Non-Coding RNA Search

Ss1.1-Thy1-THY010030C01.5

Sequence:


               
               CTTTGTAGCACTTTTCACAATCTTTGTTTCTTGATTACTGGTTTTTCTGTCTTTACCACT
TTTCCTCACTGAGCTAAGCATCATTGAAGGCAGAGACTTTATTTTATTTGTTAATATGTG
CCCAAGTACCTTGCAGAGTGCTGGCTGAGAGTTGAAAAAAGGATGGTAGGCAATATTACA
TGTGCAAAGACCCTGTAGTGATTTTGACTGAAAAAAATGCACAATGAGAGAATTGTGAAT
TTAATTTTATTTGGGGCAAAATGAAGACTGTAGCCTGGGAGACAGCCTCTCAGATGGCTG
TGAGGACTCCTCTGAAGAGATGGGCAGGGAGGTCAGTATATATATGTGATTTTAGTGAAG
GCAAGCACATACGTTAGCAGAAGGTTGCTTCTAGTCATAATAAGGCTGCTCCTAGTCACC
AGGAGCAGATGTCTCTGTTAATGATTTTAGTGCTTTTCTAGATATGAGAAGAAACAAGAA
ATTGGGCTCATAAAATCTTCCCCTGAAAAACATCTAACCATCTGAGGGCCTGTTCTGCCA
GTTTTTCCCAGAGCACAGAGTGCCTCATTCTTGACCTCTACCCTGAACTCCTTTGAGGTT
GTGTTGAAGGTCAGCGATTACAGTGGCTAGTGACTTCATCCTTGTAGAGGCAGGTGGCAA
ATGACAATTTTTCATCCACAGTGAGAAGGAACAGGATGAAAAGCAGGGTCTAAAAAAGGC
TCTTGTGAGGTTCCCGCTGTGGCACAGTGTAAGAATCCGACTCCAGCAGCTCAGGTCACT
GCAGAGGTACAGGTTTGATCCCCAGCCTGGTGCAGTGGGTTCAGGGATCCTGCATTGTCA
CAGCTGTGGCTCAGATTCACTCCCTGGCCCAGGAACTTCCTCAGGTCCAGCCATTTAAAA
AAAAAAAAAAAAAAATTGCTATTGTGGCTATAGTGGGAGAAGCATGCTAAAGCTAGAGAG
AGATCCAGAGCCTAGTCACATAAAACTTTATAGACCATGTTCAGATTCTTGTTCTTAAAA
TAAAATTCTAGGAGTGTGGAAACTACTAAAATAATTTAAGCATTGGTTAATTTAGGATTA
AAAAAAAGAAAATTCCAGTTAAACTGAGAGCTTAAATGAATGTAGATCAGTCAGGAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGTAGCACTTTTCACAATCTTTGTTTCTTGATTACTGGTTTTTCTGTCTTTACCACT
TTTCCTCACTGAGCTAAGCATCATTGAAGGCAGAGACTTTATTTTATTTGTTAATATGTG
CCCAAGTACCTTGCAGAGTGCTGGCTGAGAGTTGAAAAAAGGATGGTAGGCAATATTACA
TGTGCAAAGACCCTGTAGTGATTTTGACTGAAAAAAATGCACAATGAGAGAATTGTGAAT
TTAATTTTATTTGGGGCAAAATGAAGACTGTAGCCTGGGAGACAGCCTCTCAGATGGCTG
TGAGGACTCCTCTGAAGAGATGGGCAGGGAGGTCAGTATATATATGTGATTTTAGTGAAG
GCAAGCACATACGTTAGCAGAAGGTTGCTTCTAGTCATAATAAGGCTGCTCCTAGTCACC
AGGAGCAGATGTCTCTGTTAATGATTTTAGTGCTTTTCTAGATATGAGAAGAAACAAGAA
ATTGGGCTCATAAAATCTTCCCCTGAAAAACATCTAACCATCTGAGGGCCTGTTCTGCCA
GTTTTTCCCAGAGCACAGAGTGCCTCATTCTTGACCTCTACCCTGAACTCCTTTGAGGTT
GTGTTGAAGGTCAGCGATTACAGTGGCTAGTGACTTCATCCTTGTAGAGGCAGGTGGCAA
ATGACAATTTTTCATCCACAGTGAGAAGGAACAGGATGAAAAGCAGGGTCTAAAAAAGGC
TCTTGTGAGGTTCCCGCTGTGGCACAGTGTAAGAATCCGACTCCAGCAGCTCAGGTCACT
GCAGAGGTACAGGTTTGATCCCCAGCCTGGTGCAGTGGGTTCAGGGATCCTGCATTGTCA
CAGCTGTGGCTCAGATTCACTCCCTGGCCCAGGAACTTCCTCAGGTCCAGCCATTTAAAA
AAAAAAAAAAAAAAATTGCTATTGTGGCTATAGTGGGAGAAGCATGCTAAAGCTAGAGAG
AGATCCAGAGCCTAGTCACATAAAACTTTATAGACCATGTTCAGATTCTTGTTCTTAAAA
TAAAATTCTAGGAGTGTGGAAACTACTAAAATAATTTAAGCATTGGTTAATTTAGGATTA
AAAAAAAGAAAATTCCAGTTAAACTGAGAGCTTAAATGAATGTAGATCAGTCAGGAATTC

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               179-653, gnl|bosTau2|chr1 (15984099-15983649)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               179-653, gnl|bosTau2|chr1 (15984099-15983649)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)