Ss1.1-Tes1-TES01H080003.5
|
CCCTGTAGCATGCATGCTGTATCCTGTGAAATATGCCTGCAGAGACTTGAAAGAACTAGT
GGGACAGCAGTGAGTCGATTCCAGTTTCACTGTGGAAACATTGGCAGCTGACCCGGCCCC
GCCTATCTTTGGGGGTTGGTGGGGATAAAGTACACGTGGCCTGCAAACAAGAGAAGGAAA
GCAAGACAGAGTGAGCCCAGCCGGGGCTGTGGATAAAGATGGCACTCAGCCGTTGCGTGA
AGCTGAATGATGGGCACCTCATGCCCGTTCTTGGACTTGGCACTCTCGTCTCTGAAGGGG
TCCCTAAGAGCAAGGCTGGCGAGGCCACCAGAGTGGCTATCGAGGTAGGTTACCGTCACA
TTGATGCAGCCTACGTCTATGAAAACGAGGAGGAGGTGGGCAGCGCCCTGCGGGAGAAGA
TCGCGGATGGCACGGTGAAGAGGGAGGAGCTGTTCTACACCACCAAGCTTTGGGCTACTT
TCTTTCGACCTGAATTGGTTCGACCAGCCCTGGAAAGATCACTGAAGAAACTTCGGCTGG
ATTATGTTGATCTCTTCATTATTCACGTGCCAATCACGATGAAGCCTGGGGAGGAGCTTC
TGCCTAAGGATGCCAGTGGGAAAGTTATTTTTGATACGGTGGACCTGCGTGACACATGGG
CGGCTCTGGAGAAGTGTAAAGATGCAGGCTTGACCAAATCCATCGGGGTGTCCAATTTCA
ATCACAAGCAGCTGGAGATGATCCTGAACAAGCCAGGGCTCAAGTACAAGCCCGTCTGCA
ACCAGGTGGAATGCCACCCTTACCTCAATCAGAGCAAACTTCTGGAGTTTTGCAAGTCCA
AGGACATCGTTCTAGTTGCCTATAGTGCACTGGGATCCCAAAGAAACTCAAAGTGGGTGG
AAGAGAGCAACCCATATCTCTTAGAGGATCCAGTCTTAAATGCTATTGCCAAGAAACACA
ACAGAAGCCCAGCGCAGGTTGCCCTGCGCTACCAGCTGCAGCGGGGAGTGGTGGTCCTGG
CCAAGAGCTTCAATGAGCAGAGGATCAAAGAGAACTTCCAGGTTTTTGACTTTGAATTGC
CTCCAGAAGATATGAAAACAATCGATGGCCTCAACCAAAATTTAAGATATTTTAAGTTAC
TCTTTGCTGTCGATCACCCTTACTACCCCTATTCTGAAGAGTACTGAGCGGGAGCTCTCC
ATCGGGTGGGCTACCAGAACCTCTTGCTTCTCGGGCTGTGAAGAGGGTTTCTGTACTTGG
TAGAGGTGTTTAATAAAATAAATGTCTGAACTTCTGAAAAAAAAAAAATCCTTTAAAAAA
AAAACATTTTATGAAATAAAATCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCTGTAGCATGCATGCTGTATCCTGTGAAATATGCCTGCAGAGACTTGAAAGAACTAGT
GGGACAGCAGTGAGTCGATTCCAGTTTCACTGTGGAAACATTGGCAGCTGACCCGGCCCC
GCCTATCTTTGGGGGTTGGTGGGGATAAAGTACACGTGGCCTGCAAACAAGAGAAGGAAA
GCAAGACAGAGTGAGCCCAGCCGGGGCTGTGGATAAAGATGGCACTCAGCCGTTGCGTGA
AGCTGAATGATGGGCACCTCATGCCCGTTCTTGGACTTGGCACTCTCGTCTCTGAAGGGG
TCCCTAAGAGCAAGGCTGGCGAGGCCACCAGAGTGGCTATCGAGGTAGGTTACCGTCACA
TTGATGCAGCCTACGTCTATGAAAACGAGGAGGAGGTGGGCAGCGCCCTGCGGGAGAAGA
TCGCGGATGGCACGGTGAAGAGGGAGGAGCTGTTCTACACCACCAAGCTTTGGGCTACTT
TCTTTCGACCTGAATTGGTTCGACCAGCCCTGGAAAGATCACTGAAGAAACTTCGGCTGG
ATTATGTTGATCTCTTCATTATTCACGTGCCAATCACGATGAAGCCTGGGGAGGAGCTTC
TGCCTAAGGATGCCAGTGGGAAAGTTATTTTTGATACGGTGGACCTGCGTGACACATGGG
CGGCTCTGGAGAAGTGTAAAGATGCAGGCTTGACCAAATCCATCGGGGTGTCCAATTTCA
ATCACAAGCAGCTGGAGATGATCCTGAACAAGCCAGGGCTCAAGTACAAGCCCGTCTGCA
ACCAGGTGGAATGCCACCCTTACCTCAATCAGAGCAAACTTCTGGAGTTTTGCAAGTCCA
AGGACATCGTTCTAGTTGCCTATAGTGCACTGGGATCCCAAAGAAACTCAAAGTGGGTGG
AAGAGAGCAACCCATATCTCTTAGAGGATCCAGTCTTAAATGCTATTGCCAAGAAACACA
ACAGAAGCCCAGCGCAGGTTGCCCTGCGCTACCAGCTGCAGCGGGGAGTGGTGGTCCTGG
CCAAGAGCTTCAATGAGCAGAGGATCAAAGAGAACTTCCAGGTTTTTGACTTTGAATTGC
CTCCAGAAGATATGAAAACAATCGATGGCCTCAACCAAAATTTAAGATATTTTAAGTTAC
TCTTTGCTGTCGATCACCCTTACTACCCCTATTCTGAAGAGTACTGAGCGGGAGCTCTCC
ATCGGGTGGGCTACCAGAACCTCTTGCTTCTCGGGCTGTGAAGAGGGTTTCTGTACTTGG
TAGAGGTGTTTAATAAAATAAATGTCTGAACTTCTGAAAAAAAAAAAATCCTTTAAAAAA
AAAACATTTTATGAAATAAAATCT
|
|
gi|62663788|ref|XP_341551.2| |
Protein identifier
|
gi|62663788|ref|XP_341551.2| |
|
333-1099, gnl|bosTau2|chr26 (142128-142891) |
|
333-1099, gnl|Hg17|chr19 (38544093-38543331) |
|
333-1099, gnl|Mm7|chr12 (13517124-13516361) |
| |
|
466-584, gnl|bosTau2|chr13 (28843236-28843118) |
|
466-584, gnl|Hg17|chr10 (5129624-5129742) |
|
466-584, gnl|Mm7|chr13 (4121403-4121521) |
| |
|
662-788, gnl|bosTau2|chr13 (28841399-28841273) |
|
662-788, gnl|Hg17|chr10 (5131518-5131644) |
|
662-788, gnl|Mm7|chr13 (4123336-4123462) |
| |
|
895-1063, gnl|bosTau2|chr13 (31975778-31975610) |
|
895-1063, gnl|Hg17|chr10 (5134676-5134844) |
|
895-1063, gnl|Mm7|chr13 (4127295-4127463) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
333-1099, gnl|bosTau2|chr26 (142128-142891) |
|
333-1099, gnl|Hg17|chr19 (38544093-38543331) |
|
333-1099, gnl|Mm7|chr12 (13517124-13516361) |
| |
|
466-584, gnl|bosTau2|chr13 (28843236-28843118) |
|
466-584, gnl|Hg17|chr10 (5129624-5129742) |
|
466-584, gnl|Mm7|chr13 (4121403-4121521) |
| |
|
662-788, gnl|bosTau2|chr13 (28841399-28841273) |
|
662-788, gnl|Hg17|chr10 (5131518-5131644) |
|
662-788, gnl|Mm7|chr13 (4123336-4123462) |
| |
|
895-1063, gnl|bosTau2|chr13 (31975778-31975610) |
|
895-1063, gnl|Hg17|chr10 (5134676-5134844) |
|
895-1063, gnl|Mm7|chr13 (4127295-4127463) |
|
cov (2.5109) |
|
sug (1.65479) |
|
cag (1.51194) |
|
nlu (0.575043) |
|
fat (0.442282) |
|
nmm (0.398406) |
|
duo (0.345602) |
|
cki (0.330469) |
|
cje (0.330469) |
|
ssp (0.271039) |
|
ova (0.258264) |
|
cly (0.241284) |
|
mas (0.210305) |
|
tes (0.207814) |
|
fli (0.202881) |
|
sin (0.174948) |
|
cli (0.152812) |
|
ste (0.135208) |
|
ute (0.132784) |
|
ebs (0.118301) |
|
jca (0.11396) |
|
cov (2.5109) |
|
sug (1.65479) |
|
cag (1.51194) |
|
nlu (0.575043) |
|
fat (0.442282) |
|
nmm (0.398406) |
|
duo (0.345602) |
|
cki (0.330469) |
|
cje (0.330469) |
|
ssp (0.271039) |
|
ova (0.258264) |
|
cly (0.241284) |
|
mas (0.210305) |
|
tes (0.207814) |
|
fli (0.202881) |
|
sin (0.174948) |
|
cli (0.152812) |
|
ste (0.135208) |
|
ute (0.132784) |
|
ebs (0.118301) |
|
jca (0.11396) |
