Non-Coding RNA Search

Ss1.1-Thy1-THY010001H01.5

Sequence:


               
               TTTGGAAGAGTATTGGGTATTAGTGTTGCCCTGGAGGAGGATGAGAATTGAACCCTATTT
AGAGGGAGAACAGAAAGACTCCTGTGAGGAGTGTGGGTAAATAAACAAGGAATACACCAT
GAAGATCATTGCTTAGCTCTTTTAATTCTTGATTTTTAAAAATTATTTGTAGAATTTTAG
AATCATTCACTAGTACACATGTTTTGTTTCCATTGAGACTGTCTCCTAAGGAAAAGAGCT
ATGTGGTTTCAAAGTGCTTCTTGATACTGAGTTTACGAAAGAATCAAGCTGTGATGGGGA
GGAATCCTAAGAGATTTTACCAAGAAAAATTCATTGGAGACTTGTAGAAGTGCCTTTTAG
GCAAGTAAGAGAAATTCTGGATTATCTGGCAGTTAGGAAGACAGTTAAGTATTAATATTA
AGTTCAGTCTCATTTGACTTTTCCCTTGAGTCTGTATTGCTTCAGTTTTTGACCCATAGT
TCTATCATTTCAAGGTTGCCTTAGCCATTCCCCTCTTCGACATAAACGTCATAGTAAATG
AAAGATTGTGTGAAACAGATCTTCATTTTATTGAGTATTTCTGCATTTCTTACCTTGATA
TTGGCTCTTAGACTTTTATTGTGACATATGGGATGCTTTGAAATTAATATTGGTAGCTTT
ATATTAATATATGGATTATCCACATGTCATTCATTAGGTAAGTATTTTAAACAGCAGCCA
CACAATGCTAGATAATGGGAACATGAATAAACAATTTAGTCTCTATATTCAAGCTGCTTC
TAGAATGGCAGGGCAGACAAAATTAATAAACCAGAAGAAGAACAATGGTAGAGGGATGCA
CAGTTTCCTGTTGAATAAAGAAAAGCAGTTAACTCAAACTCAGGATTTTACCTTGGGAGG
ATTTGATCTTTTGAGTTAAGCTTTTAAATAGAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGAAGAGTATTGGGTATTAGTGTTGCCCTGGAGGAGGATGAGAATTGAACCCTATTT
AGAGGGAGAACAGAAAGACTCCTGTGAGGAGTGTGGGTAAATAAACAAGGAATACACCAT
GAAGATCATTGCTTAGCTCTTTTAATTCTTGATTTTTAAAAATTATTTGTAGAATTTTAG
AATCATTCACTAGTACACATGTTTTGTTTCCATTGAGACTGTCTCCTAAGGAAAAGAGCT
ATGTGGTTTCAAAGTGCTTCTTGATACTGAGTTTACGAAAGAATCAAGCTGTGATGGGGA
GGAATCCTAAGAGATTTTACCAAGAAAAATTCATTGGAGACTTGTAGAAGTGCCTTTTAG
GCAAGTAAGAGAAATTCTGGATTATCTGGCAGTTAGGAAGACAGTTAAGTATTAATATTA
AGTTCAGTCTCATTTGACTTTTCCCTTGAGTCTGTATTGCTTCAGTTTTTGACCCATAGT
TCTATCATTTCAAGGTTGCCTTAGCCATTCCCCTCTTCGACATAAACGTCATAGTAAATG
AAAGATTGTGTGAAACAGATCTTCATTTTATTGAGTATTTCTGCATTTCTTACCTTGATA
TTGGCTCTTAGACTTTTATTGTGACATATGGGATGCTTTGAAATTAATATTGGTAGCTTT
ATATTAATATATGGATTATCCACATGTCATTCATTAGGTAAGTATTTTAAACAGCAGCCA
CACAATGCTAGATAATGGGAACATGAATAAACAATTTAGTCTCTATATTCAAGCTGCTTC
TAGAATGGCAGGGCAGACAAAATTAATAAACCAGAAGAAGAACAATGGTAGAGGGATGCA
CAGTTTCCTGTTGAATAAAGAAAAGCAGTTAACTCAAACTCAGGATTTTACCTTGGGAGG
ATTTGATCTTTTGAGTTAAGCTTTTAAATAGAAAAG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-931, gnl|bosTau2|chr2 (38558374-38557445)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-931, gnl|bosTau2|chr2 (38558374-38557445)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)