Non-Coding RNA Search

Ss1.1-Thy1-THY010026G07.5

Sequence:


               
               ACTTCTCCTGCGGGAGGGCAGACGCAGCCTGGGTGCTGGGTATCCCTGGCGCCGCGCTCT
TTTGCTCTCCCGCCGCTCTGCCTGAACCCCGGAGGCGGCGCCGCATCGGGGGCCCGCCCC
GCGGCCCCGCCCGTCGGGAGCTCGCTCGGCGCCCAGAGCCAGCAGGAGTCCCGGCCGGAC
CGGGACATGTCCGCTGAGCCCGAGCTCATTGAGCTGCGGGAACTGGCACCCGCTCGGTGC
GCCGCCCCGGTCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATTGCTCCGGGCACA
GCGCGCAACAACGCAAGGCAGCTGGTCCCGGGCCGCGGCCACCGCTTCCAGCCTGCGGGG
CCCGCCACGCACACGTGGTGCGACCTCTGTGGTGACTTCATCTGGGGCGTCGTGCGCAAG
GGCCTGCAGTGCGCACATTGCAAGTTCACCTGCCACTACCGTTGCCGCGCGCTTGTCTGC
CTAGACTGCTGCGGGCCCCGGGACCTGGGCTGGGAACCGGCGCTGGAACGGGATACGAAC
GTGGTGAGCACGGGGCAGGGGAGTTTATGGGCAAGGCAGGGAGGAACAGACAAGCGGGGC
ACATTGCAGGCGTTCCTTAAAGCCGTCCGGCGCTACGCGCAAGGAACGTTGTAACTTCTC
CGTAGCAGAGAAGCTAACTCTGTGCGAGGACTCGAAGGGGTACACCGGGTGTTGACTAGG
CGCTGTCCACCAGGAGCCGCCCAGGCTCCGCGCAAGCGCAATTTCCACACCTTTCCACAT
CTGCATCCGGTCTTGTGGCCACGCTGGTGCACATGCGCACACTCTCGGACTAGTTCCTGG
TGGGAAGTGAGGCCTGTGAGGCAGAGTTGAGCTGCGCTGCACTGGCGAAGATATCGCTCC
TGGAGGCGTGGCCTCTGTGGTCCCGCCCTTCGACATTCCTCCTCCAATGACATGAGAGCT
AGATCCTGGCTGTCTACGTTTCAGTGTTAACGGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCTCCTGCGGGAGGGCAGACGCAGCCTGGGTGCTGGGTATCCCTGGCGCCGCGCTCT
TTTGCTCTCCCGCCGCTCTGCCTGAACCCCGGAGGCGGCGCCGCATCGGGGGCCCGCCCC
GCGGCCCCGCCCGTCGGGAGCTCGCTCGGCGCCCAGAGCCAGCAGGAGTCCCGGCCGGAC
CGGGACATGTCCGCTGAGCCCGAGCTCATTGAGCTGCGGGAACTGGCACCCGCTCGGTGC
GCCGCCCCGGTCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATTGCTCCGGGCACA
GCGCGCAACAACGCAAGGCAGCTGGTCCCGGGCCGCGGCCACCGCTTCCAGCCTGCGGGG
CCCGCCACGCACACGTGGTGCGACCTCTGTGGTGACTTCATCTGGGGCGTCGTGCGCAAG
GGCCTGCAGTGCGCACATTGCAAGTTCACCTGCCACTACCGTTGCCGCGCGCTTGTCTGC
CTAGACTGCTGCGGGCCCCGGGACCTGGGCTGGGAACCGGCGCTGGAACGGGATACGAAC
GTGGTGAGCACGGGGCAGGGGAGTTTATGGGCAAGGCAGGGAGGAACAGACAAGCGGGGC
ACATTGCAGGCGTTCCTTAAAGCCGTCCGGCGCTACGCGCAAGGAACGTTGTAACTTCTC
CGTAGCAGAGAAGCTAACTCTGTGCGAGGACTCGAAGGGGTACACCGGGTGTTGACTAGG
CGCTGTCCACCAGGAGCCGCCCAGGCTCCGCGCAAGCGCAATTTCCACACCTTTCCACAT
CTGCATCCGGTCTTGTGGCCACGCTGGTGCACATGCGCACACTCTCGGACTAGTTCCTGG
TGGGAAGTGAGGCCTGTGAGGCAGAGTTGAGCTGCGCTGCACTGGCGAAGATATCGCTCC
TGGAGGCGTGGCCTCTGTGGTCCCGCCCTTCGACATTCCTCCTCCAATGACATGAGAGCT
AGATCCTGGCTGTCTACGTTTCAGTGTTAACGGTTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|9965311|gb|AAG10038.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|9965311|gb|AAG10038.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               433-996, gnl|bosTau2|chr22 (38614374-38613811)
               

               
               433-996, gnl|Hg17|chr3 (50350450-50349872)
               

               
               433-996, gnl|Mm7|chr9 (107283582-107284101)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               433-996, gnl|bosTau2|chr22 (38614374-38613811)
               

               
               433-996, gnl|Hg17|chr3 (50350450-50349872)
               

               
               433-996, gnl|Mm7|chr9 (107283582-107284101)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	433-996, gnl\|bosTau2\|chr22 (38614374-38613811)
	433-996, gnl\|Hg17\|chr3 (50350450-50349872)
	433-996, gnl\|Mm7\|chr9 (107283582-107284101)