTCAGTCTTTTTCTTGAACACTG AAGTGAGCCCTTTGGAAATGTCTTTAGAAAGGTCTGAATCCCAGCATCACATGGTTTTCT GAAAAGTAGCTCACTCTGGAAAACAGCCGCAGGTGCCAGAAACATGGTCCTTAACGATTT TTTTCAGGGAAATTCTATCCATTTATCCCAATTACATCAGTTTCTCCATCACAGTGACCT ATCCCTTCTACGATTTAGGATGAAAACCCCGTAATCTTTTCAGTACCCATACATTGAGAC TTCGTGGTTGAGGGAGTTCCCATCGTAGATCCGGGGAAAGGAATCTGACCAGCATCCGTG AGGACGCAGGTCTGATCCCTGGCCTCTCTCTCTCAGTGGGTTAAGGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGAGCGGCGCGAGGGGACAGGGCCGCACGGGTCCCAGGTCCCGGGGTGGCCTGTGCAC CCAAGTTTCCCTTGCGCCGCGCTTCCTGATGTGGCCGAAGACGTGATTGGAAGCGCCGGC GGCCGCCCGCGGACGATGCTCGGGTTTCTGGGTGCGACGACCCTGATGCTGGTCGCTGGG GCTCCGTGGGTGTTGCCCGCAGGGGGTGCAGATCTCAGATCTCCTGAAAATGTCGTGGTC TCTATCATTGATGACAACTTCATCCTGAAATGGAAGAGCAGCAGTGAATCCGTCAGCAAT GTGACTTTTTCAGCAGATTATCAAATAACAGGGATGGATAATTGGATAAAGTTGCCTGGA TGTCAATATGTTACTAGCACTGAATGCAACTTTTCTTCCATCAAGCTTAAAAGCGTGTAT GAAAAAATTAAATTGCGTATAAGAGCAGAAACAGGAAACAGCACTTCTCCGTGGTATGAG GTTGAGCCGTTTATACCATTTCAAGAAGCACAAATTGGCCCTCCAGATGTACATTTAGAA GCCGAAGATAAAGCAATAATAATAAACCTCTCTCCTCCTGGCACAAAAAACAGTGTCATG TGGGCTATGGATAGTTCAAGTTTCGTGTATAGCTTAGTTATCTGGAAAAACTCTTCAAGT CTAGAAGAAAGGACTAAAACTGTTTATGCCAGAGATAAAATTCACCAACTCTCACCAGAG ACAACTTACTGTTTAAAAGTTAAAGCCGGACTCCGTTCGCCAAGAAAAGTCGGTGTCTAC AGTCCAGTGTATTGTATAAATACCACAGTGAAACATCACCTGCCTTCACCAGAAAATCTA GAAATTAATGCTGAAAACCGGGTCTATGTTCTTAAATGGAATTACACCTATGAAAATGTG ACTTTTCAAGCTCAGTGGCTCCATGCCTTTTTAAAAAAGATTCCTGAGGACCATTCAGAC AAGTGGAAACAAATACCAAACTGTGAAAATGTCAAAACGACCCATTGTGTCTTTCCTCAA AATGTTTTCACGAAAGGAATTTTCTTCATCCGTGTCCAAGCATCTAATGGAAATAGCACA TCTCTTTGGTCCGAAGAGAAGAGATTTAATACTGAAATGCAAACTATCCTGTTTCCTCCC GTCATCAACATGAAACCCATAAATGATGCTTCACTGCGTGTCGGTATCGGTGCTCCGAAA GAATCTGAGGACAAGTCTGTGAACCAGCTTTACCCACTAATTTATGAAGTTATTTTTAGA GAAAACACTTCAGATACTGAGAGAGACGTTCTAGAGAAGAGAACGGATTTTACTTTCTCT AACTTGAAACCACTGACTGTGTATTGTGTCAAAGCCAGAGCACTCATCGAGAATGACAGG TGGAATAGAAGCAGTGTTTTTAGTGACACTGTGTGCGAGAAAACCAAACCAGGAAGCACT TCCCAAGCCTGGCTTATAGCTGGAATTCTCTCGGCGATACTTTTGTTCCCTGCTGTTTTT TATGGTGTGAAAGTCGTCTCGCGATGTATCAATTATGTGTTCTTCCCATCAAGTAAACCT CCTTCCACTATAGATGAGTATTTCGCTGAACAGCCACTCAAGAATCTGCTTCTCTCCACC TCTGAAGAACAAACCGAAATATGTTTCATCGTTGAAAATACAAACACTATTACTACAATA GAAGAGACTGATCAAATTGATGACAATCACAGCAGATGCAGTTCTCAAACGAATCGGGAT TCAGGAGTCTATTCGAATGAAGATGAAAACAGTGGAAGCAAAATAGGAGAAGAAATTCTG CGACAGGCAGCCGTGTGACCAGAACGCTTTAAAATCTTGGGAAGTCTATGGAACTTAAAA GCAGGAGCCTGAGCTCCTTGCTTCTCTCAGTAACTCTTAAGAACGTATTTGCTTGTGGCG GAACAAAAAAGCACCTTCAGATCATCGGTCCTCAAAATACAGGCAAGCACTTAACTCTTT AAAAGGAATCTGGAAAAGAGTTTGCTGTATTCTTTTCTGTATGGAAAGTCTCGGCCAACC TGTCATTGGACCGGCCTTGGATGAGAGGCATTAAATCCCGAAGATGCCCTCCATCTTCCT GATGTCACCGCGGGTACCCTGGCACCTCTGGCTGAAGGCTGTGTTTGTGTCAGCCGGCCG ATAGCCTTGCGGTGCTGCTGCTGATGCCACGTGTGTCATTGGTCCCTTCTCCGTCCCAGC ATCACAGTGCATTATTCCTCCAGAGACACCCAGAACACTCAGTCTTTTTCTTGAACACTG AAGTGAGCCCTTTGGAAATGTCTTTAGAAAGGTCTGAATCCCAGCATCACATGGTTTTCT GAAAAGTAGCTCACTCTGGAAAACAGCCGCAGGTGCCAGAAACATGGTCCTTAACGATTT TTTTCAGGGAAATTCTATCCATTTATCCCAATTACATCAGTTTCTCCATCACAGTGACCT ATCCCTTCTACGATTTAGGATGAAAACCCCGTAATCTTTTCAGTACCCATACATTGAGAC TTCGTGGTTGAGGGAGTTCCCATCGTAGATCCGGGGAAAGGAATCTGACCAGCATCCGTG AGGACGCAGGTCTGATCCCTGGCCTCTCTCTCTCAGTGGGTTAAGGAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
| 200-326, gnl|bosTau2|chr1 (1073949-1074072) | |
| 200-326, gnl|canFam2|chr31 (30978640-30978985) | |
| 200-326, gnl|dasNov1|scaffold_289278 (542-904) | |
| 200-326, gnl|echTel1|scaffold_287613 (61796-61459) | |
| 200-326, gnl|hg17|chr21 (33629639-33629981) | |
| 200-326, gnl|Hg17|chr21 (33629697-33629823) | |
| 200-326, gnl|mm7|chr16 (91520004-91520314) | |
| 200-326, gnl|Mm7|chr16 (91540039-91540165) | |
| 200-326, gnl|monDom2|scaffold_29 (14458043-14457700) | |
| 200-326, gnl|oryCun1|scaffold_194610 (40496-40155) | |
| 200-326, gnl|panTro1|chr22 (33606305-33606647) | |
| 200-326, gnl|rheMac2|chr3 (13224080-13223741) | |
| 200-326, gnl|rn3|chr11 (31499797-31500130) | |
| 330-508, gnl|bosTau2|chr1 (1081546-1081724) | |
| 330-508, gnl|Hg17|chr21 (33635178-33635350) | |
| 330-508, gnl|Mm7|chr16 (91542980-91543155) | |
| 662-808, gnl|bosTau2|chr1 (1084249-1084395) | |
| 662-808, gnl|canFam2|chr31 (30982187-30982680) | |
| 662-808, gnl|dasNov1|scaffold_10658 (5520-6007) | |
| 662-808, gnl|echTel1|scaffold_287613 (56654-56176) | |
| 662-808, gnl|hg17|chr21 (33637382-33637863) | |
| 662-808, gnl|Hg17|chr21 (33637706-33637852) | |
| 662-808, gnl|loxAfr1|scaffold_5030 (33918-33443) | |
| 662-808, gnl|mm7|chr16 (91545434-91545889) | |
| 662-808, gnl|Mm7|chr16 (91545732-91545878) | |
| 662-808, gnl|monDom2|scaffold_29 (14453537-14453030) | |
| 662-808, gnl|oryCun1|scaffold_194610 (33577-33130) | |
| 662-808, gnl|panTro1|chr22 (33614103-33614587) | |
| 662-808, gnl|rheMac2|chr3 (13219201-13218712) | |
| 662-808, gnl|rn3|chr11 (31506484-31506936) | |
| 924-1126, gnl|bosTau2|chr1 (1088866-1089068) | |
| 924-1126, gnl|canFam2|chr31 (30986837-30987063) | |
| 924-1126, gnl|dasNov1|scaffold_10658 (10391-10616) | |
| 924-1126, gnl|echTel1|scaffold_287613 (53037-52812) | |
| 924-1126, gnl|hg17|chr21 (33643244-33643477) | |
| 924-1126, gnl|Hg17|chr21 (33643267-33643469) | |
| 924-1126, gnl|loxAfr1|scaffold_5030 (31500-31268) | |
| 924-1126, gnl|mm7|chr16 (91549724-91549958) | |
| 924-1126, gnl|Mm7|chr16 (91549750-91549952) | |
| 924-1126, gnl|monDom2|scaffold_29 (14440074-14439834) | |
| 924-1126, gnl|oryCun1|scaffold_194610 (28988-28767) | |
| 924-1126, gnl|panTro1|chr22 (33619961-33620194) | |
| 924-1126, gnl|rheMac2|chr3 (13213303-13213070) | |
| 924-1126, gnl|rn3|chr11 (31510255-31510488) | |
| 1280-1433, gnl|bosTau2|chr1 (1092670-1092823) | |
| 1280-1433, gnl|canFam2|chr31 (30989334-30989609) | |
| 1280-1433, gnl|dasNov1|scaffold_10658 (14316-14646) | |
| 1280-1433, gnl|echTel1|scaffold_287613 (50705-50393) | |
| 1280-1433, gnl|hg17|chr21 (33646927-33647242) | |
| 1280-1433, gnl|Hg17|chr21 (33646933-33647085) | |
| 1280-1433, gnl|loxAfr1|scaffold_5030 (27958-27705) | |
| 1280-1433, gnl|mm7|chr16 (91551961-91552250) | |
| 1280-1433, gnl|Mm7|chr16 (91551966-91552116) | |
| 1280-1433, gnl|monDom2|scaffold_29 (14438342-14438049) | |
| 1280-1433, gnl|oryCun1|scaffold_194610 (26548-26231) | |
| 1280-1433, gnl|panTro1|chr22 (33623643-33623958) | |
| 1280-1433, gnl|rheMac2|chr3 (13209074-13208762) | |
| 1280-1433, gnl|rn3|chr11 (31512719-31513018) | |
| 2179-2437, gnl|bosTau2|chr14 (30143147-30142899) | |
| 2179-2437, gnl|Hg17|chr21 (33650406-33650659) |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 200-326, gnl|bosTau2|chr1 (1073949-1074072) | |
| 200-326, gnl|canFam2|chr31 (30978640-30978985) | |
| 200-326, gnl|dasNov1|scaffold_289278 (542-904) | |
| 200-326, gnl|echTel1|scaffold_287613 (61796-61459) | |
| 200-326, gnl|hg17|chr21 (33629639-33629981) | |
| 200-326, gnl|Hg17|chr21 (33629697-33629823) | |
| 200-326, gnl|mm7|chr16 (91520004-91520314) | |
| 200-326, gnl|Mm7|chr16 (91540039-91540165) | |
| 200-326, gnl|monDom2|scaffold_29 (14458043-14457700) | |
| 200-326, gnl|oryCun1|scaffold_194610 (40496-40155) | |
| 200-326, gnl|panTro1|chr22 (33606305-33606647) | |
| 200-326, gnl|rheMac2|chr3 (13224080-13223741) | |
| 200-326, gnl|rn3|chr11 (31499797-31500130) | |
| 330-508, gnl|bosTau2|chr1 (1081546-1081724) | |
| 330-508, gnl|Hg17|chr21 (33635178-33635350) | |
| 330-508, gnl|Mm7|chr16 (91542980-91543155) | |
| 662-808, gnl|bosTau2|chr1 (1084249-1084395) | |
| 662-808, gnl|canFam2|chr31 (30982187-30982680) | |
| 662-808, gnl|dasNov1|scaffold_10658 (5520-6007) | |
| 662-808, gnl|echTel1|scaffold_287613 (56654-56176) | |
| 662-808, gnl|hg17|chr21 (33637382-33637863) | |
| 662-808, gnl|Hg17|chr21 (33637706-33637852) | |
| 662-808, gnl|loxAfr1|scaffold_5030 (33918-33443) | |
| 662-808, gnl|mm7|chr16 (91545434-91545889) | |
| 662-808, gnl|Mm7|chr16 (91545732-91545878) | |
| 662-808, gnl|monDom2|scaffold_29 (14453537-14453030) | |
| 662-808, gnl|oryCun1|scaffold_194610 (33577-33130) | |
| 662-808, gnl|panTro1|chr22 (33614103-33614587) | |
| 662-808, gnl|rheMac2|chr3 (13219201-13218712) | |
| 662-808, gnl|rn3|chr11 (31506484-31506936) | |
| 924-1126, gnl|bosTau2|chr1 (1088866-1089068) | |
| 924-1126, gnl|canFam2|chr31 (30986837-30987063) | |
| 924-1126, gnl|dasNov1|scaffold_10658 (10391-10616) | |
| 924-1126, gnl|echTel1|scaffold_287613 (53037-52812) | |
| 924-1126, gnl|hg17|chr21 (33643244-33643477) | |
| 924-1126, gnl|Hg17|chr21 (33643267-33643469) | |
| 924-1126, gnl|loxAfr1|scaffold_5030 (31500-31268) | |
| 924-1126, gnl|mm7|chr16 (91549724-91549958) | |
| 924-1126, gnl|Mm7|chr16 (91549750-91549952) | |
| 924-1126, gnl|monDom2|scaffold_29 (14440074-14439834) | |
| 924-1126, gnl|oryCun1|scaffold_194610 (28988-28767) | |
| 924-1126, gnl|panTro1|chr22 (33619961-33620194) | |
| 924-1126, gnl|rheMac2|chr3 (13213303-13213070) | |
| 924-1126, gnl|rn3|chr11 (31510255-31510488) | |
| 1280-1433, gnl|bosTau2|chr1 (1092670-1092823) | |
| 1280-1433, gnl|canFam2|chr31 (30989334-30989609) | |
| 1280-1433, gnl|dasNov1|scaffold_10658 (14316-14646) | |
| 1280-1433, gnl|echTel1|scaffold_287613 (50705-50393) | |
| 1280-1433, gnl|hg17|chr21 (33646927-33647242) | |
| 1280-1433, gnl|Hg17|chr21 (33646933-33647085) | |
| 1280-1433, gnl|loxAfr1|scaffold_5030 (27958-27705) | |
| 1280-1433, gnl|mm7|chr16 (91551961-91552250) | |
| 1280-1433, gnl|Mm7|chr16 (91551966-91552116) | |
| 1280-1433, gnl|monDom2|scaffold_29 (14438342-14438049) | |
| 1280-1433, gnl|oryCun1|scaffold_194610 (26548-26231) | |
| 1280-1433, gnl|panTro1|chr22 (33623643-33623958) | |
| 1280-1433, gnl|rheMac2|chr3 (13209074-13208762) | |
| 1280-1433, gnl|rn3|chr11 (31512719-31513018) | |
| 2179-2437, gnl|bosTau2|chr14 (30143147-30142899) | |
| 2179-2437, gnl|Hg17|chr21 (33650406-33650659) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| cbl (0.344392) | |
| cty (0.31224) | |
| eep (0.245128) | |
| clu (0.239292) | |
| tbr (0.154178) | |
| jej (0.0989218) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.344392) | |
| cty (0.31224) | |
| eep (0.245128) | |
| clu (0.239292) | |
| tbr (0.154178) | |
| jej (0.0989218) |