Ss1.1-Thy1-THY010002C01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCAGTGACCGAAGATCTCCACTTCGGGCCCGCAGCGGGCACCCGCTTCTTCTGCACCG CGAGCCGCGGCCTGGAGCCCTTCCTGCTGCGGGAGGTGCGGACGCGGCTGAGGGCCACGC AGGTTGAATATATTTCAGGAAAAGTTTTTTTCACCACCTGTTGTGACTTGAATATGCTGA AAAGATTAAAATCTGCTGAAAGATTATTTTTGCTGATTAAAAAGCAGTTTCCATTTAATG TTTCTTCTGTAAGTAAAGGACAAATATTTAATGAAATGGAAAAACTTATAAACGATGATC CTGAAAATTGGTTGAATACTCTTTCAATCTGGAAAAATCTTCTTGAATTTGATGCAAAAG AGGAAGAACTTTCTCAAAAAGATGTTAACTCACTAAAAAGAAAAGTGGGAGAAGATGATA ATACCATTGCTAAGAAAGTAAAAACAGAACAAGTGCAGGAGATACACGAGAATAAGGAAT GCCAGCGAGAAAAACAAACAGAAGAAACACTGGAGCAAGGAAACTGTATCACTCAAAGAG AAGAACTTCAAGAAGAAGAACTTCAGAATGATGCAGTGGAAGCGGTCGATACTCCTACTA AAGGGAAGCACTTGACTTTCAGAGTTTCTTGTCGCTGCAGTGGAGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCAGTGACCGAAGATCTCCACTTCGGGCCCGCAGCGGGCACCCGCTTCTTCTGCACCG CGAGCCGCGGCCTGGAGCCCTTCCTGCTGCGGGAGGTGCGGACGCGGCTGAGGGCCACGC AGGTTGAATATATTTCAGGAAAAGTTTTTTTCACCACCTGTTGTGACTTGAATATGCTGA AAAGATTAAAATCTGCTGAAAGATTATTTTTGCTGATTAAAAAGCAGTTTCCATTTAATG TTTCTTCTGTAAGTAAAGGACAAATATTTAATGAAATGGAAAAACTTATAAACGATGATC CTGAAAATTGGTTGAATACTCTTTCAATCTGGAAAAATCTTCTTGAATTTGATGCAAAAG AGGAAGAACTTTCTCAAAAAGATGTTAACTCACTAAAAAGAAAAGTGGGAGAAGATGATA ATACCATTGCTAAGAAAGTAAAAACAGAACAAGTGCAGGAGATACACGAGAATAAGGAAT GCCAGCGAGAAAAACAAACAGAAGAAACACTGGAGCAAGGAAACTGTATCACTCAAAGAG AAGAACTTCAAGAAGAAGAACTTCAGAATGATGCAGTGGAAGCGGTCGATACTCCTACTA AAGGGAAGCACTTGACTTTCAGAGTTTCTTGTCGCTGCAGTGGAGCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-124, gnl|bosTau2|chr11 (17064153-17064030) | |
| 1-124, gnl|canFam2|chr17 (34842853-34843105) | |
| 1-124, gnl|dasNov1|scaffold_27152 (40178-39963) | |
| 1-124, gnl|galGal2|chr3 (13062968-13063191) | |
| 1-124, gnl|hg17|chr2 (39917821-39918061) | |
| 1-124, gnl|Hg17|chr2 (39918026-39917903) | |
| 1-124, gnl|mm7|chr17 (79361968-79362207) | |
| 1-124, gnl|Mm7|chr17 (79362175-79362052) | |
| 1-124, gnl|monDom2|scaffold_23 (43383724-43384027) | |
| 1-124, gnl|oryCun1|scaffold_191289 (110686-110901) | |
| 1-124, gnl|panTro1|chr12 (41416582-41416822) | |
| 1-124, gnl|rheMac2|chr13 (39768180-39768425) | |
| 1-124, gnl|rn3|chr6 (4026663-4026900) | |
| 257-647, gnl|bosTau2|chr11 (17057100-17056719) | |
| 257-647, gnl|canFam2|chr17 (34832210-34832697) | |
| 257-647, gnl|dasNov1|scaffold_7393 (28358-28850) | |
| 257-647, gnl|echTel1|scaffold_162177 (1548-2008) | |
| 257-647, gnl|galGal2|chr3 (13061755-13062232) | |
| 257-647, gnl|hg17|chr2 (39908479-39908968) | |
| 257-647, gnl|Hg17|chr2 (39908912-39908525) | |
| 257-647, gnl|loxAfr1|scaffold_15406 (9208-8731) | |
| 257-647, gnl|mm7|chr17 (79351224-79351711) | |
| 257-647, gnl|Mm7|chr17 (79351652-79351265) | |
| 257-647, gnl|monDom2|scaffold_23 (43369051-43369512) | |
| 257-647, gnl|oryCun1|scaffold_191289 (100919-101397) | |
| 257-647, gnl|panTro1|chr12 (41407266-41407752) | |
| 257-647, gnl|rheMac2|chr13 (39758888-39759380) | |
| 257-647, gnl|rn3|chr6 (4015481-4015971) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-124, gnl|bosTau2|chr11 (17064153-17064030) | |
| 1-124, gnl|canFam2|chr17 (34842853-34843105) | |
| 1-124, gnl|dasNov1|scaffold_27152 (40178-39963) | |
| 1-124, gnl|galGal2|chr3 (13062968-13063191) | |
| 1-124, gnl|hg17|chr2 (39917821-39918061) | |
| 1-124, gnl|Hg17|chr2 (39918026-39917903) | |
| 1-124, gnl|mm7|chr17 (79361968-79362207) | |
| 1-124, gnl|Mm7|chr17 (79362175-79362052) | |
| 1-124, gnl|monDom2|scaffold_23 (43383724-43384027) | |
| 1-124, gnl|oryCun1|scaffold_191289 (110686-110901) | |
| 1-124, gnl|panTro1|chr12 (41416582-41416822) | |
| 1-124, gnl|rheMac2|chr13 (39768180-39768425) | |
| 1-124, gnl|rn3|chr6 (4026663-4026900) | |
| 257-647, gnl|bosTau2|chr11 (17057100-17056719) | |
| 257-647, gnl|canFam2|chr17 (34832210-34832697) | |
| 257-647, gnl|dasNov1|scaffold_7393 (28358-28850) | |
| 257-647, gnl|echTel1|scaffold_162177 (1548-2008) | |
| 257-647, gnl|galGal2|chr3 (13061755-13062232) | |
| 257-647, gnl|hg17|chr2 (39908479-39908968) | |
| 257-647, gnl|Hg17|chr2 (39908912-39908525) | |
| 257-647, gnl|loxAfr1|scaffold_15406 (9208-8731) | |
| 257-647, gnl|mm7|chr17 (79351224-79351711) | |
| 257-647, gnl|Mm7|chr17 (79351652-79351265) | |
| 257-647, gnl|monDom2|scaffold_23 (43369051-43369512) | |
| 257-647, gnl|oryCun1|scaffold_191289 (100919-101397) | |
| 257-647, gnl|panTro1|chr12 (41407266-41407752) | |
| 257-647, gnl|rheMac2|chr13 (39758888-39759380) | |
| 257-647, gnl|rn3|chr6 (4015481-4015971) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fcc (0.197785) | |
| col (0.195008) | |
| clu (0.119646) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| col (0.195008) | |
| clu (0.119646) | |
| cty (0.10408) |