Ss1.1-Tes1-TES01G040004.5
|
AACAACCTGTGGGTGGGCGTGGCCGACGTGGGCGAGCTGCCGACTAGCGGGTCCTGCAGG
GCCGCCCGCGCACTTCCTGGTGTCACCCGCAGAGGGCGTCTGTCGCCGCGCCGCCTGGAG
AGTCTCGAGGCCGGAAGCCGTCCGGCGCCGCCCCGCTCGCCCCAGCCGCCGCCATGAAGG
CCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATAAGTGCAA
TCGGACGGGGCATCTGTGTGCTGCTGGGTATTTCTCTGGAGGATACGCAGAAGGAACTGG
AGCACATGGTCCGGAAGATCCTAAACCTGCGTGTGTTTGAGGACGAGGGTGGGAGGCACT
GGGCGAAGAGCGTGATGGACAAGCAGTATGAGGTGCTGTGCGTCAGCCAGTTCACCCTGC
AGTGCGTCCTCAAGGGCAACAAGCCCGACTTCCACCTGGCGATGCCCTCGGAGCAGGCAG
AGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAGGCCTACAGGCCGGAGCTGATCA
AAGATGGCAAGTTTGGTGCCTACATGCAAGTCCACATTCAGAACGACGGGCCTGTGACCA
TAGAACTGGAATCGCCAGCTCCTGGTGCTGCCACCTCTGACCCTAAGCAGCTGTCCAAGC
TTGAGAAACAACAGCAGAGGAAAGAAAAGACCAGAGCCAAAGGGCCTTCCGAATCAAGCA
AAGAAAGAAGCACTCCTCGCAAAGAAGACCGCAGCGCCAGCAGCGGGGCTGAGGGTGACG
TGTCCTCGGAGCGGGAGCCGTAGGCCTGGGACGCTGCTCAGTGCATTATCATTGGGCAGA
ACTGGATCCTGAAAAATTCATGAAAGATACTAGGCACCTACACTACTTTAAGGATTTGGA
ACTGAATCCTGAAAAGGAAGATGGAAATAAGAAACTGGGAACCTGAATAGCCCTGCAAAA
AACAAAAGCAAAACAAAACAAAACAAAAAACACCAAAGGAGCATTACCACTTTCTGCCGT
TGCTGTGGTTTAATACAGGAAGTGGGTGCTGCCTACCCCCTCTCCCCGAGAAAGGCTGTG
TTGGTTCCTATGATATTTTGGCTTCTTTCAAAACAGGCTGGCCCAGCATCATTCGTCACT
GAGTCCTCCTTTCACAGTGTGGTTGGTGTATTTCTGCGTGTCTCTGACGGGTCCCAAATG
CATTCATCCTCTCCATGTTTTTCCCAACACTGGCTCAGCCAGGGCACATGTTAAGATGTA
GAGAGAACAGTCATCACTGATAATGTATTATGTGAGACCTTTGCATCTTGTAAATTTTCT
CTCTTTTTTCTAAAAAAGAAATAAACTCCAACGCTCAACAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AACAACCTGTGGGTGGGCGTGGCCGACGTGGGCGAGCTGCCGACTAGCGGGTCCTGCAGG
GCCGCCCGCGCACTTCCTGGTGTCACCCGCAGAGGGCGTCTGTCGCCGCGCCGCCTGGAG
AGTCTCGAGGCCGGAAGCCGTCCGGCGCCGCCCCGCTCGCCCCAGCCGCCGCCATGAAGG
CCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATAAGTGCAA
TCGGACGGGGCATCTGTGTGCTGCTGGGTATTTCTCTGGAGGATACGCAGAAGGAACTGG
AGCACATGGTCCGGAAGATCCTAAACCTGCGTGTGTTTGAGGACGAGGGTGGGAGGCACT
GGGCGAAGAGCGTGATGGACAAGCAGTATGAGGTGCTGTGCGTCAGCCAGTTCACCCTGC
AGTGCGTCCTCAAGGGCAACAAGCCCGACTTCCACCTGGCGATGCCCTCGGAGCAGGCAG
AGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAGGCCTACAGGCCGGAGCTGATCA
AAGATGGCAAGTTTGGTGCCTACATGCAAGTCCACATTCAGAACGACGGGCCTGTGACCA
TAGAACTGGAATCGCCAGCTCCTGGTGCTGCCACCTCTGACCCTAAGCAGCTGTCCAAGC
TTGAGAAACAACAGCAGAGGAAAGAAAAGACCAGAGCCAAAGGGCCTTCCGAATCAAGCA
AAGAAAGAAGCACTCCTCGCAAAGAAGACCGCAGCGCCAGCAGCGGGGCTGAGGGTGACG
TGTCCTCGGAGCGGGAGCCGTAGGCCTGGGACGCTGCTCAGTGCATTATCATTGGGCAGA
ACTGGATCCTGAAAAATTCATGAAAGATACTAGGCACCTACACTACTTTAAGGATTTGGA
ACTGAATCCTGAAAAGGAAGATGGAAATAAGAAACTGGGAACCTGAATAGCCCTGCAAAA
AACAAAAGCAAAACAAAACAAAACAAAAAACACCAAAGGAGCATTACCACTTTCTGCCGT
TGCTGTGGTTTAATACAGGAAGTGGGTGCTGCCTACCCCCTCTCCCCGAGAAAGGCTGTG
TTGGTTCCTATGATATTTTGGCTTCTTTCAAAACAGGCTGGCCCAGCATCATTCGTCACT
GAGTCCTCCTTTCACAGTGTGGTTGGTGTATTTCTGCGTGTCTCTGACGGGTCCCAAATG
CATTCATCCTCTCCATGTTTTTCCCAACACTGGCTCAGCCAGGGCACATGTTAAGATGTA
GAGAGAACAGTCATCACTGATAATGTATTATGTGAGACCTTTGCATCTTGTAAATTTTCT
CTCTTTTTTCTAAAAAAGAAATAAACTCCAACGCTCAACAAAAAAAAA
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|
gi|55957151|emb|CAI15669.1| |
Protein identifier
|
gi|55957151|emb|CAI15669.1| |
|
47-216, gnl|bosTau2|chr13 (24352394-24352568) |
|
47-216, gnl|Hg17|chr20 (18516578-18516759) |
|
47-216, gnl|Mm7|chr2 (144340756-144340948) |
| |
|
305-543, gnl|bosTau2|chr13 (24359904-24360142) |
|
305-543, gnl|Hg17|chr20 (18524645-18524885) |
|
305-543, gnl|Mm7|chr2 (144358044-144358284) |
| |
|
645-804, gnl|bosTau2|chr13 (24418493-24418652) |
|
645-804, gnl|Hg17|chr20 (18672741-18672901) |
|
645-804, gnl|Mm7|chr2 (144487752-144487911) |
| |
|
1075-1224, gnl|bosTau2|chr19 (39475695-39475840) |
|
1075-1224, gnl|Hg17|chr20 (18692269-18692408) |
|
1075-1224, gnl|Mm7|chr2 (144509319-144509472) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
47-216, gnl|bosTau2|chr13 (24352394-24352568) |
|
47-216, gnl|Hg17|chr20 (18516578-18516759) |
|
47-216, gnl|Mm7|chr2 (144340756-144340948) |
| |
|
305-543, gnl|bosTau2|chr13 (24359904-24360142) |
|
305-543, gnl|Hg17|chr20 (18524645-18524885) |
|
305-543, gnl|Mm7|chr2 (144358044-144358284) |
| |
|
645-804, gnl|bosTau2|chr13 (24418493-24418652) |
|
645-804, gnl|Hg17|chr20 (18672741-18672901) |
|
645-804, gnl|Mm7|chr2 (144487752-144487911) |
| |
|
1075-1224, gnl|bosTau2|chr19 (39475695-39475840) |
|
1075-1224, gnl|Hg17|chr20 (18692269-18692408) |
|
1075-1224, gnl|Mm7|chr2 (144509319-144509472) |
|
bla (0.497389) |
|
cga (0.279096) |
|
fce (0.271592) |
|
cly (0.241284) |
|
med (0.232504) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
nco (0.161734) |
|
hyp (0.142837) |
|
pty (0.142714) |
|
nca (0.136874) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
cov (0.132153) |
|
sug (0.127291) |
|
thg (0.126791) |
|
ese (0.126502) |
|
eep (0.122564) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
bla (0.497389) |
|
cga (0.279096) |
|
fce (0.271592) |
|
cly (0.241284) |
|
med (0.232504) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
nco (0.161734) |
|
hyp (0.142837) |
|
pty (0.142714) |
|
nca (0.136874) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
cov (0.132153) |
|
sug (0.127291) |
|
thg (0.126791) |
|
ese (0.126502) |
|
eep (0.122564) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
