Ss1.1-Tes1-TES01F120056.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGAGCGGTTGAGAGTACGGACAGCTGAGGCGATGGCGGACAGCCACAGCCCGGACAGC GAGCCTACGACGCGCACGCTGCTACGGCGCGTGCTGGATACAGCGGATCCGCGCACCCCG CGGCGACCCCGAAGTGCTCGGATTGGTGCTCAGATATCCCCGCTTGAAACATCTTCCTCT AGGAGGCTGAGGAGCCAAACAAAGATGTCTGCCAGGCGTCGATCTCATAGAATCAGGTCT ATTGACAGATTGGCCCATATTCAAGCCAGTGGACACCTGGAGGAACAAACACCCCGAACT CTGCTGAAGAACATCTTACTAACTGCCCCAGAATCTTCCACTGTGATGCCGGAGTCTGTG ATGAAGCCACTGACGGTGCCACAGATGGTCCAGCCTTCCAGACGGGAAAGCAGTTGGAGC AGCCTAGAGCTGCAGCTTCCTGAACTTGAACCCCCCACAACCCTGGCTCCAGGTCTGCTG GCTTCTGGCAGAAGGAAACAGAAGCTAAGGTTGTCAGTGTTTCAACAAGGAATGGACCAG GAGCTGCCTCTCTCTCAAGAGTCTCGTGGGAATGCTGATGCCTCTTCACTCACCAGCTCC CTCAACCTGACCTTTGCCACACCTCTCCAGCCACTGTCAGTGAAGAGGCCTGGTTTGGCC CGCAGACCCCTCACCCGACGTGCTGTAGATGTGGGTACATTTTTCCAGGATCTGCGAGAT ACTTCTGTGGCCTTGCCTCCTCCAGACACAGTGTTGGAGGACACCCAGCCGTTCTCCCAG CCCTTGGCTGGCAATACTTAAATGTCTTTGGATTGTTATTTTAGTGTCTAGAATGAATAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGAGCGGTTGAGAGTACGGACAGCTGAGGCGATGGCGGACAGCCACAGCCCGGACAGC GAGCCTACGACGCGCACGCTGCTACGGCGCGTGCTGGATACAGCGGATCCGCGCACCCCG CGGCGACCCCGAAGTGCTCGGATTGGTGCTCAGATATCCCCGCTTGAAACATCTTCCTCT AGGAGGCTGAGGAGCCAAACAAAGATGTCTGCCAGGCGTCGATCTCATAGAATCAGGTCT ATTGACAGATTGGCCCATATTCAAGCCAGTGGACACCTGGAGGAACAAACACCCCGAACT CTGCTGAAGAACATCTTACTAACTGCCCCAGAATCTTCCACTGTGATGCCGGAGTCTGTG ATGAAGCCACTGACGGTGCCACAGATGGTCCAGCCTTCCAGACGGGAAAGCAGTTGGAGC AGCCTAGAGCTGCAGCTTCCTGAACTTGAACCCCCCACAACCCTGGCTCCAGGTCTGCTG GCTTCTGGCAGAAGGAAACAGAAGCTAAGGTTGTCAGTGTTTCAACAAGGAATGGACCAG GAGCTGCCTCTCTCTCAAGAGTCTCGTGGGAATGCTGATGCCTCTTCACTCACCAGCTCC CTCAACCTGACCTTTGCCACACCTCTCCAGCCACTGTCAGTGAAGAGGCCTGGTTTGGCC CGCAGACCCCTCACCCGACGTGCTGTAGATGTGGGTACATTTTTCCAGGATCTGCGAGAT ACTTCTGTGGCCTTGCCTCCTCCAGACACAGTGTTGGAGGACACCCAGCCGTTCTCCCAG CCCTTGGCTGGCAATACTTAAATGTCTTTGGATTGTTATTTTAGTGTCTAGAATGAATAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 5-146, gnl|bosTau2|chr18 (15012189-15012329) | |
| 5-146, gnl|canFam2|chr5 (84649317-84649132) | |
| 5-146, gnl|echTel1|scaffold_310190 (75870-75665) | |
| 5-146, gnl|hg17|chr16 (66425137-66425320) | |
| 5-146, gnl|Hg17|chr16 (66425292-66425154) | |
| 5-146, gnl|mm7|chr8 (104450709-104450894) | |
| 5-146, gnl|Mm7|chr8 (104450866-104450726) | |
| 5-146, gnl|monDom2|scaffold_23 (18450101-18449917) | |
| 5-146, gnl|panTro1|chr18 (60721776-60721959) | |
| 5-146, gnl|rheMac2|chr20 (66162762-66162945) | |
| 5-146, gnl|rn3|chr19 (35691200-35691385) | |
| 421-544, gnl|bosTau2|chr18 (15014298-15014421) | |
| 421-544, gnl|canFam2|chr5 (84651484-84650793) | |
| 421-544, gnl|dasNov1|scaffold_63314 (5311-4597) | |
| 421-544, gnl|echTel1|scaffold_310190 (77895-77180) | |
| 421-544, gnl|hg17|chr16 (66422822-66423535) | |
| 421-544, gnl|Hg17|chr16 (66423296-66423173) | |
| 421-544, gnl|mm7|chr8 (104447806-104448399) | |
| 421-544, gnl|Mm7|chr8 (104448180-104448054) | |
| 421-544, gnl|monDom2|scaffold_23 (18454867-18454060) | |
| 421-544, gnl|oryCun1|scaffold_204307 (133482-132875) | |
| 421-544, gnl|panTro1|chr18 (60719526-60720239) | |
| 421-544, gnl|rheMac2|chr20 (66160569-66161273) | |
| 421-544, gnl|rn3|chr19 (35688618-35689206) | |
| 591-745, gnl|bosTau2|chr18 (15014788-15014942) | |
| 591-745, gnl|canFam2|chr5 (84651690-84651537) | |
| 591-745, gnl|hg17|chr16 (66422613-66422766) | |
| 591-745, gnl|Hg17|chr16 (66422768-66422620) | |
| 591-745, gnl|mm7|chr8 (104447599-104447758) | |
| 591-745, gnl|Mm7|chr8 (104447760-104447606) | |
| 591-745, gnl|monDom2|scaffold_23 (18455097-18454941) | |
| 591-745, gnl|oryCun1|scaffold_204307 (133708-133555) | |
| 591-745, gnl|panTro1|chr18 (60719317-60719470) | |
| 591-745, gnl|rn3|chr19 (35688411-35688570) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-146, gnl|bosTau2|chr18 (15012189-15012329) | |
| 5-146, gnl|canFam2|chr5 (84649317-84649132) | |
| 5-146, gnl|echTel1|scaffold_310190 (75870-75665) | |
| 5-146, gnl|hg17|chr16 (66425137-66425320) | |
| 5-146, gnl|Hg17|chr16 (66425292-66425154) | |
| 5-146, gnl|mm7|chr8 (104450709-104450894) | |
| 5-146, gnl|Mm7|chr8 (104450866-104450726) | |
| 5-146, gnl|monDom2|scaffold_23 (18450101-18449917) | |
| 5-146, gnl|panTro1|chr18 (60721776-60721959) | |
| 5-146, gnl|rheMac2|chr20 (66162762-66162945) | |
| 5-146, gnl|rn3|chr19 (35691200-35691385) | |
| 421-544, gnl|bosTau2|chr18 (15014298-15014421) | |
| 421-544, gnl|canFam2|chr5 (84651484-84650793) | |
| 421-544, gnl|dasNov1|scaffold_63314 (5311-4597) | |
| 421-544, gnl|echTel1|scaffold_310190 (77895-77180) | |
| 421-544, gnl|hg17|chr16 (66422822-66423535) | |
| 421-544, gnl|Hg17|chr16 (66423296-66423173) | |
| 421-544, gnl|mm7|chr8 (104447806-104448399) | |
| 421-544, gnl|Mm7|chr8 (104448180-104448054) | |
| 421-544, gnl|monDom2|scaffold_23 (18454867-18454060) | |
| 421-544, gnl|oryCun1|scaffold_204307 (133482-132875) | |
| 421-544, gnl|panTro1|chr18 (60719526-60720239) | |
| 421-544, gnl|rheMac2|chr20 (66160569-66161273) | |
| 421-544, gnl|rn3|chr19 (35688618-35689206) | |
| 591-745, gnl|bosTau2|chr18 (15014788-15014942) | |
| 591-745, gnl|canFam2|chr5 (84651690-84651537) | |
| 591-745, gnl|hg17|chr16 (66422613-66422766) | |
| 591-745, gnl|Hg17|chr16 (66422768-66422620) | |
| 591-745, gnl|mm7|chr8 (104447599-104447758) | |
| 591-745, gnl|Mm7|chr8 (104447760-104447606) | |
| 591-745, gnl|monDom2|scaffold_23 (18455097-18454941) | |
| 591-745, gnl|oryCun1|scaffold_204307 (133708-133555) | |
| 591-745, gnl|panTro1|chr18 (60719317-60719470) | |
| 591-745, gnl|rn3|chr19 (35688411-35688570) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |