Ss1.1-Tes1-TES01F120103.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTCCCCACGCGCGGCCCCGCCAGCGCAAGGTCTGGGCAGGAAGGGGCGGGCCCTGCTT CGCGGCTTTGCTGGGGCCCGCGTTGCCATAGCGACCCTGGTCAGGCTCCGGACGCCAGTG CGCGCGCAGCGGGCGGCAATTGAGGCTGGAGGCAGTAACCTGCGACTCTGCTCTCCAACC GGCAGGAGAGCGCAGCCTCTGGTCCAAGAGTAGCAGCCAAATGCCTATCTCCAAGTGCCC GAAAAAGTCGGATCCCCTGTGGAAAGAGTGGGACCAGAAGTCCCAGAAGAATGGACTGAG GCACCAGGTGTATGCTGTCAATGGCGACCACTATGTGGGAGAGTGGAAGGACAACATGAA ACACGGGAAAGGAACACAGGTCTGGAAGAAGAAAGGAGCCATCTATGAAGGGGACTGGAA GTTTGGGAAGCGAGATGGCTATGGCACGCTCAGCCTTCCTGACCAAAAGACCGGAAAGCA CAGGAGAGTCTACTCAGGCTGGTGGAGAGGCGATAAGAAATCTGGCTATGGGATCCAGTT TTTCGGACCCAAGGCGTATTACGAGGGTGACTGGTGTGGCAACCAGCGCAGCGGGTGGGG CCGCATGTACTACAGCAATGGCGACATCTACGAAGGCCAGTGGTGTAACGACAAGCCAGA CGGGGAGGGCATGTTACGCCTGAAGAACGGGAACCGCTATGAAGGCTACTGGGAGAGAGG CATGAAGAATGGGTTGGGGCGTTTCTTCCACCTGGACCATGGTCAGCTGTTTGAAGGCTT CTGGGTCGACAGTGTGGCCAAGTGTGGCACAATGATTGACTTTGGCCGTGATGAAGCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTCCCCACGCGCGGCCCCGCCAGCGCAAGGTCTGGGCAGGAAGGGGCGGGCCCTGCTT CGCGGCTTTGCTGGGGCCCGCGTTGCCATAGCGACCCTGGTCAGGCTCCGGACGCCAGTG CGCGCGCAGCGGGCGGCAATTGAGGCTGGAGGCAGTAACCTGCGACTCTGCTCTCCAACC GGCAGGAGAGCGCAGCCTCTGGTCCAAGAGTAGCAGCCAAATGCCTATCTCCAAGTGCCC GAAAAAGTCGGATCCCCTGTGGAAAGAGTGGGACCAGAAGTCCCAGAAGAATGGACTGAG GCACCAGGTGTATGCTGTCAATGGCGACCACTATGTGGGAGAGTGGAAGGACAACATGAA ACACGGGAAAGGAACACAGGTCTGGAAGAAGAAAGGAGCCATCTATGAAGGGGACTGGAA GTTTGGGAAGCGAGATGGCTATGGCACGCTCAGCCTTCCTGACCAAAAGACCGGAAAGCA CAGGAGAGTCTACTCAGGCTGGTGGAGAGGCGATAAGAAATCTGGCTATGGGATCCAGTT TTTCGGACCCAAGGCGTATTACGAGGGTGACTGGTGTGGCAACCAGCGCAGCGGGTGGGG CCGCATGTACTACAGCAATGGCGACATCTACGAAGGCCAGTGGTGTAACGACAAGCCAGA CGGGGAGGGCATGTTACGCCTGAAGAACGGGAACCGCTATGAAGGCTACTGGGAGAGAGG CATGAAGAATGGGTTGGGGCGTTTCTTCCACCTGGACCATGGTCAGCTGTTTGAAGGCTT CTGGGTCGACAGTGTGGCCAAGTGTGGCACAATGATTGACTTTGGCCGTGATGAAGCCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 2-166, gnl|bosTau2|chr17 (28635984-28635821) | |
| 2-166, gnl|dasNov1|scaffold_66533 (5705-5858) | |
| 2-166, gnl|hg17|chr12 (120573115-120573333) | |
| 2-166, gnl|mm7|chr5 (122279804-122280000) | |
| 2-166, gnl|oryCun1|scaffold_99730 (4255-4065) | |
| 2-166, gnl|panTro1|chr10 (123647742-123647960) | |
| 2-166, gnl|rheMac2|chr11 (122761514-122761731) | |
| 196-369, gnl|bosTau2|chr17 (28633526-28633352) | |
| 196-369, gnl|Hg17|chr12 (120570148-120569961) | |
| 196-369, gnl|Mm7|chr5 (122277347-122277160) | |
| 524-683, gnl|bosTau2|chr17 (28600749-28600590) | |
| 524-683, gnl|canFam2|chr26 (10592985-10592874) | |
| 524-683, gnl|danRer3|chr10 (36309652-36309553) | |
| 524-683, gnl|echTel1|scaffold_19146 (3821-3919) | |
| 524-683, gnl|fr1|chrUn (42029187-42029289) | |
| 524-683, gnl|galGal2|chr15 (5552219-5552329) | |
| 524-683, gnl|hg17|chr12 (120554887-120554998) | |
| 524-683, gnl|Hg17|chr12 (120555059-120554900) | |
| 524-683, gnl|loxAfr1|scaffold_7333 (52249-52138) | |
| 524-683, gnl|mm7|chr5 (122273466-122273577) | |
| 524-683, gnl|Mm7|chr5 (122273638-122273479) | |
| 524-683, gnl|monDom2|scaffold_97 (1818501-1818621) | |
| 524-683, gnl|oryCun1|scaffold_144470 (5394-5283) | |
| 524-683, gnl|panTro1|chrUn_random (16806578-16806689) | |
| 524-683, gnl|rn3|chr12 (11016659-11016715) | |
| 524-683, gnl|tetNig1|chr4 (1613786-1613684) | |
| 684-840, gnl|bosTau2|chr17 (28597990-28597834) | |
| 684-840, gnl|Hg17|chr12 (120553885-120553729) | |
| 684-840, gnl|Mm7|chr5 (122272082-122271926) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-166, gnl|bosTau2|chr17 (28635984-28635821) | |
| 2-166, gnl|dasNov1|scaffold_66533 (5705-5858) | |
| 2-166, gnl|hg17|chr12 (120573115-120573333) | |
| 2-166, gnl|mm7|chr5 (122279804-122280000) | |
| 2-166, gnl|oryCun1|scaffold_99730 (4255-4065) | |
| 2-166, gnl|panTro1|chr10 (123647742-123647960) | |
| 2-166, gnl|rheMac2|chr11 (122761514-122761731) | |
| 196-369, gnl|bosTau2|chr17 (28633526-28633352) | |
| 196-369, gnl|Hg17|chr12 (120570148-120569961) | |
| 196-369, gnl|Mm7|chr5 (122277347-122277160) | |
| 524-683, gnl|bosTau2|chr17 (28600749-28600590) | |
| 524-683, gnl|canFam2|chr26 (10592985-10592874) | |
| 524-683, gnl|danRer3|chr10 (36309652-36309553) | |
| 524-683, gnl|echTel1|scaffold_19146 (3821-3919) | |
| 524-683, gnl|fr1|chrUn (42029187-42029289) | |
| 524-683, gnl|galGal2|chr15 (5552219-5552329) | |
| 524-683, gnl|hg17|chr12 (120554887-120554998) | |
| 524-683, gnl|Hg17|chr12 (120555059-120554900) | |
| 524-683, gnl|loxAfr1|scaffold_7333 (52249-52138) | |
| 524-683, gnl|mm7|chr5 (122273466-122273577) | |
| 524-683, gnl|Mm7|chr5 (122273638-122273479) | |
| 524-683, gnl|monDom2|scaffold_97 (1818501-1818621) | |
| 524-683, gnl|oryCun1|scaffold_144470 (5394-5283) | |
| 524-683, gnl|panTro1|chrUn_random (16806578-16806689) | |
| 524-683, gnl|rn3|chr12 (11016659-11016715) | |
| 524-683, gnl|tetNig1|chr4 (1613786-1613684) | |
| 684-840, gnl|bosTau2|chr17 (28597990-28597834) | |
| 684-840, gnl|Hg17|chr12 (120553885-120553729) | |
| 684-840, gnl|Mm7|chr5 (122272082-122271926) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |