Non-Coding RNA Search

Ss1.1-Thy1-THY010020G02.5

Sequence:


               
               CTGCCCGGGCAGTTCCACTTGACTAACCTGTGATCTAATGACAGTAATGCCGGGTTACAG
TGGCCATTTTGTGCGCTTTGATGAGGACAGCCAGACAGAGTGGGAGAAAGGCCATGTCTG
CGGAGAAAAGGAGAGGCAGGGTGAGGGGACAGTGTGAAAAAGACTTGTTAGCCCACATTA
GTTTGCCTGATTTACTTCACCACAGGTCAGGAAAGGCCAGCGGTGGGGTTGTCGTTAAAT
CACAACGTTGAAAATCCTGGTATTCCGCGGCTTTCAGATCTCAGAGCTGTCAGTTGGCTG
ATGTGAACTCACCTTGGCATTGCACCAAACAGGGGAACATCACACGTTCCTTCACTCTTA
CATATATTTAGAGAATAATTCTGTGATCCTGGATGCTTTTTTGATGCTGCCAGTTCTCAA
CTCCCTGTCATTGTTGGGCCATGGTACAGTGAGCTTGGAGGCAAAAAGGAAGTCAAACCC
GGGGCAAGTCGTTGCACTTTTTTCGTGCCCTGTGTTCGACCTTTAATGAAGTGCCCATGC
TTTCCACTTGGAAATGCTGCAAGAGGGCCTTTGCGAATTGCCATCTGGATGAAGCTCTGA
AATTTGCACATCTCCTCGAATGTGTGTCTGAGTGTCAGTGTGCACGTGCTTGTGTGTCAG
GTCGATTGGAAGAACCAAACTAGGTTTCCACTTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCCCGGGCAGTTCCACTTGACTAACCTGTGATCTAATGACAGTAATGCCGGGTTACAG
TGGCCATTTTGTGCGCTTTGATGAGGACAGCCAGACAGAGTGGGAGAAAGGCCATGTCTG
CGGAGAAAAGGAGAGGCAGGGTGAGGGGACAGTGTGAAAAAGACTTGTTAGCCCACATTA
GTTTGCCTGATTTACTTCACCACAGGTCAGGAAAGGCCAGCGGTGGGGTTGTCGTTAAAT
CACAACGTTGAAAATCCTGGTATTCCGCGGCTTTCAGATCTCAGAGCTGTCAGTTGGCTG
ATGTGAACTCACCTTGGCATTGCACCAAACAGGGGAACATCACACGTTCCTTCACTCTTA
CATATATTTAGAGAATAATTCTGTGATCCTGGATGCTTTTTTGATGCTGCCAGTTCTCAA
CTCCCTGTCATTGTTGGGCCATGGTACAGTGAGCTTGGAGGCAAAAAGGAAGTCAAACCC
GGGGCAAGTCGTTGCACTTTTTTCGTGCCCTGTGTTCGACCTTTAATGAAGTGCCCATGC
TTTCCACTTGGAAATGCTGCAAGAGGGCCTTTGCGAATTGCCATCTGGATGAAGCTCTGA
AATTTGCACATCTCCTCGAATGTGTGTCTGAGTGTCAGTGTGCACGTGCTTGTGTGTCAG
GTCGATTGGAAGAACCAAACTAGGTTTCCACTTTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-658, gnl|bosTau2|chr20 (14139387-14138717)
               

               
               3-658, gnl|Hg17|chr5 (53430090-53429420)
               

               
               3-658, gnl|Mm7|chr13 (111153618-111154267)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-658, gnl|bosTau2|chr20 (14139387-14138717)
               

               
               3-658, gnl|Hg17|chr5 (53430090-53429420)
               

               
               3-658, gnl|Mm7|chr13 (111153618-111154267)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	3-658, gnl\|bosTau2\|chr20 (14139387-14138717)
	3-658, gnl\|Hg17\|chr5 (53430090-53429420)
	3-658, gnl\|Mm7\|chr13 (111153618-111154267)