Ss1.1-Thy1-THY010026F12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGTGGCACCACCAGCCCAGAATGTTCCGAGGCGGCGGGATTAAGGATGACTTCGTACA GCCCTAGATGTCTGTCGATCCTCAAGATATCGATGGTGCTTTTGGTCCTGAGCGTTGGAC TCTTTATGTTCCAAAGCGTGTTCCTCGATACAGACTTCAGTCTCCTCAACTCACCCATCC CGTCCCCCACCCTGGATGCGCAGACGCTGAAGCTTCTACCTGAGAAACCCGATTTCTACG GTGAAAACGGGCTGTTCCCGAAAAACCAGTGCCAATGTGACGCCTTCGGGCATCAGGAAA GCTATAACTTGGAGGATGCCTACGACCCGCGTGACCTCCCCGCAGTGAACCTGAGGAGAC AGGCTGAGCTCGAACACTTTCAGAGGAGAGAAGGGCTCCCTCGCCCACCGCCCCTGCTGG CTCAGCCCAACCTCCCCTTTGGGTACCCGGTCCACGGGGTGGAAGTGATGCCTCTACACA CCATCCCCATCCCAGGCCTCCGGTTTGAAGGACCAGATGCTCCCATCTATGAGGTCACCC TGACAGCTTCTCTGGGGACACTGAACACCCTTGCTGACGTCCCAGACAATGTGGTGAAGG GCAGAGGCCAGAAGCAGCTGAACATTTTGACCAGTAGCCGGGAGCTTTTGAATTTCATCC TCCAGCATGTGACATACACGAGCACAGAGTACCACCTCCACAGAGTGGATGTGGTGAGTC TGGAGTCCAAGTCCTCAGTGGCCAAGTTTCCGGTGACCATCCGCTATCCTGTCATGCCCA AGTTATATGACCCTGGACCAGAGAGGAAGCTCCGAGACCTGGTGACCATTGCCACCAAAA CCTTCCTCCGTCCCCACAAGCTCATGACCATGCTCCGGAGTGTTCGTGAGTACTACCCAG ACCTGACGGTGATCGTGGCCGATGACAGCAAGGAGCCCCTGAAAATCACTGACAGCCACG TGGAGTATTACACCATGCCATTTGGGAAGGGCTGGTTTGCTGGCAGGAACCTGGCCATAT CTCAGGTCACCACCAAATATGTGCTCTGGGTGGACGATGACTTCATCTTCAACAGCAAGA CCAGGATCGAGGCGCTGGTGGACGTCCTAGAGAAAACGGAACTGGACGTGGTAGGTGGCA GCGTGATTGAAAACACATTCCAGTTCAAGCTGTTGCTGGAGCAGGGGAAGAATGGCTACT GTCTCCACCAGCAGCCAGGATTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGTGGCACCACCAGCCCAGAATGTTCCGAGGCGGCGGGATTAAGGATGACTTCGTACA GCCCTAGATGTCTGTCGATCCTCAAGATATCGATGGTGCTTTTGGTCCTGAGCGTTGGAC TCTTTATGTTCCAAAGCGTGTTCCTCGATACAGACTTCAGTCTCCTCAACTCACCCATCC CGTCCCCCACCCTGGATGCGCAGACGCTGAAGCTTCTACCTGAGAAACCCGATTTCTACG GTGAAAACGGGCTGTTCCCGAAAAACCAGTGCCAATGTGACGCCTTCGGGCATCAGGAAA GCTATAACTTGGAGGATGCCTACGACCCGCGTGACCTCCCCGCAGTGAACCTGAGGAGAC AGGCTGAGCTCGAACACTTTCAGAGGAGAGAAGGGCTCCCTCGCCCACCGCCCCTGCTGG CTCAGCCCAACCTCCCCTTTGGGTACCCGGTCCACGGGGTGGAAGTGATGCCTCTACACA CCATCCCCATCCCAGGCCTCCGGTTTGAAGGACCAGATGCTCCCATCTATGAGGTCACCC TGACAGCTTCTCTGGGGACACTGAACACCCTTGCTGACGTCCCAGACAATGTGGTGAAGG GCAGAGGCCAGAAGCAGCTGAACATTTTGACCAGTAGCCGGGAGCTTTTGAATTTCATCC TCCAGCATGTGACATACACGAGCACAGAGTACCACCTCCACAGAGTGGATGTGGTGAGTC TGGAGTCCAAGTCCTCAGTGGCCAAGTTTCCGGTGACCATCCGCTATCCTGTCATGCCCA AGTTATATGACCCTGGACCAGAGAGGAAGCTCCGAGACCTGGTGACCATTGCCACCAAAA CCTTCCTCCGTCCCCACAAGCTCATGACCATGCTCCGGAGTGTTCGTGAGTACTACCCAG ACCTGACGGTGATCGTGGCCGATGACAGCAAGGAGCCCCTGAAAATCACTGACAGCCACG TGGAGTATTACACCATGCCATTTGGGAAGGGCTGGTTTGCTGGCAGGAACCTGGCCATAT CTCAGGTCACCACCAAATATGTGCTCTGGGTGGACGATGACTTCATCTTCAACAGCAAGA CCAGGATCGAGGCGCTGGTGGACGTCCTAGAGAAAACGGAACTGGACGTGGTAGGTGGCA GCGTGATTGAAAACACATTCCAGTTCAAGCTGTTGCTGGAGCAGGGGAAGAATGGCTACT GTCTCCACCAGCAGCCAGGATTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 58-228, gnl|bosTau2|chr19 (30228781-30228611) | |
| 58-228, gnl|canFam2|chr9 (28644142-28644299) | |
| 58-228, gnl|dasNov1|scaffold_65735 (1465-1275) | |
| 58-228, gnl|echTel1|scaffold_196420 (897-718) | |
| 58-228, gnl|hg17|chr17 (44573570-44573739) | |
| 58-228, gnl|Hg17|chr17 (44573604-44573774) | |
| 58-228, gnl|loxAfr1|scaffold_21831 (19122-19290) | |
| 58-228, gnl|mm7|chr11 (96001042-96000868) | |
| 58-228, gnl|Mm7|chr11 (96001001-96000831) | |
| 58-228, gnl|oryCun1|scaffold_70522 (3967-3798) | |
| 58-228, gnl|panTro1|chr19_random (43467498-43467667) | |
| 58-228, gnl|rheMac2|chr16 (33376216-33376385) | |
| 387-496, gnl|bosTau2|chr19 (30208181-30208072) | |
| 387-496, gnl|Hg17|chr17 (44585159-44585268) | |
| 387-496, gnl|Mm7|chr11 (95997954-95997845) | |
| 532-718, gnl|bosTau2|chr19 (30202569-30202382) | |
| 532-718, gnl|canFam2|chr9 (28654501-28654768) | |
| 532-718, gnl|echTel1|scaffold_176398 (5728-5484) | |
| 532-718, gnl|hg17|chr17 (44517855-44518109) | |
| 532-718, gnl|Hg17|chr17 (44591396-44591583) | |
| 532-718, gnl|loxAfr1|scaffold_403 (56531-56772) | |
| 532-718, gnl|mm7|chr11 (95985326-95985061) | |
| 532-718, gnl|Mm7|chr11 (95985319-95985135) | |
| 532-718, gnl|monDom2|scaffold_18 (44787697-44787430) | |
| 532-718, gnl|rheMac2|chr16 (33392580-33392836) | |
| 799-990, gnl|bosTau2|chr19 (30193908-30193717) | |
| 799-990, gnl|canFam2|chr9 (28664774-28664922) | |
| 799-990, gnl|danRer3|chr6 (21708058-21707922) | |
| 799-990, gnl|echTel1|scaffold_176398 (2858-2711) | |
| 799-990, gnl|fr1|chrUn (40875791-40875940) | |
| 799-990, gnl|hg17|chr17 (44596436-44596583) | |
| 799-990, gnl|Hg17|chr17 (44596446-44596637) | |
| 799-990, gnl|mm7|chr11 (95978479-95978328) | |
| 799-990, gnl|Mm7|chr11 (95978463-95978272) | |
| 799-990, gnl|monDom2|scaffold_18 (44781878-44781731) | |
| 799-990, gnl|oryCun1|scaffold_163227 (4928-5075) | |
| 799-990, gnl|panTro1|chr19_random (43489438-43489585) | |
| 799-990, gnl|rheMac2|chr16 (33398084-33398231) | |
| 799-990, gnl|rn3|chr10 (40590994-40591142) | |
| 799-990, gnl|tetNig1|chr11 (6537263-6537114) | |
| 799-990, gnl|xenTro1|scaffold_34 (2760563-2760709) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 58-228, gnl|bosTau2|chr19 (30228781-30228611) | |
| 58-228, gnl|canFam2|chr9 (28644142-28644299) | |
| 58-228, gnl|dasNov1|scaffold_65735 (1465-1275) | |
| 58-228, gnl|echTel1|scaffold_196420 (897-718) | |
| 58-228, gnl|hg17|chr17 (44573570-44573739) | |
| 58-228, gnl|Hg17|chr17 (44573604-44573774) | |
| 58-228, gnl|loxAfr1|scaffold_21831 (19122-19290) | |
| 58-228, gnl|mm7|chr11 (96001042-96000868) | |
| 58-228, gnl|Mm7|chr11 (96001001-96000831) | |
| 58-228, gnl|oryCun1|scaffold_70522 (3967-3798) | |
| 58-228, gnl|panTro1|chr19_random (43467498-43467667) | |
| 58-228, gnl|rheMac2|chr16 (33376216-33376385) | |
| 387-496, gnl|bosTau2|chr19 (30208181-30208072) | |
| 387-496, gnl|Hg17|chr17 (44585159-44585268) | |
| 387-496, gnl|Mm7|chr11 (95997954-95997845) | |
| 532-718, gnl|bosTau2|chr19 (30202569-30202382) | |
| 532-718, gnl|canFam2|chr9 (28654501-28654768) | |
| 532-718, gnl|echTel1|scaffold_176398 (5728-5484) | |
| 532-718, gnl|hg17|chr17 (44517855-44518109) | |
| 532-718, gnl|Hg17|chr17 (44591396-44591583) | |
| 532-718, gnl|loxAfr1|scaffold_403 (56531-56772) | |
| 532-718, gnl|mm7|chr11 (95985326-95985061) | |
| 532-718, gnl|Mm7|chr11 (95985319-95985135) | |
| 532-718, gnl|monDom2|scaffold_18 (44787697-44787430) | |
| 532-718, gnl|rheMac2|chr16 (33392580-33392836) | |
| 799-990, gnl|bosTau2|chr19 (30193908-30193717) | |
| 799-990, gnl|canFam2|chr9 (28664774-28664922) | |
| 799-990, gnl|danRer3|chr6 (21708058-21707922) | |
| 799-990, gnl|echTel1|scaffold_176398 (2858-2711) | |
| 799-990, gnl|fr1|chrUn (40875791-40875940) | |
| 799-990, gnl|hg17|chr17 (44596436-44596583) | |
| 799-990, gnl|Hg17|chr17 (44596446-44596637) | |
| 799-990, gnl|mm7|chr11 (95978479-95978328) | |
| 799-990, gnl|Mm7|chr11 (95978463-95978272) | |
| 799-990, gnl|monDom2|scaffold_18 (44781878-44781731) | |
| 799-990, gnl|oryCun1|scaffold_163227 (4928-5075) | |
| 799-990, gnl|panTro1|chr19_random (43489438-43489585) | |
| 799-990, gnl|rheMac2|chr16 (33398084-33398231) | |
| 799-990, gnl|rn3|chr10 (40590994-40591142) | |
| 799-990, gnl|tetNig1|chr11 (6537263-6537114) | |
| 799-990, gnl|xenTro1|scaffold_34 (2760563-2760709) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.165235) | |
| cbl (0.114797) |