Ss1.1-Thy1-THY010001G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCTGCTCTCCCCAGAGGCACAGGTGGAGTTCGGCGTCCAGCAGGAGATATCCCGGCTG ACTAACGAGAACCTGGACCTTAAAGAACTGGTGGAAAAGCTGGAAAAGAATGAGAAGAAG CTCAAAAAGCAATTAAAGATTTACATGAAGAAAGTCCAGGACCTGGAAGCTGCCCAGGCA CTGGCGCAGAGTGAGAAGAGGCGCCACGAGCTCAACAGGCAGGTCACCGTGCAGCGGAAA GAGAAGGACTTCCAGGGCATGTTGGAGTACCACAAGGAGGACGAGGCCCTGCTCGTTCGG AATCTGGTGACAGAGCTGAAGCCCCAGGCCCTGGCGGGCACAGTGCCCTGCCTCCCAGCC TACATCCTCTACATGTGTATCAGGCACGCGGACTACGTGAACGATGACCTCAAGGTGCAC TCCCTGCTGACCTCCACCATCAACGGCATCAAGAAAGTCCTCAAGAAGCACAATGATGAC TTTGAGATGACGTCATTCTGGTTATCCAATACCTGCCGCCTCCTGCATTGCTTGAAGCAG TACAGCGGCGATGAGGGCTTCATGACTCAGAACACCGCCAAGCAGAACGAGCACTGCCTT AAGAACTTTGACCTCACTGAATACCGCCAGGTGCTGAGCGACCTTTCCATTCAGATCTAC CAGCAGCTCATTAAAATCGCTGAGGGCCTGTTGCAGCCCATGATAGTGTCTGCCATGTTG GAGAATGAAAGCATTCAGGGTCTATCCGGTGTGAAGCCAACGGGCTACCGGAAGCGCTCC TCCAGCATGGCGGACGGGGATAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCTGCTCTCCCCAGAGGCACAGGTGGAGTTCGGCGTCCAGCAGGAGATATCCCGGCTG ACTAACGAGAACCTGGACCTTAAAGAACTGGTGGAAAAGCTGGAAAAGAATGAGAAGAAG CTCAAAAAGCAATTAAAGATTTACATGAAGAAAGTCCAGGACCTGGAAGCTGCCCAGGCA CTGGCGCAGAGTGAGAAGAGGCGCCACGAGCTCAACAGGCAGGTCACCGTGCAGCGGAAA GAGAAGGACTTCCAGGGCATGTTGGAGTACCACAAGGAGGACGAGGCCCTGCTCGTTCGG AATCTGGTGACAGAGCTGAAGCCCCAGGCCCTGGCGGGCACAGTGCCCTGCCTCCCAGCC TACATCCTCTACATGTGTATCAGGCACGCGGACTACGTGAACGATGACCTCAAGGTGCAC TCCCTGCTGACCTCCACCATCAACGGCATCAAGAAAGTCCTCAAGAAGCACAATGATGAC TTTGAGATGACGTCATTCTGGTTATCCAATACCTGCCGCCTCCTGCATTGCTTGAAGCAG TACAGCGGCGATGAGGGCTTCATGACTCAGAACACCGCCAAGCAGAACGAGCACTGCCTT AAGAACTTTGACCTCACTGAATACCGCCAGGTGCTGAGCGACCTTTCCATTCAGATCTAC CAGCAGCTCATTAAAATCGCTGAGGGCCTGTTGCAGCCCATGATAGTGTCTGCCATGTTG GAGAATGAAAGCATTCAGGGTCTATCCGGTGTGAAGCCAACGGGCTACCGGAAGCGCTCC TCCAGCATGGCGGACGGGGATAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 305-465, gnl|bosTau2|chr24 (39014978-39015138) | |
| 305-465, gnl|canFam2|chr7 (82041525-82041676) | |
| 305-465, gnl|danRer3|chr21 (15153742-15153591) | |
| 305-465, gnl|dasNov1|scaffold_67859 (47734-47885) | |
| 305-465, gnl|echTel1|scaffold_204022 (153-7) | |
| 305-465, gnl|fr1|chrUn (138643617-138643768) | |
| 305-465, gnl|galGal2|chr10 (9377551-9377705) | |
| 305-465, gnl|Hg17|chr18 (45623769-45623609) | |
| 305-465, gnl|hg17|chr9 (44315059-44315210) | |
| 305-465, gnl|loxAfr1|scaffold_14163 (26913-27059) | |
| 305-465, gnl|mm7|chr18 (75135773-75135924) | |
| 305-465, gnl|Mm7|chr18 (75135765-75135925) | |
| 305-465, gnl|monDom2|scaffold_58 (9923817-9923666) | |
| 305-465, gnl|oryCun1|scaffold_203510 (49482-49633) | |
| 305-465, gnl|panTro1|chrUn_random (3078994-3078843) | |
| 305-465, gnl|rheMac2|chr18 (42886749-42886598) | |
| 305-465, gnl|rn3|chr18 (71638258-71638409) | |
| 305-465, gnl|tetNig1|chr4 (5195180-5195331) | |
| 305-465, gnl|xenTro1|scaffold_175 (1795738-1795889) | |
| 554-706, gnl|bosTau2|chr24 (39018080-39018232) | |
| 554-706, gnl|canFam2|chr7 (82045434-82045253) | |
| 554-706, gnl|canFam2|chr7 (82045256-82045406) | |
| 554-706, gnl|danRer3|chr18 (41278397-41278579) | |
| 554-706, gnl|danRer3|chr21 (15150529-15150379) | |
| 554-706, gnl|dasNov1|scaffold_23276 (22342-22523) | |
| 554-706, gnl|dasNov1|scaffold_23276 (22520-22370) | |
| 554-706, gnl|echTel1|scaffold_111016 (643-485) | |
| 554-706, gnl|echTel1|scaffold_111016 (489-636) | |
| 554-706, gnl|fr1|chrUn (138644220-138644058) | |
| 554-706, gnl|fr1|chrUn (138644061-138644211) | |
| 554-706, gnl|galGal2|chr10 (9379455-9379283) | |
| 554-706, gnl|galGal2|chr10 (9379286-9379436) | |
| 554-706, gnl|hg17|chr18 (45619487-45619668) | |
| 554-706, gnl|Hg17|chr18 (45619664-45619512) | |
| 554-706, gnl|hg17|chr9 (44315301-44315451) | |
| 554-706, gnl|loxAfr1|scaffold_14163 (35076-34918) | |
| 554-706, gnl|loxAfr1|scaffold_14163 (34918-35050) | |
| 554-706, gnl|mm7|chr18 (75140088-75139917) | |
| 554-706, gnl|mm7|chr18 (75139920-75140070) | |
| 554-706, gnl|Mm7|chr18 (75139919-75140071) | |
| 554-706, gnl|monDom2|scaffold_58 (9918172-9918351) | |
| 554-706, gnl|monDom2|scaffold_58 (9918350-9918201) | |
| 554-706, gnl|oryCun1|scaffold_203510 (54207-54041) | |
| 554-706, gnl|oryCun1|scaffold_203510 (54044-54194) | |
| 554-706, gnl|panTro1|chr17 (42095901-42096082) | |
| 554-706, gnl|panTro1|chrUn_random (3078749-3078599) | |
| 554-706, gnl|rheMac2|chr18 (42882482-42882663) | |
| 554-706, gnl|rheMac2|chr18 (42882660-42882510) | |
| 554-706, gnl|rn3|chr18 (71642832-71642661) | |
| 554-706, gnl|rn3|chr18 (71642664-71642814) | |
| 554-706, gnl|tetNig1|chr4 (5195804-5195644) | |
| 554-706, gnl|tetNig1|chr4 (5195647-5195797) | |
| 554-706, gnl|xenTro1|scaffold_175 (1797883-1797719) | |
| 554-706, gnl|xenTro1|scaffold_175 (1797722-1797871) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 305-465, gnl|bosTau2|chr24 (39014978-39015138) | |
| 305-465, gnl|canFam2|chr7 (82041525-82041676) | |
| 305-465, gnl|danRer3|chr21 (15153742-15153591) | |
| 305-465, gnl|dasNov1|scaffold_67859 (47734-47885) | |
| 305-465, gnl|echTel1|scaffold_204022 (153-7) | |
| 305-465, gnl|fr1|chrUn (138643617-138643768) | |
| 305-465, gnl|galGal2|chr10 (9377551-9377705) | |
| 305-465, gnl|Hg17|chr18 (45623769-45623609) | |
| 305-465, gnl|hg17|chr9 (44315059-44315210) | |
| 305-465, gnl|loxAfr1|scaffold_14163 (26913-27059) | |
| 305-465, gnl|mm7|chr18 (75135773-75135924) | |
| 305-465, gnl|Mm7|chr18 (75135765-75135925) | |
| 305-465, gnl|monDom2|scaffold_58 (9923817-9923666) | |
| 305-465, gnl|oryCun1|scaffold_203510 (49482-49633) | |
| 305-465, gnl|panTro1|chrUn_random (3078994-3078843) | |
| 305-465, gnl|rheMac2|chr18 (42886749-42886598) | |
| 305-465, gnl|rn3|chr18 (71638258-71638409) | |
| 305-465, gnl|tetNig1|chr4 (5195180-5195331) | |
| 305-465, gnl|xenTro1|scaffold_175 (1795738-1795889) | |
| 554-706, gnl|bosTau2|chr24 (39018080-39018232) | |
| 554-706, gnl|canFam2|chr7 (82045434-82045253) | |
| 554-706, gnl|canFam2|chr7 (82045256-82045406) | |
| 554-706, gnl|danRer3|chr18 (41278397-41278579) | |
| 554-706, gnl|danRer3|chr21 (15150529-15150379) | |
| 554-706, gnl|dasNov1|scaffold_23276 (22342-22523) | |
| 554-706, gnl|dasNov1|scaffold_23276 (22520-22370) | |
| 554-706, gnl|echTel1|scaffold_111016 (643-485) | |
| 554-706, gnl|echTel1|scaffold_111016 (489-636) | |
| 554-706, gnl|fr1|chrUn (138644220-138644058) | |
| 554-706, gnl|fr1|chrUn (138644061-138644211) | |
| 554-706, gnl|galGal2|chr10 (9379455-9379283) | |
| 554-706, gnl|galGal2|chr10 (9379286-9379436) | |
| 554-706, gnl|hg17|chr18 (45619487-45619668) | |
| 554-706, gnl|Hg17|chr18 (45619664-45619512) | |
| 554-706, gnl|hg17|chr9 (44315301-44315451) | |
| 554-706, gnl|loxAfr1|scaffold_14163 (35076-34918) | |
| 554-706, gnl|loxAfr1|scaffold_14163 (34918-35050) | |
| 554-706, gnl|mm7|chr18 (75140088-75139917) | |
| 554-706, gnl|mm7|chr18 (75139920-75140070) | |
| 554-706, gnl|Mm7|chr18 (75139919-75140071) | |
| 554-706, gnl|monDom2|scaffold_58 (9918172-9918351) | |
| 554-706, gnl|monDom2|scaffold_58 (9918350-9918201) | |
| 554-706, gnl|oryCun1|scaffold_203510 (54207-54041) | |
| 554-706, gnl|oryCun1|scaffold_203510 (54044-54194) | |
| 554-706, gnl|panTro1|chr17 (42095901-42096082) | |
| 554-706, gnl|panTro1|chrUn_random (3078749-3078599) | |
| 554-706, gnl|rheMac2|chr18 (42882482-42882663) | |
| 554-706, gnl|rheMac2|chr18 (42882660-42882510) | |
| 554-706, gnl|rn3|chr18 (71642832-71642661) | |
| 554-706, gnl|rn3|chr18 (71642664-71642814) | |
| 554-706, gnl|tetNig1|chr4 (5195804-5195644) | |
| 554-706, gnl|tetNig1|chr4 (5195647-5195797) | |
| 554-706, gnl|xenTro1|scaffold_175 (1797883-1797719) | |
| 554-706, gnl|xenTro1|scaffold_175 (1797722-1797871) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) | |
| jej (0.0989218) |