Non-Coding RNA Search

Ss1.1-Thy1-THY010014G09.5

Sequence:


               
               AGCATTTCGTCCTAGCATCTGACCTCACCGCTCACTCTGTTTGCATATCTGTCCTGTTTC
CCTGAGAAGGTCTTTTGGGGCTCACAGCACAATTGTCTCATCTTCTGGAAGGCATGTTTC
TGATATTAGAATTTATGTCCCTCCCAAGTAAAGGGCTGGGGGCAGTCTTTTCTGAAAGTG
AGCCCTTCTAAGCAGGAGCAGCTGCGGGCCTTGGAGCAGGACAACTGTAGCCTGGCTGCC
CTGGTGTGCAAAGTGAGGAGCCTGGGCCGCTGGAGGCTGGCAGCACAGCAGGAGCGCTTC
CGGGGCCAGCTGAGCAAGGCTGAGAAGGAAGCTATGCAAAGTAAAAAAGAGTGTTTGAAC
ATCAAGCTAATGGCAGAACAAGAAGTGGTTTTACTTCGGCAGCAGTTACTGGCTCTAAGG
CAGGCTCTGGCCAGGGCTCAGGCGGACAACGTGAGGATGAGCAAGCAGCAGGAGAACCAG
GGGCAGTTGCTGAAAGAGTTAGAACATAGAGTGACCCAGGAAGCTCTCCACCGGCAGCAG
CTGGATTTAATGAAGACCTCCAGCATGGAGAAGCTCTTGGAGGATGTGGAGCAAAAAGAA
CAGCACCTGCAGCTCCTTACTGAAGAGGCCGAGAGGGCTTCTAAACTGGGCCAGCTCCAG
CAGAAGAAAATTCAGAGAGAACTCCAACAGGTTTTATATCTCAGGCTCACTATTCCCTAA
GTTCTGCTTCCACATCATCCAGATACTCCCAGCAACACCGTTTAAAGACTCATCTCAAGA
CGAGTGAAATAACAAGAAAGATCCAAAGGCCAAAGACAGTGCCTATTAAACACAAAAAAA
GAACTGACCATGTCTTCTTACCCAATGTGGCAGAAAATGTTCAACTTACAGCTTTTCAAG
TTAAAACAGCTCCCTCTAGAATCCCATTCAGACCTGATTGGTAATCATATATCCTTTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATTTCGTCCTAGCATCTGACCTCACCGCTCACTCTGTTTGCATATCTGTCCTGTTTC
CCTGAGAAGGTCTTTTGGGGCTCACAGCACAATTGTCTCATCTTCTGGAAGGCATGTTTC
TGATATTAGAATTTATGTCCCTCCCAAGTAAAGGGCTGGGGGCAGTCTTTTCTGAAAGTG
AGCCCTTCTAAGCAGGAGCAGCTGCGGGCCTTGGAGCAGGACAACTGTAGCCTGGCTGCC
CTGGTGTGCAAAGTGAGGAGCCTGGGCCGCTGGAGGCTGGCAGCACAGCAGGAGCGCTTC
CGGGGCCAGCTGAGCAAGGCTGAGAAGGAAGCTATGCAAAGTAAAAAAGAGTGTTTGAAC
ATCAAGCTAATGGCAGAACAAGAAGTGGTTTTACTTCGGCAGCAGTTACTGGCTCTAAGG
CAGGCTCTGGCCAGGGCTCAGGCGGACAACGTGAGGATGAGCAAGCAGCAGGAGAACCAG
GGGCAGTTGCTGAAAGAGTTAGAACATAGAGTGACCCAGGAAGCTCTCCACCGGCAGCAG
CTGGATTTAATGAAGACCTCCAGCATGGAGAAGCTCTTGGAGGATGTGGAGCAAAAAGAA
CAGCACCTGCAGCTCCTTACTGAAGAGGCCGAGAGGGCTTCTAAACTGGGCCAGCTCCAG
CAGAAGAAAATTCAGAGAGAACTCCAACAGGTTTTATATCTCAGGCTCACTATTCCCTAA
GTTCTGCTTCCACATCATCCAGATACTCCCAGCAACACCGTTTAAAGACTCATCTCAAGA
CGAGTGAAATAACAAGAAAGATCCAAAGGCCAAAGACAGTGCCTATTAAACACAAAAAAA
GAACTGACCATGTCTTCTTACCCAATGTGGCAGAAAATGTTCAACTTACAGCTTTTCAAG
TTAAAACAGCTCCCTCTAGAATCCCATTCAGACCTGATTGGTAATCATATATCCTTTTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5JSU7_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5JSU7_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               67-328, gnl|bosTau2|chr9 (22995903-22996162)
               

               
               67-328, gnl|Hg17|chr6 (109769071-109769330)
               

               
               67-328, gnl|Mm7|chr10 (41363980-41363733)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-328, gnl|bosTau2|chr9 (22995903-22996162)
               

               
               67-328, gnl|Hg17|chr6 (109769071-109769330)
               

               
               67-328, gnl|Mm7|chr10 (41363980-41363733)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               med (0.116252)

	67-328, gnl\|bosTau2\|chr9 (22995903-22996162)
	67-328, gnl\|Hg17\|chr6 (109769071-109769330)
	67-328, gnl\|Mm7\|chr10 (41363980-41363733)