Ss1.1-Thy1-THY010027D05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGGCGGGAGCCGCGGTTGTGGCGGCGCGGGGGAGCTCCGAGGCGGCGGGGCCCGGCACG GCGGCACCATGGCGGACCAGTTTTATCTGGAAAATATAGACGAGTTCGTCACGGACCAGA ACAAAATCGTGACATACAAATGGCTGAGCTATACACTAGGAGTTCATGTTAATCAGGCCA AACAGATGCTGTATGACTATGTTGAAAGGAAGCGGAAGGAAAATTCGGGAGCCCAGCTGC ATGTTACCTATTTAGTGTCCGGCAGTCTCATTCAGAATGGACATTCCTGCCACAAGGTTG CAGTAGTGAGAGAAGATAAATTGGAAGCAGTGAAGTCCAAGCTAGCTGTGACTGCCAGCG TACATGTGTACAGCATCCAGAAAGCCATGCTAAAGGACAGTGGGCCTCTGTTCAATACCG ACTATGACATCCTTAAAAGCAACTTGCAGAACTGCAGCAAGTTCAGTGCCATCCAGTGTG CAGCCGCAGTCCCGAGAGCTCCTGCTGAATCCTCATCTTCTGAAAAATTTGAGCAGTCAG ATCTTCCAGTGTCACCTGAGACACAGGCCAATAATGAGTTGACCACCAATGGTCATGGCC CCACTATCCCCAAACAGAGTCCCCAGCAGCCCAAAGGGATTATGGGCATGTTTGCTTCTA AAGCTGCTTCTAAAACCCAAGATGCCAACAAGGAAACCAAAGCAGAGGCTAAAGAGGTAA CGGATGCATCTTCAGTAGGCAACAAGGCATCAGGGAAGGGGAATACGATAAGCAATTTCT TTGGAAAAGCTGCTATGAATAAACTTAAAGTCAATTTGGATTCCGAACAAGCAGTGAAAG AAGAAAAAAAAGTAGAGCAACCTCCACTGTCTGACAATGAACCAAAGCTGGCAGCCCCTG CGGGCCTGAAGAAAGCTAGCAAAAAAGCAGAGCCTGTTAAGATGCAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGGCGGGAGCCGCGGTTGTGGCGGCGCGGGGGAGCTCCGAGGCGGCGGGGCCCGGCACG GCGGCACCATGGCGGACCAGTTTTATCTGGAAAATATAGACGAGTTCGTCACGGACCAGA ACAAAATCGTGACATACAAATGGCTGAGCTATACACTAGGAGTTCATGTTAATCAGGCCA AACAGATGCTGTATGACTATGTTGAAAGGAAGCGGAAGGAAAATTCGGGAGCCCAGCTGC ATGTTACCTATTTAGTGTCCGGCAGTCTCATTCAGAATGGACATTCCTGCCACAAGGTTG CAGTAGTGAGAGAAGATAAATTGGAAGCAGTGAAGTCCAAGCTAGCTGTGACTGCCAGCG TACATGTGTACAGCATCCAGAAAGCCATGCTAAAGGACAGTGGGCCTCTGTTCAATACCG ACTATGACATCCTTAAAAGCAACTTGCAGAACTGCAGCAAGTTCAGTGCCATCCAGTGTG CAGCCGCAGTCCCGAGAGCTCCTGCTGAATCCTCATCTTCTGAAAAATTTGAGCAGTCAG ATCTTCCAGTGTCACCTGAGACACAGGCCAATAATGAGTTGACCACCAATGGTCATGGCC CCACTATCCCCAAACAGAGTCCCCAGCAGCCCAAAGGGATTATGGGCATGTTTGCTTCTA AAGCTGCTTCTAAAACCCAAGATGCCAACAAGGAAACCAAAGCAGAGGCTAAAGAGGTAA CGGATGCATCTTCAGTAGGCAACAAGGCATCAGGGAAGGGGAATACGATAAGCAATTTCT TTGGAAAAGCTGCTATGAATAAACTTAAAGTCAATTTGGATTCCGAACAAGCAGTGAAAG AAGAAAAAAAAGTAGAGCAACCTCCACTGTCTGACAATGAACCAAAGCTGGCAGCCCCTG CGGGCCTGAAGAAAGCTAGCAAAAAAGCAGAGCCTGTTAAGATGCAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-132, gnl|bosTau2|chr15 (34722027-34721897) | |
| 1-132, gnl|canFam2|chr21 (26806660-26806362) | |
| 1-132, gnl|dasNov1|scaffold_15850 (8773-8451) | |
| 1-132, gnl|echTel1|scaffold_283711 (83474-83149) | |
| 1-132, gnl|hg17|chr11 (73981165-73981485) | |
| 1-132, gnl|Hg17|chr11 (73981289-73981415) | |
| 1-132, gnl|loxAfr1|scaffold_49698 (8413-8085) | |
| 1-132, gnl|mm7|chr7 (96167843-96167515) | |
| 1-132, gnl|Mm7|chr7 (96167720-96167602) | |
| 1-132, gnl|monDom2|scaffold_74 (2811783-2811442) | |
| 1-132, gnl|oryCun1|scaffold_177720 (16696-17022) | |
| 1-132, gnl|panTro1|chr9 (75272459-75272779) | |
| 1-132, gnl|rheMac2|chr14 (72759970-72760290) | |
| 1-132, gnl|rn3|chr1 (157569054-157568725) | |
| 181-286, gnl|bosTau2|chr15 (34710329-34710223) | |
| 181-286, gnl|Hg17|chr11 (73993380-73993486) | |
| 181-286, gnl|Mm7|chr7 (96158619-96158513) | |
| 458-726, gnl|bosTau2|chr15 (34698708-34698440) | |
| 458-726, gnl|Hg17|chr11 (74007227-74007498) | |
| 458-726, gnl|Mm7|chr7 (96146926-96146661) | |
| 794-946, gnl|bosTau2|chr15 (34696342-34696190) | |
| 794-946, gnl|canFam2|chr21 (26774835-26774635) | |
| 794-946, gnl|dasNov1|scaffold_10123 (14054-13855) | |
| 794-946, gnl|echTel1|scaffold_283711 (52382-52182) | |
| 794-946, gnl|galGal2|chr1 (186975426-186975608) | |
| 794-946, gnl|hg17|chr11 (74014087-74014287) | |
| 794-946, gnl|Hg17|chr11 (74014096-74014248) | |
| 794-946, gnl|loxAfr1|scaffold_18732 (47819-47619) | |
| 794-946, gnl|mm7|chr7 (96142793-96142594) | |
| 794-946, gnl|Mm7|chr7 (96142782-96142630) | |
| 794-946, gnl|monDom2|scaffold_74 (2772505-2772303) | |
| 794-946, gnl|oryCun1|scaffold_201394 (69407-69207) | |
| 794-946, gnl|panTro1|chr9 (75305323-75305523) | |
| 794-946, gnl|rheMac2|chr14 (72794505-72794705) | |
| 794-946, gnl|rn3|chr1 (157544333-157544133) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-132, gnl|bosTau2|chr15 (34722027-34721897) | |
| 1-132, gnl|canFam2|chr21 (26806660-26806362) | |
| 1-132, gnl|dasNov1|scaffold_15850 (8773-8451) | |
| 1-132, gnl|echTel1|scaffold_283711 (83474-83149) | |
| 1-132, gnl|hg17|chr11 (73981165-73981485) | |
| 1-132, gnl|Hg17|chr11 (73981289-73981415) | |
| 1-132, gnl|loxAfr1|scaffold_49698 (8413-8085) | |
| 1-132, gnl|mm7|chr7 (96167843-96167515) | |
| 1-132, gnl|Mm7|chr7 (96167720-96167602) | |
| 1-132, gnl|monDom2|scaffold_74 (2811783-2811442) | |
| 1-132, gnl|oryCun1|scaffold_177720 (16696-17022) | |
| 1-132, gnl|panTro1|chr9 (75272459-75272779) | |
| 1-132, gnl|rheMac2|chr14 (72759970-72760290) | |
| 1-132, gnl|rn3|chr1 (157569054-157568725) | |
| 181-286, gnl|bosTau2|chr15 (34710329-34710223) | |
| 181-286, gnl|Hg17|chr11 (73993380-73993486) | |
| 181-286, gnl|Mm7|chr7 (96158619-96158513) | |
| 458-726, gnl|bosTau2|chr15 (34698708-34698440) | |
| 458-726, gnl|Hg17|chr11 (74007227-74007498) | |
| 458-726, gnl|Mm7|chr7 (96146926-96146661) | |
| 794-946, gnl|bosTau2|chr15 (34696342-34696190) | |
| 794-946, gnl|canFam2|chr21 (26774835-26774635) | |
| 794-946, gnl|dasNov1|scaffold_10123 (14054-13855) | |
| 794-946, gnl|echTel1|scaffold_283711 (52382-52182) | |
| 794-946, gnl|galGal2|chr1 (186975426-186975608) | |
| 794-946, gnl|hg17|chr11 (74014087-74014287) | |
| 794-946, gnl|Hg17|chr11 (74014096-74014248) | |
| 794-946, gnl|loxAfr1|scaffold_18732 (47819-47619) | |
| 794-946, gnl|mm7|chr7 (96142793-96142594) | |
| 794-946, gnl|Mm7|chr7 (96142782-96142630) | |
| 794-946, gnl|monDom2|scaffold_74 (2772505-2772303) | |
| 794-946, gnl|oryCun1|scaffold_201394 (69407-69207) | |
| 794-946, gnl|panTro1|chr9 (75305323-75305523) | |
| 794-946, gnl|rheMac2|chr14 (72794505-72794705) | |
| 794-946, gnl|rn3|chr1 (157544333-157544133) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) | |
| eru (0.120048) | |
| cty (0.10408) |