Non-Coding RNA Search

Ss1.1-Thy1-THY010019F02.5

Sequence:


               
               AGAAAAAAGGGGCGGATTTGTTTTTGAAGCTCTGTCTTGGATATCTATTTAATGTGTGTT
CTGATGGGGTTTTTTTAAACAATTTTTAAATAACGTCTGTGCCTCCGCTGGTCTGAGGGT
GGAGGCCCCAGGCAGGAACCGCCTACCCCCCCTCTGCCCTCACCAGGGTCGTCCCCCCCC
AGAAAGCATTACCCGCCCTTGGGGGGGGGGGTCGGGCTGTGGGGTTCTCAGCACCTTGCG
GGAATTTCCTGTATGAAAACAAAATTGGAAAAGAAAACCTACACAAACACAGTGATTTCA
AGGAATAAACAGAAAATGAAACAGTGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAAAAAGGGGCGGATTTGTTTTTGAAGCTCTGTCTTGGATATCTATTTAATGTGTGTT
CTGATGGGGTTTTTTTAAACAATTTTTAAATAACGTCTGTGCCTCCGCTGGTCTGAGGGT
GGAGGCCCCAGGCAGGAACCGCCTACCCCCCCTCTGCCCTCACCAGGGTCGTCCCCCCCC
AGAAAGCATTACCCGCCCTTGGGGGGGGGGGTCGGGCTGTGGGGTTCTCAGCACCTTGCG
GGAATTTCCTGTATGAAAACAAAATTGGAAAAGAAAACCTACACAAACACAGTGATTTCA
AGGAATAAACAGAAAATGAAACAGTGAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-323, gnl|bosTau2|chr7 (29191862-29191532)
               

               
               4-323, gnl|Hg17|chr19 (1209801-1210140)
               

               
               4-323, gnl|Mm7|chr10 (79940329-79940660)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-323, gnl|bosTau2|chr7 (29191862-29191532)
               

               
               4-323, gnl|Hg17|chr19 (1209801-1210140)
               

               
               4-323, gnl|Mm7|chr10 (79940329-79940660)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               col (0.195008)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)
               

               
               eru (0.120048)
               

               
               ebs (0.118301)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)
               

               
               eru (0.120048)
               

               
               ebs (0.118301)

	4-323, gnl\|bosTau2\|chr7 (29191862-29191532)
	4-323, gnl\|Hg17\|chr19 (1209801-1210140)
	4-323, gnl\|Mm7\|chr10 (79940329-79940660)

	col (0.195008)
	fty (0.17584)
	lnt (0.142308)
	eru (0.120048)
	ebs (0.118301)