Non-Coding RNA Search

Ss1.1-Thy1-THY010029E09.5

Sequence:


               
               AACACTTTCTCTTTGTCGGAGGAGCTCCGCTGTTTCCTGTGCTGTAGCTCCCGTTGCGGC
GGCGCCCGTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCA
GGTGGGTGAAGGTTGCCGAACTGTCCCCCTGGCTGGACATGTGGGGTTTGACAGCTTGCC
CGACCAGCTGGTGAATAAGTCAGTCAGCCAGGGCTTCTGCTTCAACATCCTGTGCGTGGG
AGAGACAGGTTTGGGCAAGTCCACCCTTATGGACACCCTGTTCAACACCAAGTTCGAGGG
GGAGCCAGCCACCCATACACAGCCAGGTGTCCAGCTCCGGTCCAATACCTATGACCTTCA
AGAGAGCAACGTGGGCCTGAAGCTCACCATTGTTAGCACAGTGGGCTTCGGGGATCAGAT
CAACAAGGAAGACAGCTACAAGCCCATCGTGGAATTCATCGACGCCCAATTTGAGGCCTA
CCTGCAGGAGGAGCTAAAGATCCGCAGGGTACTGCACACCTACCACGACTCCCGCATCCA
CGCCTGCTTGTACTTCATCGCCCCCACGGGTCACTCCTTGAAGTCTCTGGACCTAGTGAC
GATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAATCGGATGCCAT
TTCTAAGAGTGAGCTAACGAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGG
AGTCCAGATCTACCAGTTCCCCACAGATGATGAGTCGGTGGCAGAGATCAATGGAACCAT
GAACGCCCACCTGCCGTTTGCCGTCATTGGCAGCACAGAGGAGCTGAAATGTGAAATGAA
GATGATGAAGGCCCCCACAGGAACCACTGGCTGTACTTCTCAAACACTTGCCCATGTCAG
CAGTTTGGGTCTGCTGCGGGAGATGCTGATCCGGGTCAACATGGAGGACCTCCGGGAGCA
GACGCACAGCCGGCACTATGAGCTGTACCGCCGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACTTTCTCTTTGTCGGAGGAGCTCCGCTGTTTCCTGTGCTGTAGCTCCCGTTGCGGC
GGCGCCCGTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCA
GGTGGGTGAAGGTTGCCGAACTGTCCCCCTGGCTGGACATGTGGGGTTTGACAGCTTGCC
CGACCAGCTGGTGAATAAGTCAGTCAGCCAGGGCTTCTGCTTCAACATCCTGTGCGTGGG
AGAGACAGGTTTGGGCAAGTCCACCCTTATGGACACCCTGTTCAACACCAAGTTCGAGGG
GGAGCCAGCCACCCATACACAGCCAGGTGTCCAGCTCCGGTCCAATACCTATGACCTTCA
AGAGAGCAACGTGGGCCTGAAGCTCACCATTGTTAGCACAGTGGGCTTCGGGGATCAGAT
CAACAAGGAAGACAGCTACAAGCCCATCGTGGAATTCATCGACGCCCAATTTGAGGCCTA
CCTGCAGGAGGAGCTAAAGATCCGCAGGGTACTGCACACCTACCACGACTCCCGCATCCA
CGCCTGCTTGTACTTCATCGCCCCCACGGGTCACTCCTTGAAGTCTCTGGACCTAGTGAC
GATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAATCGGATGCCAT
TTCTAAGAGTGAGCTAACGAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGG
AGTCCAGATCTACCAGTTCCCCACAGATGATGAGTCGGTGGCAGAGATCAATGGAACCAT
GAACGCCCACCTGCCGTTTGCCGTCATTGGCAGCACAGAGGAGCTGAAATGTGAAATGAA
GATGATGAAGGCCCCCACAGGAACCACTGGCTGTACTTCTCAAACACTTGCCCATGTCAG
CAGTTTGGGTCTGCTGCGGGAGATGCTGATCCGGGTCAACATGGAGGACCTCCGGGAGCA
GACGCACAGCCGGCACTATGAGCTGTACCGCCGCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5JTK2_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5JTK2_HUMAN

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               29-996, gnl|bosTau2|chr16 (36124975-36125933)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-996, gnl|bosTau2|chr16 (36124975-36125933)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fty (0.17584)
               

               
               ese (0.126502)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               ese (0.126502)
               

               
               cty (0.10408)