Ss1.1-Thy1-THY010027D10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACTTGTATTGAGCGGTGCGGCGCGGTGGCGCCCGCGGAAGCGCCCGAGAAGGCGGGCGG AAGCCGGCTGCGGGCTGCGCGCGGGGCGGCGGGGCGGCGCGAAGCCAGGTCTCGGGGCTG GGCCCGCAGCATGCGCGCGGCCTGGGAATGAACTTCGCGGCCGGCCGCCGCGCGCTCCGC TGGCTGCCGCGGCCTGGGACCCGGCCGCTGACCCGCGCCGCCATGGAGGTGGCCCTCCGG GGCGCGCGGAAGATCCTCTGTGTGGCCGAGAAGAACGACGCTGCCAAGGGCATCGCCGAC CTGCTGGCCGGCGGCCGCGTGCGGCGGAGGGAAGGACTTTCTAGATTCAACAAGATCTAT GAGTTTGATTATCATCTGCTTGGCCAGAACGTTACTATGATAATGACGTCGGTTTCGGGA CACTTGCTGGCTCACGATTTCCAGATGCAGTTTCGCAAATGGCAGAGCTGCAATCCTCTG GTCCTCTTTGAAGCAGACATTGAAAAGTACTGCCCGGAGAATTTTGTGGACATCAAGAAA ACTCTGGAGCGGGAGGTGCGGCAGTGCCAGGCCCTGGTGATCTGGACCGACTGTGACAGA GAAGGTGAAAACATCGGGTTCGAGATCATCCACGTGTGCAGGGCTGTGAAGCCCGACCTG CCGGTGCTGCGAGCCCGTTTCTCCGAGATCACCTCCCGGGCCGTCCAGGCGGCCTGTGAG AACCTCACGGAGCCTGACCAGCGAGTGAGCGATGCCGTGGACGTGAGGCAGGAGCTGGAC CTGCGCATCGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACTTGTATTGAGCGGTGCGGCGCGGTGGCGCCCGCGGAAGCGCCCGAGAAGGCGGGCGG AAGCCGGCTGCGGGCTGCGCGCGGGGCGGCGGGGCGGCGCGAAGCCAGGTCTCGGGGCTG GGCCCGCAGCATGCGCGCGGCCTGGGAATGAACTTCGCGGCCGGCCGCCGCGCGCTCCGC TGGCTGCCGCGGCCTGGGACCCGGCCGCTGACCCGCGCCGCCATGGAGGTGGCCCTCCGG GGCGCGCGGAAGATCCTCTGTGTGGCCGAGAAGAACGACGCTGCCAAGGGCATCGCCGAC CTGCTGGCCGGCGGCCGCGTGCGGCGGAGGGAAGGACTTTCTAGATTCAACAAGATCTAT GAGTTTGATTATCATCTGCTTGGCCAGAACGTTACTATGATAATGACGTCGGTTTCGGGA CACTTGCTGGCTCACGATTTCCAGATGCAGTTTCGCAAATGGCAGAGCTGCAATCCTCTG GTCCTCTTTGAAGCAGACATTGAAAAGTACTGCCCGGAGAATTTTGTGGACATCAAGAAA ACTCTGGAGCGGGAGGTGCGGCAGTGCCAGGCCCTGGTGATCTGGACCGACTGTGACAGA GAAGGTGAAAACATCGGGTTCGAGATCATCCACGTGTGCAGGGCTGTGAAGCCCGACCTG CCGGTGCTGCGAGCCCGTTTCTCCGAGATCACCTCCCGGGCCGTCCAGGCGGCCTGTGAG AACCTCACGGAGCCTGACCAGCGAGTGAGCGATGCCGTGGACGTGAGGCAGGAGCTGGAC CTGCGCATCGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-327, gnl|bosTau2|chr19 (26653705-26653384) | |
| 1-327, gnl|Hg17|chr17 (18159095-18158638) | |
| 1-327, gnl|Mm7|chr11 (60858879-60858480) | |
| 630-791, gnl|bosTau2|chr19 (26643550-26643389) | |
| 630-791, gnl|canFam2|chr5 (44271980-44271804) | |
| 630-791, gnl|dasNov1|scaffold_270822 (1039-1221) | |
| 630-791, gnl|echTel1|scaffold_287489 (18210-18385) | |
| 630-791, gnl|fr1|chrUn (182860944-182860776) | |
| 630-791, gnl|galGal2|chr14 (7142859-7143037) | |
| 630-791, gnl|hg17|chr17 (18146616-18146798) | |
| 630-791, gnl|Hg17|chr17 (18146779-18146618) | |
| 630-791, gnl|loxAfr1|scaffold_17608 (44010-44183) | |
| 630-791, gnl|mm7|chr11 (60838160-60838342) | |
| 630-791, gnl|Mm7|chr11 (60838324-60838162) | |
| 630-791, gnl|monDom2|scaffold_55 (12067356-12067177) | |
| 630-791, gnl|oryCun1|scaffold_212504 (39483-39311) | |
| 630-791, gnl|panTro1|chr19 (18552582-18552764) | |
| 630-791, gnl|rheMac2|chr16 (18225219-18225401) | |
| 630-791, gnl|rn3|chr10 (46915643-46915825) | |
| 630-791, gnl|tetNig1|chrUn_random (38795702-38795869) | |
| 630-791, gnl|xenTro1|scaffold_142 (1082451-1082276) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-327, gnl|bosTau2|chr19 (26653705-26653384) | |
| 1-327, gnl|Hg17|chr17 (18159095-18158638) | |
| 1-327, gnl|Mm7|chr11 (60858879-60858480) | |
| 630-791, gnl|bosTau2|chr19 (26643550-26643389) | |
| 630-791, gnl|canFam2|chr5 (44271980-44271804) | |
| 630-791, gnl|dasNov1|scaffold_270822 (1039-1221) | |
| 630-791, gnl|echTel1|scaffold_287489 (18210-18385) | |
| 630-791, gnl|fr1|chrUn (182860944-182860776) | |
| 630-791, gnl|galGal2|chr14 (7142859-7143037) | |
| 630-791, gnl|hg17|chr17 (18146616-18146798) | |
| 630-791, gnl|Hg17|chr17 (18146779-18146618) | |
| 630-791, gnl|loxAfr1|scaffold_17608 (44010-44183) | |
| 630-791, gnl|mm7|chr11 (60838160-60838342) | |
| 630-791, gnl|Mm7|chr11 (60838324-60838162) | |
| 630-791, gnl|monDom2|scaffold_55 (12067356-12067177) | |
| 630-791, gnl|oryCun1|scaffold_212504 (39483-39311) | |
| 630-791, gnl|panTro1|chr19 (18552582-18552764) | |
| 630-791, gnl|rheMac2|chr16 (18225219-18225401) | |
| 630-791, gnl|rn3|chr10 (46915643-46915825) | |
| 630-791, gnl|tetNig1|chrUn_random (38795702-38795869) | |
| 630-791, gnl|xenTro1|scaffold_142 (1082451-1082276) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| med (0.116252) |